Rank Consensus Interpretation up/down num_hits score ORF Gene Description M[1] YCGT....mRYGAY Known: ABF1 down 2 87 YFL037W TUB2 beta-tubulin M[1] YCGT....mRYGAY Known: ABF1 down 2 86 YNL182C Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 2 84 YER008C SEC3 SEC3 encodes the 144 kD and 91 kD components of the Exocyst complex; the 91 kD component is a C-terminal proteolytic breakdown product of full length Sec3p M[1] YCGT....mRYGAY Known: ABF1 down 2 79 YPR169W Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 2 78 YDR361C BCP1 Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 2 71 YER111C SWI4 transcription factor M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YGL022W STT3 Putative integral ER membrane protein; subunit of the oligosaccharyltransferase complex M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YOR112W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YOR214C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YDR393W SHE9 similar to Arabidopsis Cip1, lethal when overexpressed M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YML008C ERG6 S-adenoslymethionine: delta 24-methyltransferase M[1] YCGT....mRYGAY Known: ABF1 down 1 52 YCR052W RSC6 subunit of chromatin remodeling complex M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YNL117W MLS1 carbon-catabolite sensitive malate synthase M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YER140W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YNL071W LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YMR205C PFK2 phosphofructokinase beta subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YHR196W UTP9 Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YER170W ADK2 Adenylate kinase (mitochondrial GTP:AMP phosphotransferase) M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YGR159C NSR1 nuclear localization sequence binding protein M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YLR312C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YFL044C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YPL255W BBP1 Involved in mitotic and meitoic cell cycle M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YMR309C NIP1 ~100 kDa cytoplasmic protein M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YAL042W ERV46 ER vesicle protein of 46 kDa M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YLR118C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YLR427W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YML070W DAK1 putative dihydroxyacetone kinase M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YJL167W ERG20 Farnesyl diphosphate synthetase (FPP synthetase) M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YDR088C SLU7 involved in mRNA splicing M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YBR123C TFC1 transcription factor tau (TFIIIC) subunit 95 M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YOL067C RTG1 Transcription factor (bHLH) involved in interorganelle communication between mitochondria, peroxisomes, and nucleus M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YNR053C NOG2 Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YMR310C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 51 YBL072C RPS8A Ribosomal protein S8A (S14A) (rp19) (YS9) M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YDR030C RAD28 involved in DNA repair, has WD repeats M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YKR015C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YLL012W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YNL072W RNH35 RNase H(35), a 35 kDa ribonuclease H M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YEL036C ANP1 subunit of mannosyltransferase complex M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YMR311C GLC8 Regulates activity of protein phosphatase 1, Glc7p, which is involved in proper chromosome segregation M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YCL044C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YDR430C CYM1 Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YKL127W PGM1 phosphoglucomutase, minor isoform M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YGR096W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YMR009W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 50 YBL098W BNA4 YBL098W M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YJL016W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YLR223C IFH1 has a weak RNA-dependent ATPase activity which is not specific for rRNA M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YCL030C HIS4 histidinol dehydrogenase M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YNR036C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YGR283C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YBR130C SHE3 involved in cell polarity M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YNL086W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YBR289W SNF5 subunit of the chromatin remodeling Snf/Swi complex M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YBL091C MAP2 methionine aminopeptidase 2 M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YCR031C RPS14A Ribosomal protein S14A (rp59A) M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YDR525W-A SNA2 Small integral membrane protein M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YMR226C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YBL006C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YPL029W SUV3 putative ATP-dependent helicase M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YHR110W ERP5 p24 protein involved in membrane trafficking M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YCL010C SGF29 Probable 29kKDa Subunit of SAGA histone acetyltransferase complex M[1] YCGT....mRYGAY Known: ABF1 down 1 49 YJL043W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YLR293C GSP1 GTP-binding protein M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YML013W SEL1 M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YML015C TAF11 TFIID subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YDL213C FYV14 Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YNL257C SIP3 Putative transcriptional activator M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YEL060C PRB1 vacuolar protease B M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YGL196W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YJR094C IME1 transcription factor involved in meiosis M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YDR167W TAF10 TFIID subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YNL268W LYP1 lysine permease M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YER034W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YBR026C MRF1' Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YOR230W WTM1 Transcriptional modulator M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YHR195W NVJ1 Vac8p binding protein; nucleus-vacuole junction M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YNL254C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YOR021C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YMR004W MVP1 peripheral Golgi membrane protein M[1] YCGT....mRYGAY Known: ABF1 down 1 48 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YLR399C BDF1 Bdf1p contains two bromodomains, localizes to the nucleus and to chomosomes in spread meiotic nuclei but is excluded from the nucleolus M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YNL210W MER1 encodes protein with RNA-binding motifs required for MRE2-dependent mRNA splicing M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YOL040C RPS15 40S ribosomal protein S15 (S21) (rp52) (RIG protein) M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YGL254W FZF1 putative transcription factor, has five zinc fingers M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YNL288W CAF40 CCR4 Associated Factor 40 kDa M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YIR009W MSL1 encodes YU2B, a component of yeast U2 snRNP M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YIL049W DFG10 involved in filamentous growth M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YDR408C ADE8 glycinamide ribotide transformylase M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YDR362C TFC6 91 kDa tau91 subunit of transcription factor IIIC (TFIIIC) M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YDR205W MSC2 M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YKL079W SMY1 kinesin heavy chain homolog M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YLR295C ATP14 ATP synthase subunit h M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YAL022C FUN26 predicted membrane protein M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YJL137C GLG2 glycogen synthesis initiator M[1] YCGT....mRYGAY Known: ABF1 down 1 47 YDR411C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YDR244W PEX5 69-kDa protein containing tetratricopeptide repeat (TPR) M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YMR065W KAR5 coiled-coil membrane protein M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YMR032W HOF1 SH3 domain containing-protein M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YJL109C UTP10 Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YGL189C RPS26A Ribosomal protein S26A M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YKL013C ARC19 involved in cortical actin patch integrity M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YJL184W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YMR261C TPS3 115 kD regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YGL106W MLC1 light chain for myosin Myo2p M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YGR058W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YMR202W ERG2 C-8 sterol isomerase M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YLR196W PWP1 similar to beta-transducin superfamily M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YDL194W SNF3 glucose sensor M[1] YCGT....mRYGAY Known: ABF1 down 1 46 YDL019C OSH2 Oxysterol Binding Protein M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YKL042W SPC42 component of the spindle pole body M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YLR329W REC102 23 kDa protein containing a putative leucine zipper; meiosis specific recombination protein; mRNA is induced early in sporulation M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YMR236W TAF9 TFIID subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YIL034C CAP2 beta subunit of capping protein M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YGL221C NIF3 similar to Listeria monocytogenes major sigma factor (rpoD gene product) M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YER109C FLO8 putative transcriptional activator of FLO1 M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YBR102C EXO84 Component of the exocyst complex; homolog in rat brain called rExo84. M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YJL203W PRP21 RNA splicing factor M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YOR226C ISU2 Iron-sulfur cluster nifU-like protein M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YOL117W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YDL117W CYK3 may be involved in cytokinesis M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YAL017W FUN31 Serine/threonine kinase M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YCR063W BUD31 M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YCR072C Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YPL049C DIG1 MAP kinase-associated protein M[1] YCGT....mRYGAY Known: ABF1 down 1 45 YNL208W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YHR028C DAP2 Dipeptidyl aminopeptidase B (DPAP B) M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YAL012W CYS3 cystathionine gamma-lyase M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YFL009W CDC4 part of a ubiquitin ligase complex M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YGR072W UPF3 involved in decay of mRNA containing nonsense codons M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YPR162C ORC4 56-kDa subunit of origin recognition complex (ORC) M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YPL158C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YDR204W COQ4 involved in ubiquinone biosynthesis M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YJL090C DPB11 DNA polymerase II complex M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YDR267C Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YHR065C RRP3 RRP3 is a DEAD box gene homologous to eIF-4a which encodes an RNA-dependent ATPase possessing helicase activity which is not specific for RNA M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YDL085W NDE2 Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YBR160W CDC28 M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YBR278W DPB3 C and C' subunits of DNA polymerase II M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YDL047W SIT4 type 2A related protein phosphatase M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YKR048C NAP1 nucleosome assembly protein I M[1] YCGT....mRYGAY Known: ABF1 down 1 44 YIL037C PRM2 M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YDR082W STN1 involved in telomere length regulation M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YDR363W ESC2 establishes silent chromatin M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YML037C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YCR059C YIH1 M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YEL020C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YEL020W-A TIM9 mitochondrial inner membrane translocase M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YJR115W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YIL137C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YJL112W MDV1 Involved in mitochondrial division M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YDR349C YPS7 GPI-anchored aspartic protease M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YDL230W PTP1 phosphotyrosine-specific protein phosphatase M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YCR081W SRB8 RNA polymerase II mediator subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YIL043C CBR1 cytochrome b reductase M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YOR378W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YGR055W MUP1 high affinity methionine permease M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YDR221W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YOL036W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YKL074C MUD2 involved in early pre-mRNA splicing M[1] YCGT....mRYGAY Known: ABF1 down 1 43 YOL026C Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YHR087W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YCL040W GLK1 Glucokinase M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YHR132C ECM14 Carboxypeptidase M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YGR166W KRE11 involved in cell wall biogenesis M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YER068W MOT2 putative zinc finger protein M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YNL190W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YBR170C NPL4 Suppressor of SEC63 (S.cerevisiae), novel ER translocation component M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YOR026W BUB3 cell cycle checkpoint protein M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YGL208W SIP2 component of Snf1 protein complex involved in response to glucose starvation M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YOL038W PRE6 alpha-type of subunit of 20S proteasome M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YOR084W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YDR284C DPP1 Diacylglycerol Pyrophosphate Phosphatase M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YOR363C PIP2 activator of peroxisome proliferation M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YIR022W SEC11 signal peptidase subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YOR179C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 42 YLR397C AFG2 homology to the CDC48 gene product M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YKL128C PMU1 Phospo-mutase homolog M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YKR007W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YGR088W CTT1 cytoplasmic catalase T M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YKR085C MRPL20 22.3 kDa mitochondrial ribosomal large subunit protein YmL20; homologous to L17 of E. coli M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YKL173W SNU114 U5 snRNP-specific protein related to EF-2 M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YPL209C IPL1 Protein kinase M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YER164W CHD1 transcriptional regulator M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YDR176W NGG1 transcription factor; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex M[1] YCGT....mRYGAY Known: ABF1 down 1 41 YJL054W TIM54 Translocase for the insertion of proteins into the mitochondrial inner membrane. M[1] YCGT....mRYGAY Known: ABF1 down 1 40 YMR199W CLN1 G(sub)1 cyclin M[1] YCGT....mRYGAY Known: ABF1 down 1 40 YPL145C KES1 sequence similar to Hes1p M[1] YCGT....mRYGAY Known: ABF1 down 1 40 YLR248W RCK2 Serine/threonine protein kinase M[1] YCGT....mRYGAY Known: ABF1 down 1 40 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[1] YCGT....mRYGAY Known: ABF1 down 1 40 YBR145W ADH5 alcohol dehydrogenase isoenzyme V M[1] YCGT....mRYGAY Known: ABF1 down 1 40 YKR011C TOS5 Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 39 YDR304C CPR5 Cyclophilin D, Peptidyl-prolyl cis-trans isomerase D M[1] YCGT....mRYGAY Known: ABF1 down 1 39 YCL043C PDI1 protein disulfide isomerase M[1] YCGT....mRYGAY Known: ABF1 down 1 39 YDR171W HSP42 heat shock protein similar to HSP26, involved in cytoskeleton assembly M[1] YCGT....mRYGAY Known: ABF1 down 1 39 YDR034W-B Similar to probable membrane protein YDR210W and others; Similar to YBR016W M[1] YCGT....mRYGAY Known: ABF1 down 1 39 YHR166C CDC23 Cell division cycle protein M[1] YCGT....mRYGAY Known: ABF1 down 1 39 YJR019C TES1 peroxisomal acyl-CoA thioesterase M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YMR084W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YNL080C Deletion causes slight growth defect, similar to U. maydis myp1 protein M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YDL193W Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YDL144C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YDL052C SLC1 putative 1-acyl-sn-gylcerol-3-phosphate acyl transferase M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YDL139C SCM3 Suppressor of chromosome missegregation M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YEL032W MCM3 component of DNA replication initiator complex M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YLR024C UBR2 ubiquitin-protein ligase (E3) M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YKL021C MAK11 contains four beta-transducin repeats M[1] YCGT....mRYGAY Known: ABF1 down 1 38 YDL186W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YKR041W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YER005W YND1 apyrase (NDPase/NTPase) M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YOR311C HSD1 ER membrane protein M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YBR058C-A TSC3 involved in sphingolipid biosynthesis M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YDR137W RGP1 involved in mitotic growth M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YNL124W NAF1 Nuclear assembly factor (putative) M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YLR303W MET17 O-Acetylhomoserine-O-Acetylserine Sulfhydralase M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YLR304C ACO1 Aconitase, mitochondrial M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YPR183W DPM1 dolichol phosphate mannose synthase M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YKL208W CBT1 involved in RNA splicing M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YER128W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YMR063W RIM9 involved in sporulation M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YLR385C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YKL039W PTM1 Putative membrane protein M[1] YCGT....mRYGAY Known: ABF1 down 1 37 YNL058C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YGR013W SNU71 U1 snRNP protein M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YBR201W DER1 involved in degradation in the ER M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YMR177W MMT1 (putative) mitochondrial metal transporter M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YNL016W PUB1 poly(A)+ RNA-binding protein M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YPR135W CTF4 DNA polymerase alpha binding protein M[1] YCGT....mRYGAY Known: ABF1 down 1 36 YMR081C ISF1 involved in mitochondrial RNA splicing M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YBR239C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YLR115W CFT2 Component of cleavage factor II (CF II); 105-kDa protein associated with polyadenylation factor 1 (PF I) M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YHL013C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YDR493W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YGR059W SPR3 septin protein involved in sporulation M[1] YCGT....mRYGAY Known: ABF1 down 1 35 YGR214W RPS0A Ribosomal protein S0A M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YNR054C Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YJR063W RPA12 A12.2 subunit of RNA polymerase I M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YKL134C OCT1 mitochondrial intermediate peptidase, possesses octapeptidyl amino-peptidase activity M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YPR108W RPN7 Subunit of the regulatory particle of the proteasome M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YMR128W ECM16 (putative) involved in cell wall biogenesis M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YKL125W RRN3 DNA-independent RNA Polymerase I transcription factor M[1] YCGT....mRYGAY Known: ABF1 down 1 34 YFR031C-A RPL2A Ribosomal protein L2A (L5A) (rp8) (YL6) M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YOR152C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YBL064C EC 1.11.1.