SNP Map Table: 129/Sv v.s. AKR/J

Unassigned SNPs are included in the FTP tables

Chromosome
	GenDist(avg)
		Fragment	Source	GenDist
			SnpPos	Gt:129/Sv	Gt:AKR/J
Chr1
	5.5 P
		36.MMHAP69FLD6.seq	random	6.6 P to 4.4 P
			94	A	G
	17.5 F
		MHAa78e6.seq	random	17.5 F
			120	G	T
	25.1 P
		24.MMHAP29FRH9.seq	random	25.1 P
			130	C	T
	25.5124 F
		46.MMHAP82FLH4.seq	random	25.1 F to 25.9248 F
			63	G	C
	25.9248 F
		33.MMHAP34FRC12.seq	random	25.9248 F
			117	A	G
	31.7 P
		41.MMHAP57FLF5.seq	random	31.7 P
			80	G	A
	37.2 F
		L23637	est	37.2 F
			54	C	T
	49.75 F
		31.MMHAP17FRC10.seq	random	49.2 P to 50.3 F
			148	G	A
			165	G	C
		MHAa21c3.seq	random	49.2 P to 50.3 F
			72	C	A
	51.4 F
		D1Mit53.2	genetic marker	51.4 F
			22	C	G
	59.0 F
		39.MMHAP54FLE6.seq	random	59.0 F
			59	T	C
	66.7 F
		10.MMHAP84FLD1.seq	random	66.7 F
			86	T	C
	74.3 F
		41.MMHAP84FRF11.seq	random	75.4 F to 73.2 P
			63	G	A
			67	A	G
	74.3 P
		16.MMHAP84FRF7.seq	random	74.3 P
			102	G	A
	82.0 F
		D1Mit424.1	genetic marker	82.0 F
			24	A	G
	91.75515 F
		12.MMHAP37FRD9.seq	random	91.7103 P to 91.8 F
			21	G	A
			93	G	A
			121	A	G
	91.8 F
		24.MMHAP87FRH9.seq	random	91.8 F
			70	G	A
		X04648	est	91.8 F
			75	A	C
			90	G	A
	91.8 P
		D1Mit455.1	genetic marker	91.8 P
			23	A	G
			32	C	T
			120	G	A
			194	C	T
	100.5 P
		MHAa54g11.seq	random	100.5 P
			130	C	T
			161	G	A
	101.6 F
		Z73151	est	101.6 F
			60	T	C
Chr2
	48.65 F
		Z17804	est	49.2 P to 48.1 F
			55	T	C
	50.3 F
		33.MMHAP63FLC6.seq	random	50.3 F
			52	G	A
		D43796	est	50.3 F
			28	T	C
			115	G	A
	51.4 F
		01.MMHAP26FRA7.seq	random	50.3 P to 52.5 F
			68	T	A
		01.MMHAP6FLA1.seq	random	51.4 F
			119	G	A
	52.5 F
		46.MMHAP59FLH4.seq	random	52.5 F
			124	A	T
	66.7 F
		13.MMHAP61FRE7.seq	random	66.7 F
			46	A	C
	70.58879 F
		M55669	est	74.47758 P to 66.7 F
			53	A	G
	73.2 F
		17.MMHAP71FRF8.seq	random	73.2 F
			30	C	T
			77	C	T
			79	A	G
			112	G	A
	74.3 P
		U27177	est	74.3 P
			177	A	G
	98.4 F
		24.MMHAP91FLH3.seq	random	98.4 F
			49	T	C
		U09421	est	98.4 F
			101	T	C
Chr3
	9.679 P
		11.MMHAP26FRD8.seq	random	9.679 P
			99	C	T
			125	G	T
		L11316	est	9.679 P
			158	A	G
	16.4 F
		43.MMHAP97FRG10.seq	random	16.4 F
			106	G	T
	17.5 P
		08.MMHAP18FRC8.seq	random	17.5 P
			103	C	T
		26.MMHAP20FRA11.seq	random	17.5 P
			38	T	G
			120	C	T
		44.MMHAP7FLG5.seq	random	17.5 P
			28	G	A
	25.1 P
