## gff-version 2 ## date Mon Mar 8 12:44:32 2004 ## source-version: geneid v 1.1 -- geneid@imim.es # Sequence super_15687 - Length = 322648 bps # Optimal Gene Structure. 14 genes. Score = 72.555899 # Gene 1 (Reverse). 1 exons. 4 aa. Score = 0.255631 super_15687 geneid_v1.1_fugu First 14075 14085 0.26 - 0 sc15687_fugu_1 # Gene 2 (Forward). 4 exons. 156 aa. Score = 10.117994 super_15687 geneid_v1.1_fugu First 14678 14763 2.71 + 0 sc15687_fugu_2 super_15687 geneid_v1.1_fugu Internal 25414 25638 3.84 + 1 sc15687_fugu_2 super_15687 geneid_v1.1_fugu Internal 29377 29521 5.12 + 1 sc15687_fugu_2 super_15687 geneid_v1.1_fugu Terminal 30141 30152 -1.56 + 0 sc15687_fugu_2 # Gene 3 (Forward). 4 exons. 147 aa. Score = 5.121525 super_15687 geneid_v1.1_fugu First 33714 33771 1.80 + 0 sc15687_fugu_3 super_15687 geneid_v1.1_fugu Internal 33930 34021 1.85 + 2 sc15687_fugu_3 super_15687 geneid_v1.1_fugu Internal 34738 34917 2.87 + 0 sc15687_fugu_3 super_15687 geneid_v1.1_fugu Terminal 35558 35668 -1.40 + 0 sc15687_fugu_3 # Gene 4 (Forward). 1 exons. 65 aa. Score = 1.131895 super_15687 geneid_v1.1_fugu Single 37613 37807 1.13 + 0 sc15687_fugu_4 # Gene 5 (Forward). 5 exons. 171 aa. Score = 24.149171 super_15687 geneid_v1.1_fugu First 45169 45254 3.29 + 0 sc15687_fugu_5 super_15687 geneid_v1.1_fugu Internal 55181 55224 -0.38 + 1 sc15687_fugu_5 super_15687 geneid_v1.1_fugu Internal 63434 63468 -0.38 + 2 sc15687_fugu_5 super_15687 geneid_v1.1_fugu Internal 72439 72701 22.06 + 0 sc15687_fugu_5 super_15687 geneid_v1.1_fugu Terminal 86658 86742 -0.45 + 1 sc15687_fugu_5 # Gene 6 (Forward). 5 exons. 146 aa. Score = 4.600704 super_15687 geneid_v1.1_fugu First 94005 94070 1.70 + 0 sc15687_fugu_6 super_15687 geneid_v1.1_fugu Internal 96662 96684 -0.63 + 0 sc15687_fugu_6 super_15687 geneid_v1.1_fugu Internal 96867 96981 1.73 + 1 sc15687_fugu_6 super_15687 geneid_v1.1_fugu Internal 97253 97291 0.39 + 0 sc15687_fugu_6 super_15687 geneid_v1.1_fugu Terminal 98083 98277 1.41 + 0 sc15687_fugu_6 # Gene 7 (Reverse). 2 exons. 31 aa. Score = 0.006777 super_15687 geneid_v1.1_fugu Terminal 101005 101071 -0.04 - 1 sc15687_fugu_7 super_15687 geneid_v1.1_fugu First 101387 101412 0.05 - 0 sc15687_fugu_7 # Gene 8 (Reverse). 4 exons. 216 aa. Score = 4.914638 super_15687 geneid_v1.1_fugu Terminal 107007 107141 -0.39 - 0 sc15687_fugu_8 super_15687 geneid_v1.1_fugu Internal 112363 112608 2.74 - 0 sc15687_fugu_8 super_15687 geneid_v1.1_fugu Internal 124509 124754 2.74 - 0 sc15687_fugu_8 super_15687 geneid_v1.1_fugu First 128951 128971 -0.17 - 0 sc15687_fugu_8 # Gene 9 (Forward). 7 exons. 