- M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YGR251W Protein required for cell viability M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YOR231W MKK1 protein kinase involved in protein kinase C pathway M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YML109W ZDS2 Zds1 homolog M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YKL166C TPK3 cAMP-dependent protein kinase catalytic subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YKR058W GLG1 glycogen synthesis initiator M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YJL145W SFH5 M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YER027C GAL83 glucose repression protein, a component of the Snf1 complex M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[1] YCGT....mRYGAY Known: ABF1 down 1 33 YMR124W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YML091C RPM2 subunit of mitochondrial RNase P M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YOR090C PTC5 Type 2C Protein Phosphatase M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YJL105W SET4 M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YBL025W RRN10 Upstream activation factor subunit M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YHL010C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YPL126W NAN1 Net1-Associated Nucleolar protein 1 M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YDR210W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YPL239W YAR1 YAR1 encodes a 200-amino-acid protein with two ANK repeat motifs and an acidic C terminus rich in PEST-like sequences M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YJR126C VPS70 M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YFR009W GCN20 Member of ATP-binding cassette (ABC) family of proteins M[1] YCGT....mRYGAY Known: ABF1 down 1 32 YPL105C Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 31 YPR105C COD1 M[1] YCGT....mRYGAY Known: ABF1 down 1 31 YKL178C STE3 a factor recptor M[1] YCGT....mRYGAY Known: ABF1 down 1 31 YAL005C SSA1 Heat shock protein of HSP70 family, cytoplasmic M[1] YCGT....mRYGAY Known: ABF1 down 1 31 YHR092C HXT4 High-affinity glucose transporter M[1] YCGT....mRYGAY Known: ABF1 down 1 31 YDR432W NPL3 nuclear shuttling protein with an RNA recognition motif M[1] YCGT....mRYGAY Known: ABF1 down 1 31 YLL046C RNP1 ribonucleoprotein 1 M[1] YCGT....mRYGAY Known: ABF1 down 1 30 YGR120C SEC35 peripheral membrane protein involved in secretion M[1] YCGT....mRYGAY Known: ABF1 down 1 30 YJL149W Hypothetical ORF M[1] YCGT....mRYGAY Known: ABF1 down 1 30 YLR277C YSH1 subunit of Polyadenylation factor I (PF I) M[1] YCGT....mRYGAY Known: ABF1 down 1 30 YGR065C VHT1 H+-biotin symporter M[1] M[2] RTTACCCGRM Known: Reb1 down 2 106 YGL192W IME4 mRNA methyltransferase (putative) M[2] RTTACCCGRM Known: Reb1 down 2 97 YER067W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 2 92 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[2] RTTACCCGRM Known: Reb1 down 2 91 YNL191W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 2 91 YGR059W SPR3 septin protein involved in sporulation M[2] RTTACCCGRM Known: Reb1 down 2 89 YOR021C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 2 89 YOL138C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 2 87 YBR050C REG2 putative Glc7 regulatory subunit M[2] RTTACCCGRM Known: Reb1 down 2 84 YNL066W SUN4 Protein involved in the aging process M[2] RTTACCCGRM Known: Reb1 down 2 76 YNL196C SLZ1 Sporulation-specific protein with a leucine zipper motif M[2] RTTACCCGRM Known: Reb1 down 2 74 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[2] RTTACCCGRM Known: Reb1 down 2 73 YPL262W FUM1 mitochondrial and cytoplasmic fumarase (fumarate hydralase) M[2] RTTACCCGRM Known: Reb1 down 2 72 YDR361C BCP1 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 2 65 YJL099W CHS6 involved in chitin biosynthesis M[2] RTTACCCGRM Known: Reb1 down 1 58 YGR144W THI4 component of the biosynthetic pathway producing the thiazole precursor of thiamine M[2] RTTACCCGRM Known: Reb1 down 1 58 YOR354C MSC6 M[2] RTTACCCGRM Known: Reb1 down 1 58 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[2] RTTACCCGRM Known: Reb1 down 1 58 YGL099W LSG1 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 57 YDL208W NHP2 HMG-like nuclear protein M[2] RTTACCCGRM Known: Reb1 down 1 57 YGL067W NPY1 NADH pyrophosphatase 1 M[2] RTTACCCGRM Known: Reb1 down 1 57 YOR149C SMP3 involved in plasmid maintenance M[2] RTTACCCGRM Known: Reb1 down 1 57 YGR270W YTA7 26S proteasome ATPase M[2] RTTACCCGRM Known: Reb1 down 1 57 YMR213W CEF1 Component of a protein complex associated with the splicing factor Prp19p. M[2] RTTACCCGRM Known: Reb1 down 1 57 YPL219W PCL8 cyclin (Pho85p) M[2] RTTACCCGRM Known: Reb1 down 1 57 YJR004C SAG1 alpha-agglutinin M[2] RTTACCCGRM Known: Reb1 down 1 56 YML038C YMD8 similar to vanadate resistance protein Gog5 M[2] RTTACCCGRM Known: Reb1 down 1 56 YLR095C IOC2 ISWI One Complex M[2] RTTACCCGRM Known: Reb1 down 1 56 YMR092C AIP1 actin cortical patch component M[2] RTTACCCGRM Known: Reb1 down 1 55 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[2] RTTACCCGRM Known: Reb1 down 1 55 YBL051C PIN4 M[2] RTTACCCGRM Known: Reb1 down 1 55 YNL076W MKS1 negative regulator of Ras cAMP pathway, shares weak homology with Spt2p M[2] RTTACCCGRM Known: Reb1 down 1 55 YJR077C MIR1 Product of gene unknown M[2] RTTACCCGRM Known: Reb1 down 1 55 YOR049C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 55 YMR139W RIM11 Serine/threonine protein kinase, phosphorylates the mitotic activator IME1 M[2] RTTACCCGRM Known: Reb1 down 1 55 YNL307C MCK1 43.1 kDa Serine/threonine/tyrosine protein kinase M[2] RTTACCCGRM Known: Reb1 down 1 54 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[2] RTTACCCGRM Known: Reb1 down 1 54 YOR129C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 54 YGL245W Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 54 YGL153W PEX14 component of peroxisomal import machinery M[2] RTTACCCGRM Known: Reb1 down 1 54 YDR002W YRB1 nuclear GTPase-activating protein for Ran M[2] RTTACCCGRM Known: Reb1 down 1 54 YPL270W MDL2 ATP-binding cassette (ABC) transporter family member M[2] RTTACCCGRM Known: Reb1 down 1 54 YNL022C Non-essential protein with similarity to S. pombe hypothetical protein E349594 M[2] RTTACCCGRM Known: Reb1 down 1 54 YDR456W NHX1 Na+/H+ exchanger M[2] RTTACCCGRM Known: Reb1 down 1 54 YKL081W TEF4 Translation elongation factor EF-1gamma M[2] RTTACCCGRM Known: Reb1 down 1 54 YPL077C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 54 YEL052W AFG1 ATPase family gene M[2] RTTACCCGRM Known: Reb1 down 1 54 YGL248W PDE1 3',5'-Cyclic-nucleotide phosphodiesterase, low affinity M[2] RTTACCCGRM Known: Reb1 down 1 53 YDR030C RAD28 involved in DNA repair, has WD repeats M[2] RTTACCCGRM Known: Reb1 down 1 53 YHR154W RTT107 involved in silencing M[2] RTTACCCGRM Known: Reb1 down 1 52 YGR113W DAM1 spindle pole body protein M[2] RTTACCCGRM Known: Reb1 down 1 52 YLR207W HRD3 involved in HMG-CoA reductase degradation M[2] RTTACCCGRM Known: Reb1 down 1 52 YLL039C UBI4 ubiquitin M[2] RTTACCCGRM Known: Reb1 down 1 52 YDL139C SCM3 Suppressor of chromosome missegregation M[2] RTTACCCGRM Known: Reb1 down 1 51 YGR148C RPL24B Ribosomal protein L24B (rp29) (YL21) (L30B) M[2] RTTACCCGRM Known: Reb1 down 1 51 YOL005C RPB11 RNA polymerase II subunit, homologous to S. pombe Rpb11p subunit M[2] RTTACCCGRM Known: Reb1 down 1 51 YGR285C ZUO1 Zuotin, putative Z-DNA binding protein M[2] RTTACCCGRM Known: Reb1 down 1 51 YMR258C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 50 YDL138W RGT2 glucose permease M[2] RTTACCCGRM Known: Reb1 down 1 49 YDR091C RLI1 putative member of nontransporter group of ATP-binding cassette (ABC) superfamily M[2] RTTACCCGRM Known: Reb1 down 1 49 YLR411W CTR3 Copper Transporter M[2] RTTACCCGRM Known: Reb1 down 1 48 YMR118C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 48 YCR043C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 48 YDR144C MKC7 aspartyl protease related to Yap3p M[2] RTTACCCGRM Known: Reb1 down 1 48 YMR246W FAA4 long-chain fatty acid--CoA ligase and synthetase 4 M[2] RTTACCCGRM Known: Reb1 down 1 48 YMR247C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 48 YGR197C SNG1 involved in nitrosoguanidine resistance M[2] RTTACCCGRM Known: Reb1 down 1 48 YPL181W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 48 YPR148C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 48 YGL249W ZIP2 involved in meiotic recombination and disjunction M[2] RTTACCCGRM Known: Reb1 down 1 47 YMR183C SSO2 post-Golgi t-SNARE M[2] RTTACCCGRM Known: Reb1 down 1 47 YMR185W Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 47 YKL201C MNN4 involved in mannose metabolism M[2] RTTACCCGRM Known: Reb1 down 1 47 YLR390W ECM19 involved in cell wall biogenesis M[2] RTTACCCGRM Known: Reb1 down 1 47 YLR262C-A Similar to C. elegans protein M[2] RTTACCCGRM Known: Reb1 down 1 47 YIL074C SER33 3-phosphoglycerate dehydrogenase M[2] RTTACCCGRM Known: Reb1 down 1 46 YDL046W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 46 YDL133W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 45 YOR372C NDD1 Nuclear Division Defective 1 M[2] RTTACCCGRM Known: Reb1 down 1 45 YCR073C SSK22 protein kinase M[2] RTTACCCGRM Known: Reb1 down 1 45 YHR136C SPL2 17 kDa protein M[2] RTTACCCGRM Known: Reb1 down 1 45 YNL271C BNI1 contains formin homology domains; homologous to BNR1 (BNI1 related protein) M[2] RTTACCCGRM Known: Reb1 down 1 45 YPL028W ERG10 acetoacetyl CoA thiolase M[2] RTTACCCGRM Known: Reb1 down 1 45 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[2] RTTACCCGRM Known: Reb1 down 1 45 YNL204C SPS18 Transcription factor M[2] RTTACCCGRM Known: Reb1 down 1 45 YEL063C CAN1 arginine permease M[2] RTTACCCGRM Known: Reb1 down 1 45 YBR252W DUT1 dUTP pyrophosphatase (dUTPase) M[2] RTTACCCGRM Known: Reb1 down 1 45 YNL104C LEU4 alpha-isopropylmalate synthase (2-Isopropylmalate Synthase) M[2] RTTACCCGRM Known: Reb1 down 1 45 YJR091C JSN1 Benomyl dependent tubulin mutant M[2] RTTACCCGRM Known: Reb1 down 1 45 YBL076C ILS1 cytoplasmic isoleucyl-tRNA synthetase M[2] RTTACCCGRM Known: Reb1 down 1 45 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[2] RTTACCCGRM Known: Reb1 down 1 45 YDL125C HNT1 similarity to protein kinase C inhibitor-I M[2] RTTACCCGRM Known: Reb1 down 1 45 YOR107W RGS2 GTPase activating protein for Gpa2 M[2] RTTACCCGRM Known: Reb1 down 1 45 YML031W NDC1 Nuclear envelope protein with multiple putative transmembrane domains M[2] RTTACCCGRM Known: Reb1 down 1 45 YMR163C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 45 YEL021W URA3 orotidine-5'-phosphate decarboxylase M[2] RTTACCCGRM Known: Reb1 down 1 45 YGR112W SHY1 mitochondrial protein with homology to the mammalian SURF-1 gene M[2] RTTACCCGRM Known: Reb1 down 1 45 YER024W YAT2 carnitine acetyltransferase M[2] RTTACCCGRM Known: Reb1 down 1 45 YBL075C SSA3 heat-inducible cytosolic member of the 70 kDa heat shock protein family M[2] RTTACCCGRM Known: Reb1 down 1 45 YNL227C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 45 YOR043W WHI2 involved in growth regulation M[2] RTTACCCGRM Known: Reb1 down 1 45 YKL073W LHS1 novel member of the Hsp70 family of molecular chaperones that localizes to the lumen of the endoplasmic reticulum: M[2] RTTACCCGRM Known: Reb1 down 1 45 YDR098C GRX3 Protein with glutaredoxin activity M[2] RTTACCCGRM Known: Reb1 down 1 44 YHR169W DBP8 DEAD-box protein M[2] RTTACCCGRM Known: Reb1 down 1 44 YNL098C RAS2 Small, GTP-binding protein M[2] RTTACCCGRM Known: Reb1 down 1 44 YGR179C OKP1 Outer Kinetochore Protein M[2] RTTACCCGRM Known: Reb1 down 1 44 YFR001W LOC1 Double-stranded RNA-binding protein M[2] RTTACCCGRM Known: Reb1 down 1 44 YKL191W DPH2 diphthamide synthesis protein M[2] RTTACCCGRM Known: Reb1 down 1 44 YOR001W RRP6 involved in 5.8S rRNA processing M[2] RTTACCCGRM Known: Reb1 down 1 44 YIL061C SNP1 U1snRNP 70K protein homolog M[2] RTTACCCGRM Known: Reb1 down 1 44 YGR198W Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 44 YNL270C ALP1 Basic amino acid permease M[2] RTTACCCGRM Known: Reb1 down 1 44 YDR350C TCM10 Product of gene unknown M[2] RTTACCCGRM Known: Reb1 down 1 44 YLL038C ENT4 Ent4p M[2] RTTACCCGRM Known: Reb1 down 1 44 YDR293C SSD1 Product of gene unknown M[2] RTTACCCGRM Known: Reb1 down 1 44 YBR056W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 44 YBR057C MUM2 similar to ubiquitin C-terminal hydrolase, involved in meiosis M[2] RTTACCCGRM Known: Reb1 down 1 44 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[2] RTTACCCGRM Known: Reb1 down 1 44 YOL083W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 44 YPR118W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 44 YGL240W DOC1 component of the anaphase-promoting complex M[2] RTTACCCGRM Known: Reb1 down 1 44 YGL208W SIP2 component of Snf1 protein complex involved in response to glucose starvation M[2] RTTACCCGRM Known: Reb1 down 1 44 YKL143W LTV1 low temperature viability protein M[2] RTTACCCGRM Known: Reb1 down 1 44 YOR047C STD1 homologous to MTH1; interacts with the SNF1 protein kinase and TBP in two-hybrid and in in vitro binding studies M[2] RTTACCCGRM Known: Reb1 down 1 44 YER088C DOT6 nuclear protein with Myb domain involved in telomeric silencing M[2] RTTACCCGRM Known: Reb1 down 1 44 YBR162W-A YSY6 involved in the secretory pathway M[2] RTTACCCGRM Known: Reb1 down 1 44 YBL104C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 44 YOR048C RAT1 RNA trafficking protein; transcription activator M[2] RTTACCCGRM Known: Reb1 down 1 44 YDL156W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 44 YGR155W CYS4 Cystathionine beta-synthase M[2] RTTACCCGRM Known: Reb1 down 1 44 YNL007C SIS1 sit4 suppressor, dnaJ homolog M[2] RTTACCCGRM Known: Reb1 down 1 44 YCR018C SRD1 Transcription regulator M[2] RTTACCCGRM Known: Reb1 down 1 44 YKL146W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 44 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[2] RTTACCCGRM Known: Reb1 down 1 44 YOR264W DSE3 Daughter Specific Expression 3 M[2] RTTACCCGRM Known: Reb1 down 1 44 YGL236C MTO1 Mitochondrial Translation Optimization; Strong similarity to E. coli GidA M[2] RTTACCCGRM Known: Reb1 down 1 44 YAL017W FUN31 Serine/threonine kinase M[2] RTTACCCGRM Known: Reb1 down 1 44 YER012W PRE1 22.6 kDa proteasome subunit M[2] RTTACCCGRM Known: Reb1 down 1 44 YKL052C ASK1 Associated with Spindles and Kinetochores M[2] RTTACCCGRM Known: Reb1 down 1 43 YPL216W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YNL079C TPM1 tropomyosin I M[2] RTTACCCGRM Known: Reb1 down 1 43 YNL168C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[2] RTTACCCGRM Known: Reb1 down 1 43 YDL030W PRP9 RNA splicing factor M[2] RTTACCCGRM Known: Reb1 down 1 43 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[2] RTTACCCGRM Known: Reb1 down 1 43 YHR176W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[2] RTTACCCGRM Known: Reb1 down 1 43 YJL052W TDH1 Glyceraldehyde-3-phosphate dehydrogenase 1 M[2] RTTACCCGRM Known: Reb1 down 1 43 YOR186W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YNL321W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YLR401C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YDR239C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 43 YPL232W SSO1 post-Golgi t-SNARE M[2] RTTACCCGRM Known: Reb1 down 1 42 YIL146C ECM37 (putative) involved in cell wall biogenesis M[2] RTTACCCGRM Known: Reb1 down 1 42 YLR196W PWP1 similar to beta-transducin superfamily M[2] RTTACCCGRM Known: Reb1 down 1 42 YNL010W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 42 YJL118W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 42 YOR065W CYT1 Cytochrome c1 M[2] RTTACCCGRM Known: Reb1 down 1 42 YDR330W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 42 YGR079W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 42 YDR329C PEX3 48-kDa peroxisomal integral membrane protein M[2] RTTACCCGRM Known: Reb1 down 1 42 YBR128C APG14 involved in autophagy M[2] RTTACCCGRM Known: Reb1 down 1 42 YNL176C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 42 YGR134W CAF130 CCR4 Associated Factor 130 kDa M[2] RTTACCCGRM Known: Reb1 down 1 42 YLL028W TPO1 polyamine transport protein M[2] RTTACCCGRM Known: Reb1 down 1 42 YAL024C LTE1 putative GTP-exchange protein M[2] RTTACCCGRM Known: Reb1 down 1 42 YHR085W Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 41 YOR370C MRS6 Rab geranylgeranyltransferase regulatory subunit M[2] RTTACCCGRM Known: Reb1 down 1 41 YPR054W SMK1 MAP kinase M[2] RTTACCCGRM Known: Reb1 down 1 41 YIL002C INP51 phosphatidylinositol 4,5-bisphosphate 5-phosphatase M[2] RTTACCCGRM Known: Reb1 down 1 41 YIL003W DRE3 Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 41 YKL056C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 41 YPL239W YAR1 YAR1 encodes a 200-amino-acid protein with two ANK repeat motifs and an acidic C terminus rich in PEST-like sequences M[2] RTTACCCGRM Known: Reb1 down 1 41 YNL288W CAF40 CCR4 Associated Factor 40 kDa M[2] RTTACCCGRM Known: Reb1 down 1 41 YCR093W CDC39 nuclear protein that negatively regulates basal transcription M[2] RTTACCCGRM Known: Reb1 down 1 41 YLR094C GIS3 GIG3 suppressor M[2] RTTACCCGRM Known: Reb1 down 1 41 YCR005C CIT2 non-mitochondrial citrate synthase M[2] RTTACCCGRM Known: Reb1 down 1 41 YPL176C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 41 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[2] RTTACCCGRM Known: Reb1 down 1 41 YOR022C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 40 YNL197C WHI3 