SNP Map Table: A/J v.s. C3H/HeJ

Unassigned SNPs are included in the FTP tables

Chromosome
GenDist(avg)
FragmentSourceGenDist
SnpPosGt:A/JGt:C3H/HeJ
Chr1
25.1 P
24.MMHAP29FRH9.seqrandom25.1 P
130CT
54.6 F
41.MMHAP6FLF5.seqrandom54.6 F
123GA
57.9 F
19.MMHAP66FLG1.seqrandom57.9 F
66GA
MHAa27a6.seqrandom57.9 F
67TC
91.75515 F
12.MMHAP37FRD9.seqrandom91.7103 P to 91.8 F
48GA
93AG
121GA
94.0 F
X92969est94.0 F
36CT
46AG
91TC
101.6 F
21.MMHAP97FRG9.seqrandom101.6 F
66GA
Z73151est101.6 F
60CT
Chr2
7.7 F
D2Mit314Sgenetic marker7.7 F
75TC
D2Mit358Sgenetic marker7.7 F
93GT
7.7 P
U22339est7.7 P
140CG
26.75 F
30.MMHAP97FRB12.seqrandom26.2 F to 27.3 P
95CT
38.3 F
41.MMHAP25FRF11.seqrandom38.3 F
69AG
44.8 F
X60034est44.8 F
138GT
50.3 F
33.MMHAP63FLC6.seqrandom50.3 F
52GA
D2Mit438.1genetic marker50.3 F
81GT
D43796est50.3 F
28TC
115GA
MHAa20b4.seqrandom50.3 F
23GC
50.3 P
Results_ER_9_5_95_41.seqrandom50.3 P
170AG
51.4 F
01.MMHAP26FRA7.seqrandom50.3 P to 52.5 F
68TA
51.95 F
D38218est52.5 P to 51.4 F
38CT
52.45 P
34.MMHAP46FRD10.seqrandom40.4 P to 64.5 P
40GA
52.5 F
44.MMHAP79FLG5.seqrandom52.5 P to 52.5 F
164GA
55.7 F
38.MMHAP33FRE11.seqrandom55.7 F
128AG
59.0 F
11.MMHAP44FRD8.seqrandom59.0 F
28GA
11.MMHAP87FRD8.seqrandom59.0 F
50CT
59.55 F
X80169est59.0 F to 60.1 F
81TC
60.1 F
D2Mit399.1genetic marker60.1 F
39TC
61.2 F
X01450est61.2 F
118AT
73.2 F
17.MMHAP71FRF8.seqrandom73.2 F
30TC
77TC
79GA
112AG
83.65 F
27.MMHAP64FLA6.seqrandom83.1 F to 84.2 F
54AG
Chr3
17.5 P
08.MMHAP18FRC8.seqrandom17.5 P
103TC
26.MMHAP20FRA11.seqrandom17.5 P
120TC
44.MMHAP7FLG5.seqrandom17.5 P
56AG
25.1 P
10.MMHAP71FRD7.seqrandom25.1 P
60CT
49.2 F
M63961est49.2 F
46AG
64.5 P
D3Mit323.1genetic marker64.5 P
19AT
Chr4
3.3 F
X61397est3.3 F
124AG
31.15 F
34.MHAa65T_M13Rev.seqrandom30.6 F to 31.7 F
149CA
31.7 F
33.MMHAP15FLC6.seqrandom31.7 F
87TA
X03687est31.7 F to 31.7 P
36CT
108GT
35 P
13.MMHAP64FLE1.seqrandom33.9 P to 36.1 P
30AG
81AT
50.3 F
D17899est50.3 F
70TA
52.5 F
37.MMHAP88FRE10.seqrandom52.5 F
138CT
53.6 F
41.MMHAP25FLF5.seqrandom53.6 F
104GT
54.6 F
18.MMHAP82FLF3.seqrandom54.6 F
70AT
71.0 P
46.MHAa56h10.seqrandom71.0 P
87AT
Chr5
8.7 F
32.MMHAP62FLC5.seqrandom8.7 F
96TC
27.3 F
D43963est27.3 F
80TC
160AG
32.8 P
M86829est32.8 P
60CT
128GA
37.75 F
L23801est37.2 P to 38.3 F
135GT
38.3 P
D5Mit115genetic marker38.3 P
33AT
40.4 F
12.MMHAP17FRD9.seqrandom40.4 F
23CT
48.65 F
08.MMHAP59FRC8.seqrandom48.1 F to 49.2 F
57GA
49.23689 P
mHAa21e7.seqrandom54.77378 P to 43.7 P
154AG
Chr6
3.3 F
06.MMHAP84FRB9.seqrandom3.3 F to 3.3 P
64GA