247 aa. Score = 2.350759 super_15687 geneid_v1.1_fugu First 147098 147148 1.98 + 0 sc15687_fugu_9 super_15687 geneid_v1.1_fugu Internal 160145 160489 0.89 + 0 sc15687_fugu_9 super_15687 geneid_v1.1_fugu Internal 167139 167239 0.57 + 0 sc15687_fugu_9 super_15687 geneid_v1.1_fugu Internal 169727 169839 -0.40 + 1 sc15687_fugu_9 super_15687 geneid_v1.1_fugu Internal 179901 179954 -0.82 + 2 sc15687_fugu_9 super_15687 geneid_v1.1_fugu Internal 192505 192567 1.50 + 2 sc15687_fugu_9 super_15687 geneid_v1.1_fugu Terminal 204733 204746 -1.37 + 2 sc15687_fugu_9 # Gene 10 (Forward). 3 exons. 78 aa. Score = 0.268585 super_15687 geneid_v1.1_fugu First 206241 206251 1.03 + 0 sc15687_fugu_10 super_15687 geneid_v1.1_fugu Internal 206973 207138 2.21 + 1 sc15687_fugu_10 super_15687 geneid_v1.1_fugu Terminal 215025 215081 -2.97 + 0 sc15687_fugu_10 # Gene 11 (Reverse). 8 exons. 293 aa. Score = 5.808302 super_15687 geneid_v1.1_fugu Terminal 219577 219591 -1.55 - 0 sc15687_fugu_11 super_15687 geneid_v1.1_fugu Internal 233395 233523 0.75 - 0 sc15687_fugu_11 super_15687 geneid_v1.1_fugu Internal 242692 242781 0.26 - 0 sc15687_fugu_11 super_15687 geneid_v1.1_fugu Internal 254097 254299 3.73 - 2 sc15687_fugu_11 super_15687 geneid_v1.1_fugu Internal 254804 254976 0.73 - 1 sc15687_fugu_11 super_15687 geneid_v1.1_fugu Internal 255125 255226 0.73 - 1 sc15687_fugu_11 super_15687 geneid_v1.1_fugu Internal 259480 259628 1.68 - 0 sc15687_fugu_11 super_15687 geneid_v1.1_fugu First 268048 268065 -0.51 - 0 sc15687_fugu_11 # Gene 12 (Forward). 7 exons. 294 aa. Score = 6.102345 super_15687 geneid_v1.1_fugu First 273135 273145 0.31 + 0 sc15687_fugu_12 super_15687 geneid_v1.1_fugu Internal 285586 285793 2.12 + 1 sc15687_fugu_12 super_15687 geneid_v1.1_fugu Internal 296094 296199 -1.63 + 0 sc15687_fugu_12 super_15687 geneid_v1.1_fugu Internal 296759 296949 2.09 + 2 sc15687_fugu_12 super_15687 geneid_v1.1_fugu Internal 297764 297850 0.02 + 0 sc15687_fugu_12 super_15687 geneid_v1.1_fugu Internal 300239 300355 2.32 + 0 sc15687_fugu_12 super_15687 geneid_v1.1_fugu Terminal 312727 312888 0.87 + 0 sc15687_fugu_12 # Gene 13 (Reverse). 1 exons. 68 aa. Score = 0.481324 super_15687 geneid_v1.1_fugu Single 315686 315889 0.48 - 0 sc15687_fugu_13 # Gene 14 (Reverse). 7 exons. 329 aa. Score = 7.246249 super_15687 geneid_v1.1_fugu Terminal 316457 316645 -2.47 - 0 sc15687_fugu_14 super_15687 geneid_v1.1_fugu Internal 316831 317032 2.67 - 1 sc15687_fugu_14 super_15687 geneid_v1.1_fugu Internal 317385 317488 0.16 - 0 sc15687_fugu_14 super_15687 geneid_v1.1_fugu Internal 318013 318201 2.75 - 0 sc15687_fugu_14 super_15687 geneid_v1.1_fugu Internal 321801 321923 3.08 - 0 sc15687_fugu_14 super_15687 geneid_v1.1_fugu Internal 322075 322221 0.86 - 0 sc15687_fugu_14 super_15687 geneid_v1.1_fugu First 322606 322638 0.20 - 0 sc15687_fugu_14