Putative RNA binding protein M[2] RTTACCCGRM Known: Reb1 down 1 40 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[2] RTTACCCGRM Known: Reb1 down 1 40 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[2] RTTACCCGRM Known: Reb1 down 1 40 YPL269W KAR9 Component of cortical adaptor complex that orients microtubules M[2] RTTACCCGRM Known: Reb1 down 1 40 YBL035C POL12 B subunit of DNA polymerase alpha-primase complex M[2] RTTACCCGRM Known: Reb1 down 1 40 YLR248W RCK2 Serine/threonine protein kinase M[2] RTTACCCGRM Known: Reb1 down 1 40 YNL091W NST1 Negative affector of Salt tolerance M[2] RTTACCCGRM Known: Reb1 down 1 40 YDR258C HSP78 Mitochondrial heat shock protein 78 kDa M[2] RTTACCCGRM Known: Reb1 down 1 40 YER164W CHD1 transcriptional regulator M[2] RTTACCCGRM Known: Reb1 down 1 40 YIL123W SIM1 (putative) invovled in control of DNA replication M[2] RTTACCCGRM Known: Reb1 down 1 40 YOR152C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 40 YOR123C LEO1 Product of gene unknown M[2] RTTACCCGRM Known: Reb1 down 1 39 YDR527W Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 39 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[2] RTTACCCGRM Known: Reb1 down 1 39 YGR085C RPL11B 60S ribosomal protein L11B (L16B) (rp39B) (YL22) M[2] RTTACCCGRM Known: Reb1 down 1 39 YHR065C RRP3 RRP3 is a DEAD box gene homologous to eIF-4a which encodes an RNA-dependent ATPase possessing helicase activity which is not specific for RNA M[2] RTTACCCGRM Known: Reb1 down 1 39 YCR011C ADP1 Active transport ATPase M[2] RTTACCCGRM Known: Reb1 down 1 39 YDL128W VCX1 vacuolar H+/Ca2+ exchanger M[2] RTTACCCGRM Known: Reb1 down 1 39 YCL016C DCC1 M[2] RTTACCCGRM Known: Reb1 down 1 39 YER083C Protein involved in cell wall function M[2] RTTACCCGRM Known: Reb1 down 1 39 YOL006C TOP1 topoisomerase I M[2] RTTACCCGRM Known: Reb1 down 1 39 YJL157C FAR1 Cdc28p kinase inhibitor M[2] RTTACCCGRM Known: Reb1 down 1 39 YOL051W GAL11 Component of the RNA polymerase II holoenzyme complex, positive and negative transcriptional regulator of genes involved in mating-type specialization M[2] RTTACCCGRM Known: Reb1 down 1 39 YNL183C NPR1 protein kinase homolog M[2] RTTACCCGRM Known: Reb1 down 1 38 YBL033C RIB1 GTP cyclohydrolase II M[2] RTTACCCGRM Known: Reb1 down 1 38 YFR051C RET2 vesicle coat component M[2] RTTACCCGRM Known: Reb1 down 1 38 YDR270W CCC2 Cu(2+)-transporting ATPase M[2] RTTACCCGRM Known: Reb1 down 1 38 YOR312C RPL20B 60S ribosomal protein L20B (L18B) M[2] RTTACCCGRM Known: Reb1 down 1 38 YLR307W CDA1 Chitin Deacetylase M[2] RTTACCCGRM Known: Reb1 down 1 38 YPL208W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 38 YGR133W PEX4 Member of ubiquitin-conjugating protein family M[2] RTTACCCGRM Known: Reb1 down 1 38 YIL126W STH1 helicase related protein, snf2 homolog M[2] RTTACCCGRM Known: Reb1 down 1 37 YML002W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 37 YDR354W TRP4 anthranilate phosphoribosyl transferase M[2] RTTACCCGRM Known: Reb1 down 1 37 YPL045W VPS16 Vacuolar sorting protein M[2] RTTACCCGRM Known: Reb1 down 1 37 YDR432W NPL3 nuclear shuttling protein with an RNA recognition motif M[2] RTTACCCGRM Known: Reb1 down 1 37 YPL180W SHD7 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 37 YDR454C GUK1 guanylate kinase M[2] RTTACCCGRM Known: Reb1 down 1 36 YLR250W SSP120 secretory protein M[2] RTTACCCGRM Known: Reb1 down 1 36 YBR199W KTR4 Putative alpha-1,2-mannosyltransferase M[2] RTTACCCGRM Known: Reb1 down 1 36 YER090W TRP2 anthranilate synthase Component I M[2] RTTACCCGRM Known: Reb1 down 1 36 YER091C MET6 vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase) M[2] RTTACCCGRM Known: Reb1 down 1 36 YDR160W SSY1 regulator of transporters M[2] RTTACCCGRM Known: Reb1 down 1 36 YGR221C TOS2 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 35 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[2] RTTACCCGRM Known: Reb1 down 1 35 YCR048W ARE1 Acyl-CoA cholesterol acyltransferase (sterol-ester synthetase) M[2] RTTACCCGRM Known: Reb1 down 1 35 YPR079W MRL1 M[2] RTTACCCGRM Known: Reb1 down 1 35 YPL137C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 35 YCL055W KAR4 transcription factor involved in karyogamy M[2] RTTACCCGRM Known: Reb1 down 1 35 YOR188W MSB1 involved in polarized growth M[2] RTTACCCGRM Known: Reb1 down 1 35 YMR002W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 35 YJL144W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 35 YJR006W HYS2 DNA polymerase delta 55 KD subunit M[2] RTTACCCGRM Known: Reb1 down 1 35 YOL012C HTZ1 An evolutionarily conserved member of the histone H2A F/Z family of histone variants M[2] RTTACCCGRM Known: Reb1 down 1 35 YPR100W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 34 YPR035W GLN1 glutamine synthetase M[2] RTTACCCGRM Known: Reb1 down 1 34 YDR213W UPC2 zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[2] RTTACCCGRM Known: Reb1 down 1 34 YMR222C FSH2 M[2] RTTACCCGRM Known: Reb1 down 1 34 YHR177W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 34 YIL162W SUC2 invertase (sucrose hydrolyzing enzyme) M[2] RTTACCCGRM Known: Reb1 down 1 34 YMR016C SOK2 displays homologies to several transcription factors M[2] RTTACCCGRM Known: Reb1 down 1 34 YER065C ICL1 isocitrate lyase M[2] RTTACCCGRM Known: Reb1 down 1 34 YKL024C URA6 uridine-monophosphate kinase (uridylate kinase) M[2] RTTACCCGRM Known: Reb1 down 1 34 YDL039C PRM7 M[2] RTTACCCGRM Known: Reb1 down 1 34 YDR518W EUG1 Protein disulfide isomerase homolog M[2] RTTACCCGRM Known: Reb1 down 1 34 YOL082W CVT19 CVT20 M[2] RTTACCCGRM Known: Reb1 down 1 33 YNL234W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 33 YNL099C OCA1 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 33 YNL100W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 33 YBR112C CYC8 Transcription regulatory protein M[2] RTTACCCGRM Known: Reb1 down 1 33 YBR173C UMP1 20S proteasome maturation factor M[2] RTTACCCGRM Known: Reb1 down 1 33 YGR217W CCH1 putative calcium channel M[2] RTTACCCGRM Known: Reb1 down 1 32 YIL143C SSL2 DNA helicase homolog; homolog of human XPBC, ERCC3 M[2] RTTACCCGRM Known: Reb1 down 1 32 YIL144W TID3 Product of gene unknown M[2] RTTACCCGRM Known: Reb1 down 1 32 YJR129C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 32 YDL234C GYP7 GTPase-activating protein M[2] RTTACCCGRM Known: Reb1 down 1 32 YGL223C COD3 Interacts with Sec35 M[2] RTTACCCGRM Known: Reb1 down 1 32 YLR035C MLH2 MutL Homolog M[2] RTTACCCGRM Known: Reb1 down 1 32 YDR497C ITR1 myo-inositol transporter M[2] RTTACCCGRM Known: Reb1 down 1 32 YOR201C PET56 Ribose methyltransferase for mitochondrial 21S rRNA M[2] RTTACCCGRM Known: Reb1 down 1 32 YPL154C PEP4 vacuolar proteinase A M[2] RTTACCCGRM Known: Reb1 down 1 32 YLR356W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 32 YJL137C GLG2 glycogen synthesis initiator M[2] RTTACCCGRM Known: Reb1 down 1 32 YBR080C SEC18 cytoplasmic protein involved in protein transport between ER and Golgi; ATPase M[2] RTTACCCGRM Known: Reb1 down 1 32 YLR268W SEC22 Synaptobrevin (v-SNARE) homolog M[2] RTTACCCGRM Known: Reb1 down 1 32 YEL001C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 32 YOR012W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 32 YPL048W CAM1 Calcium and phospholipid binding protein homologous to translation elongation factor 1-gamma (EF-1gamma) M[2] RTTACCCGRM Known: Reb1 down 1 31 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[2] RTTACCCGRM Known: Reb1 down 1 31 YNL282W POP3 RNase P and RNase MRP subunit M[2] RTTACCCGRM Known: Reb1 down 1 31 YNL092W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YJL123C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YDR398W UTP5 Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 31 YCR065W HCM1 Transcription factor (fork head domain) M[2] RTTACCCGRM Known: Reb1 down 1 31 YMR099C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YMR263W SAP30 M[2] RTTACCCGRM Known: Reb1 down 1 31 YKL035W UGP1 Uridinephosphoglucose pyrophosphorylase M[2] RTTACCCGRM Known: Reb1 down 1 31 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[2] RTTACCCGRM Known: Reb1 down 1 31 YDR530C APA2 5',5'''-P-1,P-4-tetraphosphate phosphorylase II M[2] RTTACCCGRM Known: Reb1 down 1 31 YDR051C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YNL300W TOS6 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[2] RTTACCCGRM Known: Reb1 down 1 31 YKL043W PHD1 putative transcription factor M[2] RTTACCCGRM Known: Reb1 down 1 31 YGR268C Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YMR160W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[2] RTTACCCGRM Known: Reb1 down 1 31 YDL195W SEC31 Component (p150) of COPII coat of secretory pathway vesicles M[2] RTTACCCGRM Known: Reb1 down 1 31 YLL002W RTT109 diepoxybutane and mitomycin C resistance M[2] RTTACCCGRM Known: Reb1 down 1 31 YER177W BMH1 Homolog of mammalian 14-3-3 proteins M[2] RTTACCCGRM Known: Reb1 down 1 31 YGL183C MND1 M[2] RTTACCCGRM Known: Reb1 down 1 31 YOL026C Protein required for cell viability M[2] RTTACCCGRM Known: Reb1 down 1 31 YFL008W SMC1 SMC chromosomal ATPase family member M[2] RTTACCCGRM Known: Reb1 down 1 31 YIR003W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YDL057W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YDR059C UBC5 ubiquitin-conjugating enzyme M[2] RTTACCCGRM Known: Reb1 down 1 31 YGR093W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 31 YJL034W KAR2 Homologue of mammalian BiP (GPR78) protein; member of the HSP70 gene family M[2] RTTACCCGRM Known: Reb1 down 1 31 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[2] RTTACCCGRM Known: Reb1 down 1 31 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[2] RTTACCCGRM Known: Reb1 down 1 31 YGR246C BRF1 RNA polymerase III transcription factor with homology to TFIIB M[2] RTTACCCGRM Known: Reb1 down 1 31 YIL150C DNA43 (putative) involved in DNA replication M[2] RTTACCCGRM Known: Reb1 down 1 31 YPR114W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 30 YDR054C CDC34 ubiquitin-conjugating enzyme, E2 M[2] RTTACCCGRM Known: Reb1 down 1 30 YNR051C BRE5 protein of unknown function M[2] RTTACCCGRM Known: Reb1 down 1 30 YCR060W Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 30 YNL161W CBK1 Protein kinase M[2] RTTACCCGRM Known: Reb1 down 1 30 YML058W-A HUG1 induced by DNA damage and replication arrest M[2] RTTACCCGRM Known: Reb1 down 1 30 YKL104C GFA1 Glutamine_fructose-6-phosphate amidotransferase (glucoseamine-6-phosphate synthase) M[2] RTTACCCGRM Known: Reb1 down 1 30 YDR007W TRP1 n-(5'-phosphoribosyl)-anthranilate isomerase M[2] RTTACCCGRM Known: Reb1 down 1 30 YDR171W HSP42 heat shock protein similar to HSP26, involved in cytoskeleton assembly M[2] RTTACCCGRM Known: Reb1 down 1 30 YER166W DNF1 Hypothetical ORF M[2] RTTACCCGRM Known: Reb1 down 1 30 YAL058W CNE1 Calnexin and calreticulin homolog M[2] RTTACCCGRM Known: Reb1 down 1 30 YGL011C SCL1 Proteasome subunit YC7alpha/Y8 (protease yscE subunit 7) M[2] RTTACCCGRM Known: Reb1 down 1 30 YGL012W ERG4 Sterol C-24 reductase M[2] M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 89 YNL076W MKS1 negative regulator of Ras cAMP pathway, shares weak homology with Spt2p M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 84 YPL267W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 84 YDR185C Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 82 YML094W GIM5 bovine prefoldin subunit 5 homolog (putative) M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 81 YER005W YND1 apyrase (NDPase/NTPase) M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 81 YER111C SWI4 transcription factor M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 76 YGL077C HNM1 Transporter (permease) for choline and nitrogen mustard; share homology with UGA4 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 74 YGR246C BRF1 RNA polymerase III transcription factor with homology to TFIIB M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 74 YBR265W TSC10 3-ketosphinganine reductase M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 73 YKL079W SMY1 kinesin heavy chain homolog M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 72 YLR223C IFH1 has a weak RNA-dependent ATPase activity which is not specific for rRNA M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 71 YPL045W VPS16 Vacuolar sorting protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 70 YCL014W BUD3 involved in bud site selection M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 70 YCL011C GBP2 Protein with RNA recognition motifs M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 69 YDR398W UTP5 Protein required for cell viability M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 68 YJL034W KAR2 Homologue of mammalian BiP (GPR78) protein; member of the HSP70 gene family M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 68 YFL001W DEG1 Depressed growth-rate protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 66 YGR144W THI4 component of the biosynthetic pathway producing the thiazole precursor of thiamine M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 66 YGL212W VAM7 hydrophilic protein, heptad repeat motif M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 65 YGL172W NUP49 nuclear pore complex protein with GLFG repetitive sequence motif M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 65 YJR072C Protein required for cell viability M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 64 YNL300W TOS6 Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 64 YNL124W NAF1 Nuclear assembly factor (putative) M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 63 YLR277C YSH1 subunit of Polyadenylation factor I (PF I) M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 62 YLR196W PWP1 similar to beta-transducin superfamily M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 62 YHR087W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 62 YPL067C Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 61 YLR337C VRP1 Proline-rich protein verprolin M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 61 YNL307C MCK1 43.1 kDa Serine/threonine/tyrosine protein kinase M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 60 YGR159C NSR1 nuclear localization sequence binding protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 60 YDR497C ITR1 myo-inositol transporter M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 59 YHR169W DBP8 DEAD-box protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 59 YMR303C ADH2 alcohol dehydrogenase II M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 58 YPR030W CSR2 chs5 spa2 rescue; overexpression rescues the lethality of chs5 spa2 at 37 degrees M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 58 YMR210W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 58 YGR284C ERV29 ER-Golgi transport vesicle protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 57 YNL210W MER1 encodes protein with RNA-binding motifs required for MRE2-dependent mRNA splicing M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 56 YML109W ZDS2 Zds1 homolog M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 55 YOL142W RRP40 Rrp40p M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 55 YJL051W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 54 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 54 YER139C Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 54 YOR226C ISU2 Iron-sulfur cluster nifU-like protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 53 YGR161C Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 53 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 52 YIR028W DAL4 allantoin permease M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 52 YHR204W MNL1 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 52 YKL173W SNU114 U5 snRNP-specific protein related to EF-2 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 52 YLL046C RNP1 ribonucleoprotein 1 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 52 YNR014W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 52 YDR082W STN1 involved in telomere length regulation M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 50 YOR077W RTS2 similar to mouse KIN7 protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 49 YNL142W MEP2 Ammonia transport protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 48 YKL013C ARC19 involved in cortical actin patch integrity M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 48 YOR054C Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 48 YDR160W SSY1 regulator of transporters M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 47 YOR107W RGS2 GTPase activating protein for Gpa2 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 46 YGL183C MND1 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 46 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 46 YDR176W NGG1 transcription factor; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 45 YKL045W PRI2 p58 polypeptide of DNA primase M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 45 YHR195W NVJ1 Vac8p binding protein; nucleus-vacuole junction M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 44 YJR001W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 44 YLR248W RCK2 Serine/threonine protein kinase M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 43 YGL175C SAE2 involved in meiotic recombination M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 42 YNL225C CNM67 Spindle pole body protein involved in nuclear migration M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 42 YHR127W (H)igh copy (S)uppressor of (N)34 dominant negative allele of SEC4. Suppression is very specific to this allele. It has no affect on the analogous YPT1 allele. No homology or known function. M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 42 YOR358W HAP5 Component, along with Hap2p and Hap3p, of CCAAT-binding transcription factor M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 41 YML081W Hypothetical ORF M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 40 YOR337W TEA1 Ty1 enhancer activator M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 40 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 39 YMR240C CUS1 U2 snRNP protein M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 38 YDR362C TFC6 91 kDa tau91 subunit of transcription factor IIIC (TFIIIC) M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 37 YPR047W MSF1 alpha subunit of yeast mitochondrial phenylalanyl-tRNA synthetase M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 36 YER048W-A Similar to D. melanogaster protein; weaker homology to C. elegans protein with similarity to human cdk7/cyclin H assembly factor M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 34 YOL011W PLB3 phospholipase B/lysophospholipase M[3] gcGATGAGmtgaraw Known: ESR1 GATGAG down 1 30 YER083C Protein involved in cell wall function M[3] M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 2 129 YCR011C ADP1 Active transport ATPase M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 2 108 YJL151C SNA3 Small integral membrane protein M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 2 98 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 2 97 YOL093W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 2 95 YFL037W TUB2 beta-tubulin M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 2 72 YHL025W SNF6 subunit of the chromatin remodeling Snf/Swi complex M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 71 YDL238C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 71 YMR102C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 71 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 71 YNL195C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 71 YMR185W Protein required for cell viability M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 70 YCR060W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 70 YOR337W TEA1 Ty1 enhancer activator M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 70 YGL183C MND1 