Center  for Genotyping and Analysis

Projected Pricing (effective July 2008)

Note: Listed prices are estimates, and are to be used for project planning purposes only. A detailed quote can be generated at the time of discussion of project initiation.

Sequenom Mass Array

hME format:

Plate cost: $961 for up to ~7 SNPs on 376 samples

iPLEX and iPLEX Gold format:

Plate cost: $1,305 for up to ~24 SNPs (iPLEX) or ~36 SNPs (iPLEX Gold) on 376 samples

The Sequenom platform process also has oligonucleotide synthesis and assay set up fees, which optionally includes pool characterization on HapMap CEU plate. These additional costs depend on the project scale, but can be roughly estimated at $25 / SNP.

 

Illumina GoldenGate and Infinium (custom and fixed content panels)

 » Custom GoldenGate SNP panels

Pricing for the Illumina Bead Lab with custom SNP panels is plate based. Use the tables below to estimate total study costs for genotyping and oligonucleotides. Note that each DNA plate can contain up to 95 samples.

Multiplex Level
(max # of SNPs)
Cost per DNA Plate
1536
$8,6031
768
$7,363
384
$6,191

1Discount possible for projects of ≥100 plates; discuss with project manager.


Number of samples
to be genotyped
Oligo Cost
(per SNP)
480
$25
960
$28
1920
$43
4800
$53
9600
$68

 

 » Illumina Fixed-content panels

Note: Listed prices are estimates, and are to be used for project planning purposes only. A detailed quote can be generated at the time of discussion of project initiation.

Pricing for Illumina fixed-content arrays is sample based and varies depending on the panel to be genotyped. The minimum number of samples accepted per project is 48. Since panel formats and content are pre-developed, there are no additional oligo costs. At present the per-sample cost is independent of sample number in the project.

 
Cost per Sample
Panel
GoldenGate Human Linkage
$251
Infinium Human Hap 370CNV (Duo)
no longer offered
Infinium Human Hap 550
no longer offered
Infinium Human Hap 610 (Quad)
$372
Infinium Human Hap 650Y
no longer offered
Infinium Human Hap 1M (Duo)
$495

» Custom Infinium iSelect SNP panels

Illumina's Infinium iSelect Custom SNP panels are priced per sample. Price depends on both the number of samples in the study, as well as the number of SNPs (Beadtypes) attempted.

The price table below reflects the cost per sample for some example combinations of samples and SNPs. For details for your particular study, please discuss with a project manager.

SNPs attempted
Samples
2304
5760
11520
7600
$174
$142
$125
16720
$267
$187
$149
28880
$392
$247
$181

 

Note: Listed prices are estimates, and are to be used for project planning purposes only. A detailed quote can be generated at the time of discussion of project initiation.

 

Affymetrix SNP arrays

Pricing for Affymetrix arrays is sample based and varies depending on array to be genotyped. Below is the total cost per sample, and assumes that a plate contains up to 95 samples. Since array format is pre-developed, there are no additional oligo costs.

 
Cost per Sample
Array
< 1 plate
< 5 plates
5 or more plates
Genome-Wide v6.0 (1 chip)
$559
$538
$5042
Genome-Wide v5.0 (1 chip)
$501
$480
$446
500K (2 chips: NspI and StyI)
$786
not available
250K (1 chip: NspI or StyI)
$393
not available
100K (2 chips)
no longer offered
2 Discount available for 10,000+ samples submitted simultaneously ; discuss with project manager.

Note: Listed prices are estimates, and are to be used for project planning purposes only. A detailed quote can be generated at the time of discussion of project initiation.

Contact

Contact information may be found here.

Forms

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