		D3Mit52.2	genetic marker	25.1 P
			65	G	A
	29.5 P
		D3Mit281.1	genetic marker	29.5 P
			88	G	A
			118	C	T
			153	G	A
	36.1 F
		D3Mit157.2	genetic marker	36.1 F
			82	C	T
	40.4 F
		34.MMHAP22FRD10.seq	random	40.4 F
			109	T	C
		48.MMHAP22FRH12.seq	random	40.4 P to 40.4 F
			56	C	A
	47.0 F
		D3Mit195.2	genetic marker	47.0 F
			35	G	A
			76	A	G
	47.55 F
		08.MMHAP28FRC8.seq	random	47.0 P to 48.1 F
			50	A	G
			123	A	T
	49.2 F
		D3Mit160.2	genetic marker	49.2 F
			82	G	A
		M63961	est	49.2 F
			124	A	G
Chr4
	18.6 F
		19.MMHAP88FRG7.seq	random	18.6 F
			56	G	A
	23.0 P
		09.MMHAP37FRC9.seq	random	23.0 P
			96	T	C
	30.6 P
		17.MMHAP91FLF2.seq	random	30.6 P
			20	G	A
			126	T	A
	31.15 F
		34.MHAa65T_M13Rev.seq	random	30.6 F to 31.7 F
			149	C	A
	35.0 P
		MHAa54a7.seq	random	35.0 P
			83	C	T
	50.3 F
		D17899	est	50.3 F
			70	T	A
	52.5 F
		37.MMHAP88FRE10.seq	random	52.5 F
			109	G	A
	59.0 P
		37.MMHAP33FRE10.seq	random	59.0 P
			68	C	A
	61.2 F
		U51112	est	61.2 F
			52	C	T
	71.0 P
		27.MMHAP7FRA12.seq	random	71.0 P
			64	G	A
		X78339	est	71.0 P
			111	A	G
Chr5
	5.5 F
		36.MMHAP17FRD12.seq	random	5.5 F
			85	C	A
	18.6 F
		03.MMHAP95FRA9.seq	random	18.6 F
			21	C	T
		MHAa52c2.seq	random	18.6 F
			100	G	A
			121	G	A
	18.6 P
		MHAa84d6.seq	random	18.6 P
			95	T	G
			128	A	G
	25.1 F
		33.MMHAP28FLC6.seq	random	25.1 F
			122	T	C
	25.65 F
		MHAa35a12.seq	random	25.1 F to 26.2 F
			126	C	T
	27.3 F
		D43963	est	27.3 F
			80	T	C
	32.8 P
		32.MHAa56g8.seq	random	32.8 P
			57	T	C
		M86829	est	32.8 P
			60	C	T
			128	G	A
	37.75 F
		L23801	est	37.2 P to 38.3 F
			138	G	A
	66.7 F
		34.MMHAP64FRD10.seq	random	66.7 F
			42	C	T
		D5Mit33.2	genetic marker	66.7 F
			48	A	G
			86	A	T
	74.3 F
		22.MMHAP91FLH1.seq	random	74.3 F
			28	G	A
Chr6
	3.3 F
		M60493	est	3.3 F
			63	A	G
			110	G	A
		MHAa82a9.seq	random	3.3 F
			121	C	T
	6.6 F
		MHAa75g2.seq	random	6.6 F
			42	T	C
			114	G	A
			133	A	C
	21.9 F
		48.MMHAP9FRH12.seq	random	21.9 F
			20	A	G
			83	C	T
			105	C	A
	23.0 F
		36.MMHAP26FRD12.seq	random	23.0 F
			108	C	A
	29.5 F
		26.MMHAP36FLA5.seq	random	29.5 F
			157	G	T
	40.4 F
		20.MMHAP85FLG2.seq	random	40.4 P to 40.4 F
			137	G	A
		MHAa54c9.seq	random	40.4 F to 40.4 P
			128	G	A
	42.6 F
		44.MMHAP85FLG5.seq	random	41.5 F to 43.7 F
			63	A	G
	43.7 P
		44.MMHAP27FRG11.seq	random	43.7 P
			121	A	G
	45.9 P