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 69 YLL038C ENT4 Ent4p M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 69 YLL018C-A COX19 Cox19p (under characterization) M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 68 YKL079W SMY1 kinesin heavy chain homolog M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 68 YER178W PDA1 alpha subunit of pyruvate dehydrogenase (E1 alpha) M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 68 YOR021C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 67 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 67 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 61 YNL014W HEF3 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 60 YDR361C BCP1 Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 60 YNL270C ALP1 Basic amino acid permease M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 60 YER045C ACA1 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 58 YOL132W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 57 YDL194W SNF3 glucose sensor M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 57 YDL155W CLB3 G(sub)2-specific B-type cyclin M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 57 YJR005W APL1 beta-adaptin, large subunit of the clathrin-associated protein complex M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 57 YKR010C TOF2 topoisomerase I interacting factor 2 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 56 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 56 YJL052W TDH1 Glyceraldehyde-3-phosphate dehydrogenase 1 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 55 YOR373W NUD1 spindle pole body protein M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 55 YBR135W CKS1 subunit of the Cdc28 protein kinase M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 54 YDR034W-B Similar to probable membrane protein YDR210W and others; Similar to YBR016W M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 54 YOR083W WHI5 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 54 YIL024C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 54 YPR019W CDC54 Involved in initiation of DNA replication M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 54 YBR063C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 54 YGR141W VPS62 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 53 YML112W CTK3 CTD kinase-I gamma subunit M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 53 YOR288C MPD1 Disulfide isomerase related protein M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 49 YPR118W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 48 YGL226W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 47 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 47 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 47 YGR246C BRF1 RNA polymerase III transcription factor with homology to TFIIB M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 47 YHR176W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 47 YML058W-A HUG1 induced by DNA damage and replication arrest M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 46 YLR401C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 45 YCL011C GBP2 Protein with RNA recognition motifs M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 45 YCL014W BUD3 involved in bud site selection M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 44 YER055C HIS1 ATP phosphoribosyltransferase M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 43 YOR179C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 41 YOR178C GAC1 Regulatory subunit for Glc7p M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 40 YOR264W DSE3 Daughter Specific Expression 3 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 39 YMR042W ARG80 transcription factor M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 38 YOR002W ALG6 glucosyltransferase M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 38 YBR198C TAF5 Probable transcription-associated factor protein, probable -transducin type M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 37 YOL138C Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 37 YDL214C PRR2 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 36 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 36 YOR003W YSP3 subtilisin-like protease III M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 35 YMR017W SPO20 DBF2 Interacting Protein; SNAP 25 homolog M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 34 YER020W GPA2 nucleotide binding regulatory protein M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 31 YOL133W HRT1 subunit of Skp1-Cullin-F-box ubiquitin protein ligase (SCF) M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 31 YNL104C LEU4 alpha-isopropylmalate synthase (2-Isopropylmalate Synthase) M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 30 YPL222W Hypothetical ORF M[4] TSGGCGGCTAWW Known: Ume6/Ndt80 down 1 30 YFR016C Hypothetical ORF M[4] M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 98 YNL278W CAF120 CCR4 Associated Factor 120 kDa M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 96 YLR091W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 93 YDR437W Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 92 YNR052C POP2 Putative transcription factor M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 90 YFR029W PTR3 regulator of peptide permease M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 81 YGR059W SPR3 septin protein involved in sporulation M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 78 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 78 YOR056C NOB1 Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 76 YDR282C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 72 YNL024C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 2 68 YPL109C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 53 YFR048W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YGR201C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YIL073C SPO22 meiosis-specific phospholipase A2 homolog M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YER115C SPR6 involved in sporulation M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YPL255W BBP1 Involved in mitotic and meitoic cell cycle M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YER176W ECM32 DNA Helicase I M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YJL061W NUP82 82-kDa protein, with putative coiled-coil domain, has carboxy-terminal domain, containing heptad repeats, that binds Nsp1p; nucleoporin M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YJL210W PEX2 CH3HC4 zinc-binding integral peroxisomal membrane protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YDR503C LPP1 Lipid phosphate phosphatase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YER044C ERG28 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YGR049W SCM4 suppressor of cdc4 mutations M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YDR142C PEX7 Member of beta-transducin-related (WD-40) protein family M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YHR090C YNG2 NuA4 histone acetyltransferase complex component M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 52 YMR302C PRP12 Integral membrane mitochondrial protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 51 YKR001C VPS1 putative GTP-binding protein; similar to mammalian Mx proteins M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 51 YBR038W CHS2 chitin synthase 2 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 51 YBR050C REG2 putative Glc7 regulatory subunit M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 51 YAL025C MAK16 putative nuclear protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 51 YDL019C OSH2 Oxysterol Binding Protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 49 YJL167W ERG20 Farnesyl diphosphate synthetase (FPP synthetase) M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 49 YDL007W RPT2 (putative) 26S protease subunit M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 48 YBR256C RIB5 Riboflavin synthase alpha-chain M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 48 YJL157C FAR1 Cdc28p kinase inhibitor M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 48 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 46 YKL140W TGL1 triglyceride lipase-cholesterol esterase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 45 YDR339C Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 45 YGR203W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 45 YDR367W Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 45 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 44 YOL063C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 42 YOL135C MED7 Stoichiometric member of mediator complex M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 42 YDR443C SSN2 transcription factor M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 40 YMR099C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 40 YJR059W PTK2 putative serine)/threonine kinase involved in spermine metabolism M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 40 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 40 YFL005W SEC4 Ras-like small GTP-binding protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YDR059C UBC5 ubiquitin-conjugating enzyme M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YHR085W Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YJL118W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YGL181W GTS1 Glycine-threonine-serine repeat protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YGL017W ATE1 arginyl-tRNA-protein transferase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YER005W YND1 apyrase (NDPase/NTPase) M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YMR311C GLC8 Regulates activity of protein phosphatase 1, Glc7p, which is involved in proper chromosome segregation M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YDR222W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 39 YNL071W LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YPL097W MSY1 Tyrosyl-tRNA synthetase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YKL086W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YBR067C TIP1 cell wall mannoprotein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YOL141W PPM2 carboxy methyl transferase; homolog of PPM1 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YBR212W NGR1 negative growth regulatory protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YJL107C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YEL020C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YEL020W-A TIM9 mitochondrial inner membrane translocase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YLR399C BDF1 Bdf1p contains two bromodomains, localizes to the nucleus and to chomosomes in spread meiotic nuclei but is excluded from the nucleolus M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YCR059C YIH1 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YAL013W DEP1 regulation of phospholipid metabolism M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 38 YPL041C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YKL205W LOS1 nuclear protein LOS1 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YBR058C-A TSC3 involved in sphingolipid biosynthesis M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YPL063W Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YNL233W BNI4 Is required to link Chs3p and Chs4p to the septins M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YBL076C ILS1 cytoplasmic isoleucyl-tRNA synthetase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YGR248W SOL4 similar to SOL3 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YPR015C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YLR355C ILV5 acetohydroxyacid reductoisomerase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 37 YNL079C TPM1 tropomyosin I M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YMR010W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YOL020W TAT2 Tryptophan permease, high affinity M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YHR175W CTR2 copper transporter M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YDR075W PPH3 protein phosphatase type 2A M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YFL001W DEG1 Depressed growth-rate protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YBL034C STU1 component of the mitotic spindle M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YOR229W WTM2 Transcriptional modulator M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YNL193W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YGL208W SIP2 component of Snf1 protein complex involved in response to glucose starvation M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YBL098W BNA4 YBL098W M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YBR071W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 36 YPL204W HRR25 casein kinase I isoform M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 35 YMR259C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 35 YLL038C ENT4 Ent4p M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 35 YPR169W Protein required for cell viability M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 35 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 35 YPL164C MLH3 MutL Homolog M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YMR063W RIM9 involved in sporulation M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YHR096C HXT5 hexose transporter M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YOL001W PHO80 The Pho80p Cyclin M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YDR076W RAD55 RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YHR114W BZZ1 Myo3/5p-Bee1p-Vrp1p actin assembly complex component M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YHR115C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YHR182W Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YBL030C PET9 mitochondrial ADP/ATP translocator M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YBL031W SHE1 Product of gene unknown M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 34 YDR439W LRS4 involved in rDNA silencing M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 33 YGR010W NMA2 nicotinic acid mononucleotide adenylyltransferase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 33 YDL048C STP4 involved in tRNA splicing M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 32 YKL214C YRA2 Yeast RNA Annealing protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 32 YKL089W MIF2 centromere protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 32 YFL050C ALR2 (putative) ion transporter M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 32 YHR178W STB5 Zinc finger (6-Cys) M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 31 YLL001W DNM1 Dynamin-related protein M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 31 YLR001C Hypothetical ORF M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 30 YDL078C MDH3 malate dehydrogenase M[5] RTCACGTGV Known: Cbf1/Pho4 down 1 30 YNL103W MET4 member of the leucine zipper family of transcriptional activators M[5] M[6] WTATWTACADG Novel: Mitochondrial downstream down 4 140 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 135 YKL194C MST1 mitochondrial threonine-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 135 YKL195W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 107 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 106 YGR223C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 106 YGR222W PET54 M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 106 YKL192C ACP1 mitochondrial acyl carrier protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 105 YNR017W MAS6 23 kDa mitochondrial inner membrane protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 3 102 YBR241C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 101 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 93 YPL103C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 93 YPL104W MSD1 Aspartyl-tRNA synthetase, mitochondrial M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 92 YPL172C COX10 Putative farnesyl transferase required for heme A synthesis M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 92 YPL173W MRPL40 Mitochondrial ribosomal protein MRPL40 (YmL40) M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 92 YPL040C ISM1 nuclear encoded mitochondrial isoleucyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 88 YPL097W MSY1 Tyrosyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 86 YOR205C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 86 YOR204W DED1 ATP-dependent RNA helicase of DEAD box family M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 81 YPR133W-A TOM5 Membrane protein involved in protein translocation to the mitochondria M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 79 YNL085W MKT1 retroviral protease signature protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 79 YNL084C END3 Required for endocytosis and organization of the cytoskeleton M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 79 YGL027C CWH41 glucosidase I M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 78 YER141W COX15 cytochrome oxidase assembly factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 78 YER142C MAG1 3-methyladenine DNA glycosylase M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 78 YPR124W CTR1 Copper transport protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 78 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 78 YMR188C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 77 YKL039W PTM1 Putative membrane protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 77 YPR191W QCR2 40 kDa ubiquinol cytochrome-c reductase core protein 2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 76 YMR024W MRPL3 Mitochondrial ribosomal protein MRPL3 (YmL3) M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 76 YER080W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 76 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 75 YML025C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 75 YJR077C MIR1 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 74 YNL241C ZWF1 Glucose-6-phosphate dehydrogenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 74 YNL242W APG2 Required for sporulation. M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 73 YNL185C MRPL19 mitochondrial ribosomal protein of the large subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 73 YNL186W UBP10 predicted to encode a ubiquitin-processing protease M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 71 YHR176W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 71 YNL073W MSK1 mitochondrial lysine-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 71 YPL201C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 71 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 71 YHR009C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 70 YOR065W CYT1 Cytochrome c1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 70 YOL059W GPD2 Glycerol-3-phosphate dehydrogenase (NAD+) M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 69 YPL246C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 69 YIL070C MAM33 Mitochondrial protein involved in respiration M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 68 YHR120W MSH1 mutS homolog involved in mitochondrial DNA repair M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 67 YCL055W KAR4 transcription factor involved in karyogamy M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 67 YDR516C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 67 YDR515W SLF1 RNA binding protein with La motif M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 67 YGR081C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 67 YGR080W TWF1 Twinfilin A, an actin monomer sequestering protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 67 YKL053C-A Similar to human sequence predicted by GENSCAN M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 66 YBL071W-A Similar to Hemiascomycetous yeast protein (FEBS Lett. 487(1): 31-36 (2000)). M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 66 YGR031W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 66 YMR203W TOM40 Mitochondrial outer membrane protein; forms the outer membrane import channel M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 66 YMR204C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 66 YPL184C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 64 YLR370C ARC18 Arp2/3 Complex Subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 64 YLR369W SSQ1 mitochondrial hsp70-type molecular chaperone M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 64 YLL023C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 63 YDR116C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 63 YDR115W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 63 YNL024C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 63 YKL162C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 63 YKL163W PIR3 Protein containing tandem internal repeats M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 63 YFL037W TUB2 beta-tubulin M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 62 YCL011C GBP2 Protein with RNA recognition motifs M[6] WTATWTACADG Novel: Mitochondrial downstream down 2 62 YCL014W BUD3 involved in bud site selection M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 58 YLR204W QRI5 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 58 YLR205C HMX1 Putative heme oxygenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 57 YKL168C KKQ8 probable serine/threonine-specific protein kinase (EC 2.7.1.-) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 57 YKL170W MRPL38 mitochondrial ribosomal protein L14 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 57 YEL020C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 57 YEL020W-A TIM9 mitochondrial inner membrane translocase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 57 YMR193W MRPL24 Mitochondrial ribosomal protein MRPL24 (YmL24) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 56 YGR131W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 56 YGR132C PHB1 mitochondrial protein, prohibitin homolog; similar to S. cerevisiae Phb2p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 56 YIL093C RSM25 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 56 YJL096W MRPL49 mitochondrial ribosomal protein of the large subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YNR041C COQ2 para hydroxybenzoate: polyprenyl transferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YNR040W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YML010W SPT5 transcription factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YML009C MRPL39 Mitochondrial ribosomal protein MRPL39 (YmL39) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YMR225C MRPL44 Mitochondrial ribosomal protein MRPL44 (YmL44) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YER048W-A Similar to D. melanogaster protein; weaker homology to C. elegans protein with similarity to human cdk7/cyclin H assembly factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YGL143C MRF1 Mitochondrial polypeptide chain release factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YJL063C MRPL8 Mitochondrial ribosomal protein MRPL8 (YmL8) (E. coli L17) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YIL022W TIM44 48.8 kDa protein involved in mitochondrial protein import M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YBL038W MRPL16 Mitochondrial ribosomal protein MRPL16 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YIL006W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YOR335C ALA1 Cytoplasmic alanyl-tRNA synthetase gene M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YOR334W MRS2 splicing factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 55 YOR354C MSC6 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YDR174W HMO1 35 kDa protein belonging to the high mobility group (HMG) fanily of proteins M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YDR175C RSM24 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YDR494W RSM28 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YDR495C VPS3 vacuolar protein targeting protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YMR098C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YLR440C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YLR439W MRPL4 Mitochondrial 60S ribosomal protein L4 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YLR254C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YLR253W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YGL068W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YAL005C SSA1 Heat shock protein of HSP70 family, cytoplasmic M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 54 YHR011W DIA4 involved in invasive and pseudohyphal growth M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YHR059W FYV4 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YBR262C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YLR078C BOS1 ER-to-Golgi v-SNARE M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YLR077W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YDR042C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YDR041W RSM10 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 53 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YPL014W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YPL013C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YNL006W LST8 Protein required for transport of permeases from the Golgi to the plasma membrane M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YNL005C MRP7 Mitochondrial ribosomal protein MRP7 (YmL2) (E. coli L27) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YOR232W MGE1 GrpE homolog, mitochondrial matrix protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YDR035W ARO3 DAHP synthase; a.k.a. phospho-2-dehydro-3-deoxyheptonate aldolase, phenylalanine-inhibited; phospho-2-keto-3-deoxyheptonate aldolase; 2-dehydro-3-deoxyphosphoheptonate aldolase; 3-deoxy-D-arabine-heptulosonate-7-phosphate synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YDR036C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YNL081C Deletion causes slight growth defect, sporulation defect; similar to S. pombe 40S mitochondrial ribosomal protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YNL082W PMS1 MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YNL252C MRPL17 mitochondrial ribosomal protein of the large subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YNL253W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 52 YGL064C MRH4 mitochondrial RNA helicase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YHR146W CRP1 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YHR147C MRPL6 Mitochondrial ribosomal protein MRPL6 (YmL6) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YBR251W MRPS5 Probable mitochondrial ribosomal protein S5 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YPR047W MSF1 alpha subunit of yeast mitochondrial phenylalanyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YCR004C YCP4 FMN-binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YCR003W MRPL32 Mitochondrial ribosomal protein MRPL32 (YmL32) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YPR068C HOS1 Similar to Hda1p, Rpd3p, Hos2p, and Hos3p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YPR067W ISA2 Iron Sulfur Assembly -- IscA/NifA homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YCR069W CPR4 cyclophilin homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YCR071C IMG2 similar to Drosophila gonadal protein Z600; involved in mitochondrial DNA maitenance M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YNL294C RIM21 Regulator of IME2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YNL295W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YBR192W RIM2 Probable carrier protein, mitochondrial M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 51 YBR193C MED8 Stoichiometric member of mediator complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YOR287C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YOR286W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YDR512C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YDR511W ACN9 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YHR109W CTM1 Cytochrome c methyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YGR076C MRPL25 Mitochondrial ribosomal protein MRPL25 (YmL25) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YLR008C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YLR007W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YEL051W VMA8 vacuolar ATPase V1 domain subunit D M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YEL050C RML2 mitochondrial ribosomal protein L2 of the large subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YKL004W AUR1 involved in phospolipid metabolism M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YKL003C MRP17 Mitochondrial ribosomal protein MRP17 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 50 YGL107C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YNL069C RPL16B Ribosomal protein L16B (L21B) (rp23) (YL15) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YNL070W TOM7 translocase of the outer mito. membrane M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YER058W PET117 cytochrome c oxidase assembly factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YDR122W KIN1 Serine/threonine protein kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YDR123C INO2 helix-loop-helix protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YFR010W UBP6 (putative) ubiquitin-specific protease M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YFR011C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YHR039C MSC7 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YHR038W FIL1 Putative mitochondrial ribosome recycling factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YJL181W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YJL180C ATP12 (putative) involved F1F0-ATPase complex assembly M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 49 YDL044C MTF2 involved in mRNA splicing M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 48 YJL141C YAK1 Serine-threonine protein kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 48 YJL143W TIM17 16.5 kDa inner membrane protein required for import of mitochondrial precursor proteins M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 48 YHR005C-A MRS11 component of mitochondrial import machinery M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 48 YMR010W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 48 YGL130W CEG1 mRNA guanylyltransferase (mRNA capping enzyme), alpha subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 48 YGL129C RSM23 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YER087C-A SBH1 homologous to Sbh2p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YER087W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YKL088W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YKL087C CYT2 cytochrome c1 heme lyase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YIL020C HIS6 phosphoribosyl-5-amino-1-phosphoribosyl-4-imidazolecarboxiamide isomerase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YIL021W RPB3 45 kDa subunit of RNA polymerase II M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YHR086W NAM8 putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YIR023W DAL81 Transcriptional activator for allantoin and GABA catabolic genes, contains a Zn[2]-Cys[6] fungal-type binuclear cluster domain in the N-terminal region M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YIR024C GIF1 (putative) involved in cell cycle control M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YBR146W MRPS9 Probable mitochondrial ribosomal protein S9 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YBR233W PBP2 Homolog to human hnRNP complex K protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YGL063W PUS2 pseudouridine synthase 2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YJR034W PET191 involved in cytochrome c oxidase assembly M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YDL106C PHO2 Homeobox-domain containing transcription fractor which is a positive regulator of PHO5 and other genes. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 47 YDL107W MSS2 cox1 pre-mRNA splicing factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YDR393W SHE9 similar to Arabidopsis Cip1, lethal when overexpressed M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YCR024C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YPL029W SUV3 putative ATP-dependent helicase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YHL024W RIM4 RNA-binding protein of the RRM class (putative) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YHL023C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YPL063W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YLR026C SED5 Sed5p is a t-SNARE (soluble NSF attachment protein receptor) required in ER to Golgi transport. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YLR025W SNF7 involved in glucose derepression M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YDL045C FAD1 FAD synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YDL045W-A MRP10 homologous to Yml37p, component of the 37 S subunit of mitochondrial ribosomes M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YNL214W PEX17 23 kDa peroxisome associated protein, binds Pex14p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YNL213C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YDR493W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YPL117C IDI1 Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP isomerase) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YPL118W MRP51 Component of small subunit of the mitochondrial ribosome M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YMR100W MUB1 involved in bud site selection M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 46 YMR101C SRT1 cis-prenyltransferase homologue M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YDR310C SUM1 nuclear protein involved in silencing M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YNL306W MRPS18 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YNL305C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YCR011C ADP1 Active transport ATPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YER044C-A MEI4 mRNA is meiosis-specific and has 88 bp intron at 5' end spliced independently of MER1. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YGL208W SIP2 component of Snf1 protein complex involved in response to glucose starvation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YGR112W SHY1 mitochondrial protein with homology to the mammalian SURF-1 gene M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YLR258W GSY2 Glycogen synthase (UDP-gluocse--starch glucosyltransferase) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YLR259C HSP60 mitochondrial chaperonin, homolog of E. coli groEL protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YDR395W SXM1 Sxm1p shares similarity with Cse1p homologs including Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1; Sxm1p also shares homology with the karyopherin, Kap95p; Sxm1p is primarily a nuclear protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YDR397C NCB2 repressor of class II transcription M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YLR381W CTF3 kinetochore-related protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 45 YLR382C NAM2 mitochondrial leucyl tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YHR182W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YCL035C GRX1 Glutaredoxin M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YCL036W GFD2 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YMR013C SEC59 membrane protein required for core glycosylation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YMR012W CLU1 translation initiation factor eIF3 subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YKR058W GLG1 glycogen synthesis initiator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YDL202W MRPL11 Mitochondrial ribosomal protein MRPL11 (YmL11) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YJL066C MPM1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YBR119W MUD1 U1 snRNP A protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YBR120C CBP6 Translational activator of COB mRNA M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YLR390W ECM19 involved in cell wall biogenesis M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YDR032C PST2 Protoplasts-SecreTed protein; the gene product was detected among the proteins secreted by regenerating protoplasts M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 44 YDR031W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YKL167C MRP49 16 kDa mitochondrial ribosomal large subunit protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YJL209W CBP1 involved in control of mRNA stablility M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YJL208C NUC1 mitochondrial nuclease M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YNL178W RPS3 Ribosomal protein S3 (rp13) (YS3) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YNL177C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YGR165W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YOL033W MSE1 Mitochondrial glutamyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YDL198C YHM1 (putative) mitochondrial carrier protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YJR065C ARP3 involved in the function of the actin cytoskeleton M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YJR064W CCT5 subunit of chaperonin subunit epsilon M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YDR348C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YDR347W MRP1 37 kDa mitochondrial ribosomal protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YBR039W ATP3 gamma subunit of mitochondrial ATP synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YHR037W PUT2 delta-1-pyrroline-5-carboxylate dehydrogenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YFL016C MDJ1 DnaJ homolog involved in mitochondrial biogenesis and protein folding M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YKL186C MTR2 mRNA transport regulator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YMR200W ROT1 putative membrane protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YMR201C RAD14 human xeroderma pigmentosum group A DNA repair gene homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YIL158W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YIL157C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YBR179C FZO1 homolog of Drosophila melanogaster fuzzy onions gene; integral protein of the mitochondrial outer membrane which can be isolated as part of a high molecular weight complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YPL183W-A Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YPL183C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YGR256W GND2 6-phosphogluconate dehydrogenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YGR257C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YER078C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YNL123W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 43 YNL122C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YBR017C KAP104 karyopherin beta 2, yeast transportin M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YBR016W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YBR112C CYC8 Transcription regulatory protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YDR462W MRPL28 