Tutorials
- Quick Start
This brief tutorial introduces you to GenePattern by providing
step-by-step instructions for running an analysis and viewing
the results. In less than 10 minutes you'll run your first
analysis and review the results.
- Tutorial
A complete tutorial and on-line reference for GenePattern.
Guides
- Desktop Client Guide
Our complete user guide for the GenePattern Desktop Client.
- Web Client Guide
Our complete user guide for the GenePattern Web Client. This guide also applies to the GenePattern public server.
- Programmer's Guide
Our complete user guide for interfacing with GenePattern programmatically from Java, R and MATLAB.
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Reference
- FAQs
GenePattern frequently asked questions.
- Concepts
A brief overview of GenePattern objects and client-server architecture.
- Modules
Help documentation for all available GenePattern modules.
- File Formats
A list of the commonly used file formats in GenePattern.
- Release Notes
Release notes for current and previous versions of GenePattern.
- Archives
Archived documentation for earlier versions of GenePattern.
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