		15.MHAa10f3.seq	random	45.9 P
			90	T	C
	47.0 F
		28.MMHAP6FRB10.seq	random	47.0 F
			62	C	T
			118	C	A
		30.MMHAP30FLB6.seq	random	47.0 F
			131	T	C
		32.MMHAP4FRC11.seq	random	47.0 F
			119	T	C
	49.2 F
		16.MMHAP67FLF1.seq	random	49.2 F
			49	C	T
			85	A	C
	63.4 F
		03.MMHAP54FRA9.seq	random	63.4 F to 63.4 P
			52	G	T
		35.MMHAP94FLD5.seq	random	63.4 F to 63.4 P
			104	C	T
	63.4 P
		D6Mit371.4	genetic marker	63.4 P
			34	A	G
			73	A	G
	65.05 F
		MHAa52a5.seq	random	63.4 P to 66.7 F
			36	T	C
			110	T	C
	65.6 P
		D6Mit201.2	genetic marker	65.6 P
			67	A	G
	66.7 F
		12.MMHAP34FLD3.seq	random	66.7 F
			35	G	A
		M23236	est	66.7 F to Tel
			98	T	A
Chr7
	5.5 F
		M21856	est	5.5 F
			103	T	A
	12.0 F
		26.MMHAP57FLA5.seq	random	12.0 F
			106	T	C
			125	C	A
		MHAa20d2.seq	random	12.0 F
			95	A	C
	15.3 F
		23.MMHAP35FRH8.seq	random	15.3 F
			48	C	G
			55	G	T
		D17813	est	15.3 F
			98	T	C
			131	A	G
	18.6 F
		D7Mit27.2	genetic marker	18.6 F
			73	A	T
		D7Mit28	genetic marker	18.6 F
			58	T	A
			80	A	G
			100	C	T
		D7Mit29	genetic marker	18.6 F
			150	T	C
		X94616	est	18.6 F
			51	T	C
	18.6 P
		D19306	est	18.6 P
			143	C	T
	21.3 F
		U28217	est	18.6 F to 24.0 P
			141	G	A
	21.35 F
		20.MMHAP7FLG2.seq	random	20.8 F to 21.9 F
			54	T	A
	25.1 F
		23.MMHAP64FLH2.seq	random	25.1 F
			62	C	T
			125	C	T
	25.1 P
		D7Mit195.2	genetic marker	25.1 P
			67	G	A
	26.2 F
		04.MMHAP71FRB7.seq	random	26.2 F
			111	A	G
			117	G	A
			139	A	G
		12.MMHAP70FRD9.seq	random	26.2 F
			44	C	T
			80	C	G
		14.MMHAP22FRE8.seq	random	26.2 F
			38	T	C
		33.MMHAP27FRC12.seq	random	26.2 F
			77	G	T
		MHAa54e9.seq	random	26.2 F
			37	T	C
	30.6 F
		Results_ER_8_28_95_1___169.seq	random	30.6 F
			23	G	T
			48	A	G
	33.9 F
		20.MMHAP4FRG8.seq	random	33.9 F
			40	G	A
			101	A	G
			126	C	T
	41.5 F
		17.MMHAP44FLF2.seq	random	41.5 F
			53	G	A
		31.MMHAP26FRC10.seq	random	41.5 F
			40	T	G
			76	A	G
		36.MMHAP70FLD6.seq	random	41.5 F
			46	C	G
			67	G	A
	42.6 F
		46.MMHAP57FLH4.seq	random	42.6 F
			71	C	T
			133	G	T
		D18377	est	42.6 F
			69	G	C
			130	T	C
	49.2 P
		21.MMHAP6FLG3.seq	random	49.2 P
			74	C	T
	49.75 P
		07.MMHAP85FRC7.seq	random	49.2 P to 50.3 P
			73	A	G
			142	T	C
Chr8
	0.55 P
		28.MMHAP45FLB4.seq	random	0.0 P to 1.1 P
			107	A	G
			111	G	T
		MHAa28g7.seq	random	0.0 P to 1.1 P
			72	G	A
	2.75 P
		MHAa54e7.seq	random	1.1 P to 4.4 P