Mitochondrial ribosomal protein MRPL28 (YmL28) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YJL112W MDV1 Involved in mitochondrial division M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YDR411C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YLR001C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YLL001W DNM1 Dynamin-related protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YHR064C SSZ1 Hsp70 Protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YHR091C MSR1 Arginyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YBR273C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YGR230W BNS1 similar to Spo12, involved in sporulation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YGR231C PHB2 mitochondrial protein, prohibitin homolog; homolog of mammalian BAP37 and S. cerevisiae Phb1p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YBR261C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YNL137C NAM9 putative mitochondrial S4 ribosomal protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 42 YNL138W SRV2 70-kDa adenylyl cyclase-associated protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YLR435W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YLR436C ECM30 involved in cell wall biogenesis M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YER095W RAD51 RecA homolog; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YKL135C APL2 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YKL137W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YNL083W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YLR309C IMH1 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YLR308W CDA2 Chitin Deacetylase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YLR091W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YER089C PTC2 Protein phosphatase type 2C M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YGR150C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YGR149W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YOR043W WHI2 involved in growth regulation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YGR266W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YGR267C FOL2 GTP-cyclohydrolase I M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YBR213W MET8 Effector in the expression of PAPS reductase and sulfite reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YNR037C RSM19 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YJL003W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YJL002C OST1 64-kDa, alpha subunit of oligosaccharyltransferase complex; homologous to mammalian ribophorin I M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YOR187W TUF1 Translation elongation factor Tu, mitochondrial M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 41 YBL021C HAP3 transcriptional activator protein of CYC1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YLL029W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YOR159C SME1 homologue of human E core protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YOR158W PET123 Mitochondrial ribosomal protein of small subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YEL024W RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YEL023C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YJR136C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YJR135W-A TIM8 Subunit of mitochondrial protein import machinery M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YML036W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YML035C AMD1 putative alpha-mannosidase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YKR085C MRPL20 22.3 kDa mitochondrial ribosomal large subunit protein YmL20; homologous to L17 of E. coli M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YGR155W CYS4 Cystathionine beta-synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YPL098C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YDR246W TRS23 TRAPP subunit of 23 kDa M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YKR064W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YKR065C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YBR160W CDC28 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YKR053C YSR3 DHS-1-P phosphatase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YBR067C TIP1 cell wall mannoprotein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YER049W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 40 YER050C RSM18 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YMR016C SOK2 displays homologies to several transcription factors M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YOR298C-A MBF1 multiprotein bridging factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YOR298W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YER127W LCP5 involved in ribosomal RNA processing M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YJL177W RPL17B Ribosomal protein L17B (L20B) (YL17) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YJL176C SWI3 transcription factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YNL281W HCH1 high copy Hsp90 supressor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YNL280C ERG24 sterol C-14 reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YLR045C STU2 spindle pole body component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YOR373W NUD1 spindle pole body protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YBR066C NRG2 homologue of NRG1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YPR057W BRR1 Spliceosomal snRNP component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YPL127C HHO1 histone H1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YJL054W TIM54 Translocase for the insertion of proteins into the mitochondrial inner membrane. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YNL121C TOM70 70 kDa mitochondrial specialized import receptor of the outer membrane M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YKR009C FOX2 peroxisomal multifunctional beta-oxidation protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YKR008W RSC4 Member of RSC complex. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YGL220W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 39 YGL219C MMM2 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR002W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR035W IMP2 mitochondrial inner membrane protease M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR036C MIH1 homolog of S. pombe cdc25 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YLR299W ECM38 gamma-glutamyltransferase homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YNL309W STB1 Interacts with the putative transcription factor Sin3p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YNL308C KRI1 Binding Protein of Krr1p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YBR217W APG12 involved in autophagy M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YBR218C PYC2 pyruvate carboxylase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YJR112W NNF1 nuclear envelope protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YJR113C RSM7 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YPR165W RHO1 GTP-binding protein of the rho subfamily of ras-like proteins M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YPR166C MRP2 14 kDa mitochondrial ribosomal protein; homologous to E. coli S14 protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR064W AEP1 basic, hydrophilic protein of 59 kDa M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YPR176C BET2 Geranylgeranyltransferase Type II beta subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YPR175W DPB2 DNA polymerase epsilon, subunit B M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YBR022W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YBR023C CHS3 chitin synthase 3 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YER170W ADK2 Adenylate kinase (mitochondrial GTP:AMP phosphotransferase) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YKL121W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR287C MSU1 component of 3'-5'exonuclease complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR286W MRPL33 Mitochondrial ribosomal protein MRPL33 (YmL33) (E. coli L30) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR067C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YMR066W SOV1 (putative) involved in respiration M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YER065C ICL1 isocitrate lyase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YDL147W RPN5 Subunit of the regulatory particle of the proteasome M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YDR487C RIB3 3,4-dihydroxy-2-butanone 4-phosphate synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YLR200W YKE2 Polypeptide 6 of a Yeast Non-native Actin Binding Complex, homolog of a component of the bovine NABC complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YLR201C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YKL126W YPK1 76.5 kDa Serine/threonine protein kinase with similarity to protein kinase C, is 90% identical to Ypk2p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 38 YBL090W MRP21 Component of the small subunit of mitochondrial ribosomes M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDL109C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YHR143W DSE2 Daugher Specific Expression 2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YEL040W UTR2 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YEL039C CYC7 iso-2-cytochrome c M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YMR124W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YLR050C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YPL167C REV3 DNA polymerase zeta subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YPL168W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YPL180W SHD7 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YOL096C COQ3 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YFR018C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YGR059W SPR3 septin protein involved in sporulation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YPL236C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YPL237W SUI3 beta subunit of translation initiation factor eIF-2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDR194C MSS116 Mitochondrial DEAD box RNA helicase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YER040W GLN3 Transcriptional activator of nitrogen-regulated genes M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YBL022C PIM1 mitochondrial ATP-dependent protease M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDR018C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YOR178C GAC1 Regulatory subunit for Glc7p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YBR132C AGP2 Amino acid permease M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YBR131W CCZ1 involved in sporulation, caffeine, calcium, and zinc sensitivity M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDR498C SEC20 membrane glycoprotein, sorted by HDEL retrieval system M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YMR282C AEP2 basic, hydrophilic 67.5 kDa protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YMR281W GPI12 N-acetylglucosaminylphosphatidylinositol de-N-acetylase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YGR216C GPI1 involved in first step of GPI (N-acetylglucosaminylphosphatidylinositol) anchor synthesis M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YGR215W RSM27 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YLR289W GUF1 GTPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YLR290C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YPL222W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YGR017W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YMR296C LCB1 Probable component of serine palmitoyltransferase, which catalyzes the first step in biosynthesis of long-chain sphingolipids M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YLR411W CTR3 Copper Transporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YOR265W RBL2 beta-tubulin binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YBR133C HSL7 regulator of Swe1p kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDL146W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDL145C COP1 alpha subunit of the coatamer complex; gamma-alpha-COP M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YBL081W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YBL080C PET112 62-kDa protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YJR070C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YOR052C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDR033W MRH1 Membrane protein Related to Hsp30p; Localized by immunofluorescence to cell membranes, primarily the plasma membrane. A punctuate immunofluorescence pattern was observed within cell buds. The nuclear envelope, but not the vacuole or mitochondrial membranes, are also immunostained. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YDR034C LYS14 transcription factor involved in lysine biosynthesis M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YHR096C HXT5 hexose transporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 37 YER055C HIS1 ATP phosphoribosyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YEL052W AFG1 ATPase family gene M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YKR087C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YKR086W PRP16 putative ATP-binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YBR142W MAK5 Probable pre-mRNA splicing RNA-helicase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YBR143C SUP45 Homolog of eRF1 (eukaryotic Release Factor 1) in other metazoans. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YHL010C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YDL218W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YDL217C TIM22 Mitochondrial inner membrane protein involved in import M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YDR079C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YDR079W PET100 cytochrome c oxidase-specific assembly factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YBR283C SSH1 Probable SEC61 protein homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YBR282W MRPL27 Mitochondrial ribosomal protein MRPL27 (YmL27) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YNL201C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YNL202W SPS19 peroxisomal 2,4-dienoyl-CoA reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YMR177W MMT1 (putative) mitochondrial metal transporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YGL125W MET13 putative methylenetetrahydrofolate reductase (mthfr) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YGL124C MON1 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YCR033W SNT1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YOL097C WRS1 cytoplasmic tryptophanyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YHR204W MNL1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YML030W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YGR254W ENO1 enolase I M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YGR255C COQ6 COQ6 monooxygenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YAL015C NTG1 DNA glycosylase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YAL016W TPD3 protein phosphatase 2A regulatory subunit A M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YOL034W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YLR293C GSP1 GTP-binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YHR077C NMD2 Highly acidic C-terminus M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YHR076W M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YCL051W LRE1 involved in laminarase resistance M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YCL050C APA1 diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase I M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YBL006C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YGR214W RPS0A Ribosomal protein S0A M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YJL031C BET4 Geranylgeranyltransferase Type II alpha subunit (PGGTase-II, alpha subunit) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YJL033W HCA4 putative RNA helicase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 36 YDR113C PDS1 42-kDa nuclear protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGR103W NOP7 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGR104C SRB5 subunit of RNA polymerase II holoenzyme/mediator complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YIR004W DJP1 involved in peroxisome biogenesis M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YLR421C RPN13 New 26S proteasome subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YLR420W URA4 dihydrooratase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YNL172W APC1 subunit of ubiquitin- protein ligase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YNL169C PSD1 Phosphatidylserine Decarboxylase 1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YOR037W CYC2 cytochrome c mitochondrial import factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YOR038C HIR2 putative repressor protein; contains nuclear targeting signal M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YOR128C ADE2 phosphoribosylamino-imidazole-carboxylase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YOR127W RGA1 rho type GTPase activating protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGL236C MTO1 Mitochondrial Translation Optimization; Strong similarity to E. coli GidA M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR477W SNF1 protein serine/threonine kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR056C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR055W PST1 The gene product has been detected among the proteins secreted by regenerating protoplasts M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YCR072C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YNL183C NPR1 protein kinase homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YBR265W TSC10 3-ketosphinganine reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGR037C ACB1 Acyl-CoA-binding protein (ACBP)/Diazepam binding inhibitor (DBI)/endozepine (EP) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR322W MRPL35 Mitochondrial ribosomal protein MRPL35 (YmL35) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR322C-A TIM11 subunit e of mitochondrial F1F0-ATPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR268W MSW1 mitochondrial tryptophanyl-tRNA synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGR202C PCT1 phosphorylcholine transferase; or cholinephosphate cytidylyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YJL137C GLG2 glycogen synthesis initiator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YDR309C GIC2 Cdc42 binding protein, involved in bud emergence M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGL169W SUA5 translation initiation protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YGL167C PMR1 Ca++-Pump, ATPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YMR009W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 35 YOR313C SPS4 sporulation-specific protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YBL030C PET9 mitochondrial ADP/ATP translocator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YBL031W SHE1 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR056W ERG3 C-5 sterol desaturase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YGR145W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YGR146C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YDR223W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YDR224C HTB1 Histone H2B (HTB1 and HTB2 code for nearly identical proteins) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YFR016C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YFL011W HXT10 high-affinity hexose transporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YFL010C WWM1 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YOR243C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YML017W PSP2 (putative) involved in mRNA splicing M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YML016C PPZ1 serine-threonine phosphatase Z M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YNL230C ELA1 elongin A M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YBL010C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YBL011W SCT1 suppressor of choline-transport mutants M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YIL135C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YIL136W OM45 45-kDa mitochondrial outer membrane protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR058C SHM2 serine hydroxymethyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR057W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YNL002C RLP7 Protein with similarity to ribosomal proteins including Rpl6p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YKL188C PXA2 peroxisomal ABC transporter 2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YKL189W HYM1 The homologue in Aspergillus nidulans, hymA, is involved in development, see Karos, M. and Fischer, R. (1996). hymA (hypha-like metulae), a new developmental mutant of Aspergillus nidulans. Microbiol. 