3.3 P
03.MMHAP86FRA9.seqrandom3.3 P
38CA
6.6 F
MHAa75g2.seqrandom6.6 F
42CT
114AG
133CA
12.0 P
U20371est12.0 P
136TG
13.1 P
D6Mit183.1genetic marker13.1 P
81CT
18.6 F
29.MHAa92c5.seqrandom18.6 F
21CT
36AT
32.MMHAP88FLC5.seqrandom18.6 F
49AG
31.7 P
D6Mit365.3genetic marker31.7 P
48AT
36.9555 P
28.MMHAP38FRB10.seqrandom40.011 P to 33.9 P
20TA
102AG
124AC
42.6 F
44.MMHAP85FLG5.seqrandom41.5 F to 43.7 F
63AG
45.9 P
15.MHAa10f3.seqrandom45.9 P
90TC
47.0 F
28.MMHAP6FRB10.seqrandom47.0 F
62CT
118CA
30.MMHAP30FLB6.seqrandom47.0 F
131TC
32.MMHAP4FRC11.seqrandom47.0 F
119TC
49.2 F
16.MMHAP67FLF1.seqrandom49.2 F
49CT
63.4 F
03.MMHAP54FRA9.seqrandom63.4 F to 63.4 P
52GT
35.MMHAP94FLD5.seqrandom63.4 F to 63.4 P
104CT
65.6 F
15.MMHAP6FLE3.seqrandom65.6 F
62GA
137CT
Chr7
1.1 F
27.MMHAP70FLA6.seqrandom1.1 F to 1.1 P
120AT
12.0 F
26.MMHAP57FLA5.seqrandom12.0 F
125AC
33.MMHAP5FLC6.seqrandom12.0 F
77AG
15.3 F
23.MMHAP35FRH8.seqrandom15.3 F
48GC
55TG
D17813est15.3 F
98CT
131GA
U53591est15.3 F
64GT
26.2 F
14.MMHAP22FRE8.seqrandom26.2 F
22GA
38TC
30.6 F
D63644est30.6 F
60CT
33.9 F
21.MMHAP61FLG3.seqrandom33.9 F
84AG
35.0 P
MHAa54h10.seqrandom35.0 P
57GA
89AG
37.2 F
26.MMHAP94FLA5.seqrandom37.2 F
55TC
63AG
75GA
37.2 P
17.MMHAP70FRF8.seqrandom37.2 P
178AG
40.95 F
41.MMHAP64FLF5.seqrandom39.3 F to 42.6 F
45TC
91TC
41.5 F
17.MMHAP44FLF2.seqrandom41.5 F
26TC
61CA
42.6 F
D18377est42.6 F
69CG
130CT
45.9 F
U47106est45.9 F
24CT
47.55 F
12_5_1_1.seqrandom45.9 F to 49.2 F
132GA
Chr8
31.7 F
01.MMHAP58FLA1.seqrandom31.7 F
43AC
35 F
U13838est35.0 F to 35.0 P
25AG
35.0 F
D8Mit145.1genetic marker35.0 F
45GA
X76654est35.0 F
37AG
Chr10
0.55 F
43.MMHAP61FRG10.seqrandom0.0 F to 1.1 P
126GT
8.7 F
41.MMHAP61FRF11.seqrandom8.7 F
30CT
16.4 F
L10106est16.4 F
140GA
21.9 F
38.MMHAP75FRE11.seqrandom21.9 F to 21.9 P
35TC
47.0 P
28.MMHAP15FLB4.seqrandom47.0 P
128TC
MHAa67d12.seqrandom47.0 P
67TC
62.3 P
14.MMHAP32FLE2.seqrandom62.3 P
74GA
94AT
63.4 P
14.MMHAP61FLE2.seqrandom63.4 P
28TC
D16333est63.4 P
39CT
Chr11
2.2 F
09.MMHAP48FLC3.seqrandom2.2 F
100AC
8.7 P
MDB0504est8.7 P
56GA
9.8 F
32.MMHAP26FRC11.seqrandom9.8 F
143TC
13.1 F
21.MMHAP67FLG3.seqrandom13.1 F
49GC
46.MMHAP86FRH10.seqrandom13.1 F
20TC
M84746est13.1 F
70TG
39.3 F
22.MMHAP12FRH7.seqrandom39.3 F
109TC
MHAa67c11.seqrandom39.3 F
26TA
59.0 F
X06762est59.0 F
134GA
61.2 F
L12687est61.2 F
128TC
62.3 F
D11Mit123.3genetic marker62.3 F
58GA
D11Mit59.2genetic marker62.3 F
56AC
71 F
MHAa8h1.seqrandom71.0 F to 71.0 P
26CT
Chr12
3.3 F
D12Mit209.2genetic marker3.3 F
97CT
3.3 P