			172	G	A
	4.4 F
		11.MMHAP87FLD2.seq	random	4.4 F
			26	G	A
		32.MMHAP64FRC11.seq	random	4.4 F
			83	T	C
		46.MHAa63h10.seq	random	4.4 F
			63	A	G
			109	A	G
	31.7 F
		01.MMHAP58FLA1.seq	random	31.7 F
			43	A	C
	35 F
		U13838	est	35.0 F to 35.0 P
			25	A	G
	44.8 F
		36.MMHAP61FRD12.seq	random	44.8 F
			31	T	C
	73.75 F
		14.MMHAP71FRE8.seq	random	73.2 F to 74.3 F
			46	T	G
Chr9
	4.4 P
		19.MMHAP29FRG7.seq	random	4.4 P
			31	A	G
	6.6 F
		34.MMHAP23FLD4.seq	random	6.6 F
			106	A	G
	13.1 F
		28.MMHAP56FRB10.seq	random	13.1 F
			76	G	A
			147	A	G
	17.5 F
		D9Mit286.1	genetic marker	17.5 F
			44	G	A
	20.8 F
		Y00635	est	20.8 F to 20.8 P
			135	G	A
	39.3 F
		X99273	est	39.3 F to 39.3 P
			29	C	T
	41.5 F
		40.MMHAP66FLF4.seq	random	41.5 F
			89	T	C
		MHAa52b7.seq	random	41.5 F
			60	T	C
		U49739	est	41.5 F
			29	C	T
	56.8 P
		04.MMHAP88FRB7.seq	random	56.8 P
			52	C	A
		32.MMHAP63FLC5.seq	random	56.8 P
			48	C	T
			152	A	G
Chr10
	5.5 F
		21.MMHAP26FLG3.seq	random	5.5 F to 5.5 P
			31	T	C
			42	G	A
			68	A	G
	8.7 F
		41.MMHAP61FRF11.seq	random	8.7 F
			30	C	T
	16.4 F
		L10106	est	16.4 F
			140	G	A
	63.4 P
		14.MMHAP61FLE2.seq	random	63.4 P
			28	T	C
		D16333	est	63.4 P
			39	C	T
Chr11
	2.2 F
		09.MMHAP48FLC3.seq	random	2.2 F
			100	A	C
	8.7 P
		MDB0504	est	8.7 P
			56	A	G
	13.1 F
		21.MMHAP67FLG3.seq	random	13.1 F
			49	C	G
		46.MMHAP86FRH10.seq	random	13.1 F
			20	T	C
		M84746	est	13.1 F
			57	C	T
			107	G	A
			108	G	A
	19.7 F
		32.MMHAP9FLC5.seq	random	19.7 F
			136	A	G
	20.8 F
		42.MMHAP50FRF12.seq	random	20.8 F
			24	T	G
	25.1 P
		D11Mit310.1	genetic marker	25.1 P
			44	C	A
	26.75 F
		15.MMHAP89FLE3.seq	random	26.2 P to 27.3 F
			120	G	A
	29.5 F
		21.MMHAP66FLG3.seq	random	29.5 F
			68	T	C
		U21226	est	29.5 F
			117	G	A
	39.3 F
		22.MMHAP12FRH7.seq	random	39.3 F
			109	T	C
		MHAa67c11.seq	random	39.3 F
			26	T	A
	43.7 F
		38.MMHAP58FLE5.seq	random	43.7 F
			56	C	T
	43.7 P
		D11Mit324.2	genetic marker	43.7 P
			67	G	A
	44.8 F
		D11Mit326.1	genetic marker	44.8 F
			82	A	G
	53.6 P
		03.MMHAP28FRA9.seq	random	53.6 P
			112	C	T
		34.MHAa63g10.seq	random	53.6 P
			41	G	A
			102	C	T
	55.75 F
		45.MMHAP33FRG12.seq	random	53.6 F to 57.9 F
			35	G	A
	59.0 F
		X06762	est	59.0 F
			134	A	G
	61.2 F
		46.MMHAP76FLH4.seq	random	62.3 F to 60.1 P
			97	A	G
			176	A	G
		MHAa81g3.seq	random	62.3 F to 60.1 P
			86	C	G
	62.3 F
		D11Mit123.3	genetic marker	62.3 F
			58	A	G
	71 F
		MHAa8h1.seq	random	71.0 F to 71.0 P
			26	T	C
Chr12
	2.75 F
		10.MHAa91e10.seq	random	2.2 F to 3.3 F
			51	G	A
			85	C	T
			135	A	G
	5.5 F
		MHAa82a4.seq	random	5.5 F
			116	G	A
	16.4 F
		13.MMHAP22FRE7.seq	random	16.4 F
			52	A	G
			130	G	A
	17.5 F
		34.MHAa56g10.seq	random	17.5 F
			29	G	A
			47	T	C
		X57983	est	17.5 F
			31	T	G
	18.6 F
		10.MMHAP34FLD1.seq	random	18.6 F
			99	T	C
		36.MMHAP70FRD12.seq	random	18.6 F
			120	T	C
	23.0 F
		Z11664	est	23.0 F
			102	A	G
	36.1 F
		Z46227	est	36.1 F
			140	C	T
	41.5 F
		12.MMHAP91FLD3.seq	random	41.5 F
			140	T	G
	44.8 F
		30.MMHAP12FLB6.seq	random	44.8 P to 44.8 F
			24	T	G
			50	A	G
			80	T	C
			113	A	G
	51.4 P
		D12Mit17.1	genetic marker	51.4 P
			106	T	C
	60.1 P
		D12Mit41.1	genetic marker	60.1 P
			88	G	T
Chr13
	2.2 F
		22.MHAa10f10.seq	random	2.2 F
			19	T	C
			36	A	G
		L17324	est	2.2 F
			25	C	A
		MHAa81e12.seq	random	2.2 F
			87	C	T
		MHAa87h6.seq	random	2.2 P to 2.2 F
			59	T	A
		U52461	est	2.2 F
			125	G	A
	6.6 F
		22.MMHAP67FRH7.seq	random	6.6 F to 6.6 P
			101	G	A
	7.7 F
		MHAa67f1.seq	random	7.7 F
			65	G	A
			146	G	A
	15.3 F
		20.MMHAP22FRG8.seq	random	15.3 P to 15.3 F
			39	C	A
			91	G	T
	24.0 F
		30.MMHAP28FLB6.seq	random	24.0 F
			38	T	G
		34.MMHAP35FRD10.seq	random	24.0 F
			70	G	A
		41.MMHAP83FLF5.seq	random	24.0 F
			42	C	T
	25.1 F
		47.MHAa95d11.seq	random	25.1 F
			33	G	A
	31.7 P
		D13Mit104.2	genetic marker	31.7 P
			63	A	G
	32.8 F
		M80360	est	32.8 P to 32.8 F
			88	C	T
	37.2 F
		11.MMHAP69FLD2.seq	random	37.2 F
			31	T	C
	37.75 F
		06.MMHAP34FLB3.seq	random	37.2 F to 38.3 F
			61	G	T
	40.4 F
		44.MMHAP88FRG11.seq	random	40.4 F
			45	A	G
Chr14
	0.0 P
		30.MMHAP88FRB12.seq	random	0.0 P
			29	T	C
	2.2 F
		MHAa7c2.seq	random	2.2 F
			90	A	G
	19.7 F
		46.MHAa90d10.seq	random	19.7 F to 19.7 P
			34	A	G
	51.95 F
		41.MMHAP31FLF5.seq	random	51.4 F to 52.5 F
			69	G	A
			126	A	T
			134	T	C
	52.5 F
		06.MMHAP59FLB3.seq	random	52.5 F
			128	A	G
		09.MMHAP86FLC3.seq	random	52.5 F
			49	G	C
			96	T	A
			98	T	A
		MHAa70g10.seq	random	52.5 F
			117	A	G
	63.4 F
		17.MMHAP9FLF2.seq	random	63.4 F
			24	A	T
	69.9 F
		MHAa67g1.seq	random	69.9 F
			101	G	A
Chr15
	5.5 F
		42.MMHAP59FLF6.seq	random	5.5 F
			36	A	G
	6.6 F
		02.MMHAP86FRA8.seq	random	6.6 F
			59	A	G
			146	C	T