47.MMHAP44FLH5.seqrandom3.3 P
36GT
59CT
57.35 F
M86750est56.8 F to 57.9 F
34GA
74TC
60.1 P
D12Mit41.1genetic marker60.1 P
88TG
Chr13
24.0 F
30.MMHAP28FLB6.seqrandom24.0 F
69AG
34.MMHAP35FRD10.seqrandom24.0 F
39AG
70GA
41.MMHAP83FLF5.seqrandom24.0 F
42TC
25.1 F
31.MMHAP76FRC10.seqrandom25.1 F
154AC
47.MHAa95d11.seqrandom25.1 F
33GA
31.7 P
D13Mit104.2genetic marker31.7 P
63AG
37.75 F
06.MMHAP34FLB3.seqrandom37.2 F to 38.3 F
61GT
39.3 P
45.MMHAP5FRG12.seqrandom39.3 P
51TA
40.4 F
44.MMHAP88FRG11.seqrandom40.4 F
45GA
50.3 P
D13Mit150.2genetic marker50.3 P
53GA
53.6 F
09.MMHAP94FLC3.seqrandom53.6 F
70AG
Chr14
0.0 P
30.MMHAP88FRB12.seqrandom0.0 P
29CT
2.2 F
MHAa7c2.seqrandom2.2 F
90GA
38.3 F
19.MHAa43d7.seqrandom38.3 F
48AC
84GT
63.4 F
17.MMHAP9FLF2.seqrandom63.4 F
24TA
Chr15
5.5 F
42.MMHAP59FLF6.seqrandom5.5 F
36AG
10.9 F
03.MMHAP70FRA9.seqrandom10.9 F
25TA
50GA
81GC
98TC
13.65 F
02.MMHAP94FLA2.seqrandom13.1 F to 14.2 F
131CT
14.2 F
X97817est14.2 F
40GA
16.4 F
mHAa57c12.seqrandom16.4 F to 16.4 P
41AT
17.5 F
45.MMHAP36FRG12.seqrandom17.5 F
54TC
84AT
27.3 P
D15Mit270.1genetic marker27.3 P
89AT
56.8 F
10.MMHAP5FLD1.seqrandom56.8 F
143AG
Chr16
3.3 F
20.MMHAP9FLG2.seqrandom3.3 P to 3.3 F
92CT
7.7 F
R75266est7.7 F
49AG
112AT
9.8 F
44.MMHAP75FRG11.seqrandom9.8 F
149TG
27.3 F
U19380est27.3 F
138TA
29.5 F
D16Mit138.1genetic marker29.5 F
29AG
U13263est29.5 F
26TA
33.35 F
16.MHAa89f4.seqrandom32.8 F to 33.9 F
43CT
45.9 F
MHAa21c11.seqrandom45.9 F
143TA
Chr17
6.88799 P
MHAa34f3.seqrandom6.88799 P
22TA
14.2 F
D18369est14.2 F
121AT
33.9 F
D17Mit217.3genetic marker33.9 F
27CT
109GT
50.3 P
D17Mit123.2genetic marker50.3 P
26TG
Chr18
4.4 P
25.MMHAP80FLA4.seqrandom4.4 P
140CT
9.8 F
14.MMHAP9FRE8.seqrandom9.8 F
24TC
41GT
60AG
74TA
85CT
MHAa84h6.seqrandom9.8 F
132AC
X58995est9.8 F to 9.8 P
39AT
102GT
9.8 P
21.MMHAP54FLG3.seqrandom9.8 P
24AG
40.MMHAP11FRF10.seqrandom9.8 P
101TG
14.75 F
27.MMHAP16FRA12.seqrandom14.2 F to 15.3 F
125TG
15.85 F
Results_ER_8_28_95_2_26.seqrandom15.3 F to 16.4 F
82CT
142TC
19.7 F
MHAa30e3.seqrandom19.7 F to 19.7 P
63AG
19.7 P
24.MMHAP33FRH9.seqrandom19.7 P
48GC
26.2 F
27.MMHAP68FLA6.seqrandom26.2 F
31AG
63CT
65TA
D18Mit100.2genetic marker26.2 F
61AG
31.7 F
41.MMHAP54FLF5.seqrandom31.7 F
90GA
Chr19
13.1 F
D19Mit110genetic marker13.1 F
28TG
MHAa78g8.seqrandom13.1 F
42AG
18.6 F
D19Mit99.2genetic marker18.6 F
86AG
34.45 F
20.MMHAP32FLG2.seqrandom35.0 F to 33.9 P
76CT
44.8 P
30.MMHAP84FLB6.seqrandom44.8 P
87CT
57.9 F
X84651est57.9 F
148GA

For further information contact:

Kerstin Lindblad-Toh