	13.65 F
		02.MMHAP94FLA2.seq	random	13.1 F to 14.2 F
			131	C	T
	14.2 F
		X97817	est	14.2 F
			40	A	G
	15.3 F
		U28726	est	14.2 F to 16.4 F
			80	A	G
		U50631	est	14.2 F to 16.4 F
			111	A	G
	15.85 F
		45.MMHAP33FLG6.seq	random	15.3 P to 16.4 F
			86	T	C
	16.4 F
		44.MHAa63d8.seq	random	16.4 F
			30	A	G
		mHAa57c12.seq	random	16.4 F to 16.4 P
			41	T	A
	17.5 F
		02.MMHAP64FRA8.seq	random	17.5 P to 17.5 F
			37	G	A
			77	G	A
			121	T	C
	29.5 F
		03.MMHAP35FRA9.seq	random	29.5 F
			50	G	T
	32.8 F
		MHAa54d6.seq	random	32.8 F
			40	G	C
			69	C	A
	35.0 F
		M64849	est	35.0 F
			99	T	C
			123	G	C
	44.25 P
		10.MMHAP30FLD1.seq	random	42.6 P to 45.9 P
			79	T	C
	56.8 F
		10.MMHAP5FLD1.seq	random	56.8 F
			143	A	G
	59 F
		M95545	est	57.9 F to 60.1 F
			48	C	T
Chr16
	29.5 F
		46.MMHAP31FLH4.seq	random	29.5 P to 29.5 F
			68	A	T
			90	C	T
	48.65 F
		34.MMHAP94FRD10.seq	random	45.9 F to 51.4 P
			57	T	C
			73	A	G
Chr17
	6.88799 P
		MHAa34f3.seq	random	6.88799 P
			22	T	A
	10.35 F
		19.MMHAP33FRG7.seq	random	9.8 F to 10.9 F
			86	G	A
		35.MMHAP28FRD11.seq	random	9.8 F to 10.9 F
			78	C	G
		M55637	est	9.8 F to 10.9 F
			58	A	G
			97	C	T
	12.0 P
		D17Mit264.1	genetic marker	12.0 P
			32	T	A
			68	G	A
	14.2 F
		D18369	est	14.2 F
			121	A	T
	33.9 F
		30.MMHAP66FLB6.seq	random	33.9 F
			130	C	T
		mHAa21e8.seq	random	33.9 F to 33.9 P
			155	G	T
	50.3 P
		D17Mit123.2	genetic marker	50.3 P
			26	T	G
Chr18
	4.4 P
		25.MMHAP80FLA4.seq	random	4.4 P
			140	T	C
	9.8 F
		14.MMHAP9FRE8.seq	random	9.8 F
			85	T	C
	15.3 F
		12_5_2_2.seq	random	15.3 F
			49	C	T
			134	G	C
		9_15_65lon.seq	random	15.3 F
			96	A	G
	15.85 F
		Results_ER_8_28_95_2_26.seq	random	15.3 F to 16.4 F
			82	T	C
			142	C	T
	19.7 F
		MHAa30e3.seq	random	19.7 F to 19.7 P
			63	A	G
	26.2 F
		X76295	est	26.2 F
			29	A	G
	31.7 F
		41.MMHAP54FLF5.seq	random	31.7 F
			90	A	G
	37.2 P
		D18Mit216.1	genetic marker	37.2 P
			23	T	C
Chr19
	17.5 F
		08.MMHAP17FRC8.seq	random	17.5 F
			104	T	C
	18.6 F
		D19Mit99.2	genetic marker	18.6 F
			40	A	G
	34.45 F
		26.MMHAP54FLA5.seq	random	35.0 F to 33.9 P
			126	C	T
	35.0 F
		MHAa67a4.seq	random	35.0 F
			37	T	C
			94	A	G
	57.9 F
		X84651	est	57.9 F
			148	G	A
ChrX
	21.9 F
		34.MMHAP28FLD4.seq	random	21.9 F
			151	C	T
	29.5 P
		12_5_11_6.seq	random	29.5 P
			73	A	G

For further information contact:

Kerstin Lindblad-Toh