142:3211-3218. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR457C NBP1 Nap1p binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR456W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR257W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YGL095C VPS45 cytosolic and peripheral membrane protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YGL096W TOS8 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YNL209W SSB2 Heat shock protein of HSP70 family, homolog of SSB1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YJR089W BIR1 Baculoviral IAP Repeat-containing protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YJR090C GRR1 cyclin F box protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YBR121C GRS1 Glycyl-tRNA synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YGR065C VHT1 H+-biotin symporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YIL034C CAP2 beta subunit of capping protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR390W-A CCW14 Secretory Stress Response protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YLR392C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YER103W SSA4 member of 70 kDa heat shock protein family M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YNL191W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YPL050C MNN9 Protein required for complex glycosylation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YPL051W ARL3 Similar to ADP-ribosylation factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YOR129C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YJL165C HAL5 (putative) protein kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YJL166W QCR8 Ubiquinol cytochrome-c reductase subunit 8 (11 kDa protein) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YIL017C VID28 vacuole import and degradation M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YIL018W RPL2B Ribosomal protein L2B (L5B) (rp8) (YL6) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YNL223W AUT2 Anchor protein. Mediates attachment of autophagosomes to microtubules. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 34 YKR069W MET1 siroheme synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YML120C NDI1 NADH dehydrogenase (ubiquinone) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YML121W GTR1 Putative small GTPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YMR251W-A HOR7 hyperosmolarity-responsive gene M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YMR252C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YBR159W microsomal beta-keto-reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YER031C YPT31 ras-like GTPase, highly homologous to YPT32 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YER030W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YHR197W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YHR198C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPL268W PLC1 phosphoinositide-specific phospholipase C M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YMR093W UTP15 Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPR187W RPO26 subunit common to RNA polymerases I, II, and III M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPR188C MLC2 putative light chain for Myo1p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGR083C GCD2 translation initiation factor eIF2B, 71 kDa (delta) subunit; translational repressor of GCN4 protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGR082W TOM20 20 kDa mitochondrial outer membrane protein import receptor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPR008W HAA1 Homolog of Ace1 Activator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPL074W YTA6 AAA family ATPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YLR035C MLH2 MutL Homolog M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YDR295C PLO2 Ploidy-related M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGR218W CRM1 Chromosome region maintenance protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGR220C MRPL9 Mitochondrial ribosomal protein MRPL9 (YmL9) (E. coli L3) (human MRL3) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YML062C MFT1 mitochondrial targeting protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YML063W RPS1B Ribosomal protein S1B (rp10B) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YKL094W YJU3 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGL147C RPL9A Ribosomal protein L9A (L8A) (rp24) (YL11) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGL148W ARO2 Chorismate synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGR088W CTT1 cytoplasmic catalase T M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGL246C RAI1 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YGL247W BRR6 Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPL139C UME1 Transcriptional modulator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YNL197C WHI3 Putative RNA binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YOR151C RPB2 second largest subunit of RNA polymerase II M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YOR150W MRPL23 mitochondrial ribosomal protein of the large subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YFL044C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YJR101W RSM26 mitochondrial ribosome small subunit component M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YJR102C VPS25 vacuolar protein sorting (putative) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YIL011W TIR3 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YNL101W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YPL028W ERG10 acetoacetyl CoA thiolase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YDL177C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YDL178W DLD2 D-Lactate Dehydrogenase (Cytochrome) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YOR221C MCT1 malonyl-CoA:ACP transferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YOR220W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YLR313C SPH1 homologous to Spa2p, localizes to sites of polarized growth M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 33 YLR312W-A MRPL15 Mitochondrial ribosomal protein MRPL15 (YmL15) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YNL047C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YNL048W ALG11 Required for N-linked oligosaccharide assembly M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YFL041W FET5 multicopper oxidase, type 1 integral membrane protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YAL046C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YDR214W AHA1 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOR090C PTC5 Type 2C Protein Phosphatase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOR264W DSE3 Daughter Specific Expression 3 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YFR047C BNA6 YFR047C M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YIL049W DFG10 involved in filamentous growth M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOR210W RPB10 RNA polymerase II subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOR211C MGM1 encodes protein with GTP-binding domain related to dynamin M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YBR025C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YBR024W SCO2 SCO1 protein homolog (S. cerevisiae) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YDR052C DBF4 Regulatory subunit of Cdc7p-Dbf4p kinase complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YNL064C YDJ1 yeast dnaJ homolog (nuclear envelope protein); heat shock protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YNL065W AQR1 multidrug resistance transporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YGL183C MND1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOL133W HRT1 subunit of Skp1-Cullin-F-box ubiquitin protein ligase (SCF) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YDR501W PLM2 PLasmid Maintenance M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YDR502C SAM2 S-adenosylmethionine synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YGR049W SCM4 suppressor of cdc4 mutations M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YER177W BMH1 Homolog of mammalian 14-3-3 proteins M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YKL176C LST4 involved in regulated secretion/recycling of nitrogen regulated permeases M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YML007W YAP1 jun-like transcription factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YML006C GIS4 CAAX box containing protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YIL133C RPL16A Ribosomal protein L16A (L21A) (rp22) (YL15) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YIL134W FLX1 mitochondrial inner membrane carrier protein for FAD M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YGR133W PEX4 Member of ubiquitin-conjugating protein family M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOL077C BRX1 Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YOL077W-A ATP19 Subunit k homolog of ATP synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YNR033W ABZ1 para-aminobenzoate synthase, PABA synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YDR073W SNF11 component of SWI/SNF global transcription activator complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YJL083W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YDL100C ARR4 resistance to arsenicals M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YGR229C SMI1 57 kDa nuclear protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YGR227W DIE2 glucosyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YJL039C NUP192 large yeast nucleoporin M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YJL041W NSP1 nuclear pore protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YJL133W MRS3 mitochondrial carrier protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YBR073W RDH54 Putative helicase similar to RAD54 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YNL189W SRP1 karyopherin alpha homolog of 60 kDa M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 32 YHR189W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YER024W YAT2 carnitine acetyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR125C PTC4 Type 2C protein phosphatase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YDR045C RPC11 TFIIS-like small Pol III subunit C11 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YDR044W HEM13 Coproporphyrinogen III oxidase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YER043C SAH1 putative S-adenosyl-L-homocysteine hydrolase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YER042W MXR1 peptide methionine sulfoxide reductase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YNR052C POP2 Putative transcription factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YPL155C KIP2 kinesin-related protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YJR125C ENT3 Ent3p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YPR117W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YGR141W VPS62 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR196C PGI1 Glucose-6-phosphate isomerase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR049C REB1 RNA polymerase I enhancer binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR048W RPS11B Ribosomal protein S11B (S18B) (rp41B) (YS12) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YOL023W IFM1 mitochondrial initiation factor 2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YOL022C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YHR083W Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR003W COQ1 hexaprenyl pyrophosphate synthetase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR004C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YGR054W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YKL090W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YKL081W TEF4 Translation elongation factor EF-1gamma M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YGL225W VRG4 Golgi GDP-mannose transporter M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YGL224C SDT1 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR157C ICS2 Increased Copper Sensitivity M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YKR052C MRS4 mitochondrial carrier protein, highly homologous to Mrs3p M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YKR051W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YKL084W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YKL082C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YHR032W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YGR028W MSP1 40 kDa putative membrane-spanning ATPase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YOR147W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YOR148C SPP2 spliceosome-associated protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR085C-A Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR085W AAC3 mitochondrial ADP/ATP translocator M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YCR028C-A RIM1 Single-stranded zinc finger DNA-binding protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YMR246W FAA4 long-chain fatty acid--CoA ligase and synthetase 4 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YMR247C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YER027C GAL83 glucose repression protein, a component of the Snf1 complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YAL056W KRH1 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YBR130C SHE3 involved in cell polarity M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YML093W UTP14 Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YML092C PRE8 proteasome component Y7 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YJR134C SGM1 Product of gene unknown M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YJR133W XPT1 Xanthine Phosphoribosyl Transferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YDR233C Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YDR232W HEM1 5-aminolevulinate synthase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 31 YML125C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YAL061W putative polyol dehydrogenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YOR173W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YER092W IES5 Ino Eighty Subunit 5 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YER093C Protein required for cell viability M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YPL078C ATP4 F(1)F(0)-ATPase complex delta subunit, mitochondrial M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YPL079W RPL21B Ribosomal protein L21B M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YOR361C PRT1 translation initiation factor eIF3 subunit M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YER126C NSA2 M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YER125W RSP5 Rsp5p encodes a hect (homologous to E6-AP C terminus) and encodes a ubiquitin-protein ligase (E3 enzyme) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YPL031C PHO85 cyclin-dependent protein kinase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YDR264C AKR1 Ankyrin repeat-containing protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YLR092W SUL2 high affinity sulfate permease M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YLR093C NYV1 vacuolar v-SNARE M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YJR005W APL1 beta-adaptin, large subunit of the clathrin-associated protein complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YDL052C SLC1 putative 1-acyl-sn-gylcerol-3-phosphate acyl transferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YMR080C NAM7 putative helicase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YMR079W SEC14 phosphatidylinositol transfer protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YGL001C ERG26 C-3 sterol dehydrogenase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YGL002W ERP6 p24 protein involved in membrane trafficking M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YDR176W NGG1 transcription factor; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YOR358W HAP5 Component, along with Hap2p and Hap3p, of CCAAT-binding transcription factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YDR119W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YAL032C PRP45 pre-mRNA splicing factor M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YAL033W POP5 An integral subunit of RNase P and apparent subunit of RNase MRP M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YJL062W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YAL037W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YAL036C FUN11 similar to Xenopus GTP-binding protein DRG M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YGL018C JAC1 member of the 20-kDa J-protein family of co-chaperones; homolog of E. coli Hsc20 co-chaperone protein M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YGL019W CKB1 beta (38kDa) subunit of casein kinase II (CKII) M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YJR049C UTR1 involved in ferric reductase activity M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YJR048W CYC1 iso-1-cytochrome c M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YNR051C BRE5 protein of unknown function M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YNL300W TOS6 Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YBR184W Hypothetical ORF M[6] WTATWTACADG Novel: Mitochondrial downstream down 1 30 YBR185C MBA1 involved in assembly of mitochondrial respiratory complexes M[6] M[7] .GRRAAAWTTTTCACT Known: ESR2 down 3 147 YLR196W PWP1 similar to beta-transducin superfamily M[7] .GRRAAAWTTTTCACT Known: ESR2 down 2 99 YDR430C CYM1 Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 2 94 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[7] .GRRAAAWTTTTCACT Known: ESR2 down 2 87 YGR161C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 81 YHR090C YNG2 NuA4 histone acetyltransferase complex component M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 81 YCL030C HIS4 histidinol dehydrogenase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 77 YDL166C FAP7 Nuclear protein involved in oxidative stress response M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 71 YJL034W KAR2 Homologue of mammalian BiP (GPR78) protein; member of the HSP70 gene family M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 71 YBR035C PDX3 pyridoxine (pyridoxiamine) phosphate oxidase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 70 YLR248W RCK2 Serine/threonine protein kinase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 70 YLR371W ROM2 GDP-GTP Exchange Protein (GEP) for Rho1p M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 68 YPR040W SDF1 Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 63 YMR310C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 62 YOL026C Protein required for cell viability M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 61 YMR309C NIP1 ~100 kDa cytoplasmic protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 60 YNR054C Protein required for cell viability M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 59 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 59 YGL254W FZF1 putative transcription factor, has five zinc fingers M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 58 YKL126W YPK1 76.5 kDa Serine/threonine protein kinase with similarity to protein kinase C, is 90% identical to Ypk2p M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 58 YJL069C UTP18 Protein required for cell viability M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 58 YPL239W YAR1 YAR1 encodes a 200-amino-acid protein with two ANK repeat motifs and an acidic C terminus rich in PEST-like sequences M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 57 YJL109C UTP10 Protein required for cell viability M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 57 YLR355C ILV5 acetohydroxyacid reductoisomerase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 56 YMR311C GLC8 Regulates activity of protein phosphatase 1, Glc7p, which is involved in proper chromosome segregation M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 56 YDL195W SEC31 Component (p150) of COPII coat of secretory pathway vesicles M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 56 YGL077C HNM1 Transporter (permease) for choline and nitrogen mustard; share homology with UGA4 M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 55 YML125C Protein required for cell viability M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 55 YGR111W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 55 YKR058W GLG1 glycogen synthesis initiator M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 55 YHR065C RRP3 RRP3 is a DEAD box gene homologous to eIF-4a which encodes an RNA-dependent ATPase possessing helicase activity which is not specific for RNA M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 55 YOR311C HSD1 ER membrane protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 54 YLR223C IFH1 has a weak RNA-dependent ATPase activity which is not specific for rRNA M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 54 YAL024C LTE1 putative GTP-exchange protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 52 YGL100W SEH1 nuclear pore protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 52 YPL176C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 52 YJR072C Protein required for cell viability M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 52 YNL254C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 52 YDL230W PTP1 phosphotyrosine-specific protein phosphatase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 51 YPR093C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 48 YGR201C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 47 YJR001W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 47 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 47 YIL037C PRM2 M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 47 YHR096C HXT5 hexose transporter M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 46 YJL107C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 46 YBL071W-A Similar to Hemiascomycetous yeast protein (FEBS Lett. 487(1): 31-36 (2000)). M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 46 YHR204W MNL1 M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 46 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 46 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 46 YPR116W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 45 YAL020C ATS1 similarity to human RCC1 protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 45 YPL250C ICY2 interacting with the cytoskeleton M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 44 YKL039W PTM1 Putative membrane protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 43 YML094W GIM5 bovine prefoldin subunit 5 homolog (putative) M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 43 YDR394W RPT3 ATPase (AAA family) component of the 26S proteasome complex M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 43 YPL208W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 42 YPL246C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 42 YNL153C GIM3 bovine prefoldin subunit 4 homolog (putative) M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 41 YPL045W VPS16 Vacuolar sorting protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 38 YNL197C WHI3 Putative RNA binding protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 37 YGR246C BRF1 RNA polymerase III transcription factor with homology to TFIIB M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 36 YNL293W MSB3 Multicopy Suppressor of Bud Emergence M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 35 YLR059C REX2 RNA exonuclease M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 35 YBR026C MRF1' Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 35 YHR195W NVJ1 Vac8p binding protein; nucleus-vacuole junction M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 34 YCR073C SSK22 protein kinase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 34 YER068W MOT2 putative zinc finger protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 33 YPR027C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 33 YPR026W ATH1 Acid trehalase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 32 YOR052C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 32 YJL149W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 32 YDR082W STN1 involved in telomere length regulation M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 32 YNL092W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 32 YPL107W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 32 YPL106C SSE1 HSP70 family member, highly homologous to Ssa1p and Sse2p M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 31 YLR004C Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 31 YHR105W Hypothetical ORF M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 30 YBR112C CYC8 Transcription regulatory protein M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 30 YNL113W RPC19 subunit common to RNA polymerases I (A) and III (C) M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 30 YGL017W ATE1 arginyl-tRNA-protein transferase M[7] .GRRAAAWTTTTCACT Known: ESR2 down 1 30 YLR222C UTP13 Protein required for cell viability M[7] M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 5 253 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 3 148 YNL299W TRF5 exhibits homology to Trf4p and Top1p M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 3 137 YDR076W RAD55 RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 3 134 YDR388W RVS167 (putative) cytoskeletal protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 123 YPL188W POS5 involved in oxidative stress M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 111 YNL054W VAC7 Integral vacuolar membrane protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 100 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 99 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 98 YBR201W DER1 involved in degradation in the ER M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 92 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 91 YMR251W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 83 YIL159W BNR1 involved in actin filament organization M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 81 YEL041W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 79 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 63 YKR041W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 2 62 YER166W DNF1 Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 61 YKR039W GAP1 general amino acid permease M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 61 YOR065W CYT1 Cytochrome c1 M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 58 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 57 YDL181W INH1 ATPase inhibitor M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 55 YGR250C Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 55 YGR249W MGA1 Mga1p shows similarity to heat shock transcription factor M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 54 YNL191W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 54 YJL052W TDH1 Glyceraldehyde-3-phosphate dehydrogenase 1 M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 54 YPR159W KRE6 potential beta-glucan synthase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 53 YNR027W BUD17 M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 53 YNL161W CBK1 Protein kinase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 52 YIL123W SIM1 (putative) invovled in control of DNA replication M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 52 YPL154C PEP4 vacuolar proteinase A M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 52 YJL168C SET2 transcription factor containing a SET domain M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 52 YML058W-A HUG1 induced by DNA damage and replication arrest M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 51 YHR090C YNG2 NuA4 histone acetyltransferase complex component M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 49 YKL128C PMU1 Phospo-mutase homolog M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 49 YCR043C Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 49 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 49 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 49 YHR005C-A MRS11 component of mitochondrial import machinery M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 48 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 48 YHR094C HXT1 High-affinity hexose (glucose) transporter M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 47 YCL049C Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 46 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 46 YPL222W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 45 YGR013W SNU71 U1 snRNP protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 45 YNL066W SUN4 Protein involved in the aging process M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 44 YCL030C HIS4 histidinol dehydrogenase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 44 YLR035C MLH2 MutL Homolog M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 43 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 43 YPR122W AXL1 putative homolog of human insulin-degrading endoprotease M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 42 YDL019C OSH2 Oxysterol Binding Protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 42 YOR229W WTM2 Transcriptional modulator M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 41 YCL055W KAR4 transcription factor involved in karyogamy M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 41 YLR371W ROM2 GDP-GTP Exchange Protein (GEP) for Rho1p M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 41 YOR144C ELG1 Enhanced Frequency of Direct-repeat recombination M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 41 YKL214C YRA2 Yeast RNA Annealing protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 41 YBL090W MRP21 Component of the small subunit of mitochondrial ribosomes M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 40 YBR044C TCM62 mitochondrial protein; (putative) chaperone M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 40 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 40 YML031W NDC1 Nuclear envelope protein with multiple putative transmembrane domains M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 40 YMR262W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 40 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 39 YAL021C CCR4 95 kDa containng leucine rich tandem repeats M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 39 YJL157C FAR1 Cdc28p kinase inhibitor M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 39 YJL043W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 39 YMR319C FET4 Low-affinity Fe(II) transport protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 39 YIL016W SNL1 18.3 kD integral membrane protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 38 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 38 YJL149W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 37 YML113W DAT1 datin, an oligo(dA).oligo(dT)-binding protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 37 YLL022C HIF1 interacts with histone acetyltransferase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 37 YMR016C SOK2 displays homologies to several transcription factors M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 37 YJR050W ISY1 interacts with the spliceosome M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YKL067W YNK1 Nucleoside diphosphate kinase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YKL065C YET1 Yeast endoplasmic reticulum 25 kDa transmembrane protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YNL230C ELA1 elongin A M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YOR288C MPD1 Disulfide isomerase related protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YOR370C MRS6 Rab geranylgeranyltransferase regulatory subunit M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YGR178C PBP1 interacts with poly(A)-binding protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YJR129C Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 36 YGL117W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YLL031C GPI13 phosphoryltransferase that adds phosphoethanolamine to the third mannose residue of the GPI anchor precursor M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YPR018W RLF2 p90 subunit of yeast Chromatin Assembly Factor-I (CAF-I) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YMR009W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YNL234W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YNL024C Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 35 YDR054C CDC34 ubiquitin-conjugating enzyme, E2 M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 34 YGL022W STT3 Putative integral ER membrane protein; subunit of the oligosaccharyltransferase complex M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 34 YMR198W CIK1 spindle pole body associated protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 34 YBR152W SPP381 U4/U6.U5-associated snRNP protein; contains a PEST proteolysis motif M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 34 YMR321C Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 33 YDL004W ATP16 ATP synthase delta subunit M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 33 YER164W CHD1 transcriptional regulator M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 33 YOL066C RIB2 DRAP deaminase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 33 YMR309C NIP1 ~100 kDa cytoplasmic protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 33 YPL140C MKK2 protein kinase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 33 YOR048C RAT1 RNA trafficking protein; transcription activator M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 32 YJL034W KAR2 Homologue of mammalian BiP (GPR78) protein; member of the HSP70 gene family M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 32 YDR121W DPB4 DNA polymerase II (epsilon) 4th subunit M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 32 YDR310C SUM1 nuclear protein involved in silencing M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 32 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 32 YDL234C GYP7 GTPase-activating protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YKL098W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YIL050W PCL7 PHO85 cyclin M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YNL092W Hypothetical ORF M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YOL120C RPL18A Ribosomal protein L18A (rp28A) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YPL139C UME1 Transcriptional modulator M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YBR035C PDX3 pyridoxine (pyridoxiamine) phosphate oxidase M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YIL142W CCT2 molecular chaperone M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 31 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 30 YOR310C NOP58 57 kDa nucleolar protein M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 30 YPR008W HAA1 Homolog of Ace1 Activator M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 30 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[8] TTCC.aAtt.GGAAA Known: Mcm1 down 1 30 YGR156W PTI1 M[8] M[9] CGTTTCTTTTTCY. Known: ARS down 3 157 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[9] CGTTTCTTTTTCY. Known: ARS down 2 134 YPR079W MRL1 M[9] CGTTTCTTTTTCY. Known: ARS down 2 130 YOR337W TEA1 Ty1 enhancer activator M[9] CGTTTCTTTTTCY. Known: ARS down 2 122 YOR361C PRT1 translation initiation factor eIF3 subunit M[9] CGTTTCTTTTTCY. Known: ARS down 2 117 YNL200C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 2 116 YHR178W STB5 Zinc finger (6-Cys) M[9] CGTTTCTTTTTCY. Known: ARS down 2 114 YLR024C UBR2 ubiquitin-protein ligase (E3) M[9] CGTTTCTTTTTCY. Known: ARS down 2 107 YMR010W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 2 100 YJL157C FAR1 Cdc28p kinase inhibitor M[9] CGTTTCTTTTTCY. Known: ARS down 2 98 YOR021C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 2 94 YER044C ERG28 M[9] CGTTTCTTTTTCY. Known: ARS down 2 93 YOR307C SLY41 homolog of chloroplast phosphate transporter M[9] CGTTTCTTTTTCY. Known: ARS down 2 91 YER053C sequence similarity to mitochondrial phosphate transporters M[9] CGTTTCTTTTTCY. Known: ARS down 2 86 YER176W ECM32 DNA Helicase I M[9] CGTTTCTTTTTCY. Known: ARS down 2 85 YLR248W RCK2 Serine/threonine protein kinase M[9] CGTTTCTTTTTCY. Known: ARS down 1 76 YPL222W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 75 YDL219W DTD1 D-Tyr-tRNA(Tyr) deacylase M[9] CGTTTCTTTTTCY. Known: ARS down 1 74 YNL210W MER1 encodes protein with RNA-binding motifs required for MRE2-dependent mRNA splicing M[9] CGTTTCTTTTTCY. Known: ARS down 1 70 YPL158C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 68 YMR009W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 68 YGR161C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 67 YNL066W SUN4 Protein involved in the aging process M[9] CGTTTCTTTTTCY. Known: ARS down 1 67 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[9] CGTTTCTTTTTCY. Known: ARS down 1 67 YDL110C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 66 YMR319C FET4 Low-affinity Fe(II) transport protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 65 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[9] CGTTTCTTTTTCY. Known: ARS down 1 64 YGR283C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 63 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[9] CGTTTCTTTTTCY. Known: ARS down 1 63 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[9] CGTTTCTTTTTCY. Known: ARS down 1 62 YER034W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 61 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[9] CGTTTCTTTTTCY. Known: ARS down 1 61 YPL230W Up in StarVation M[9] CGTTTCTTTTTCY. Known: ARS down 1 60 YJR053W BFA1 similar to Byr4 M[9] CGTTTCTTTTTCY. Known: ARS down 1 59 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 59 YKR041W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 58 YGR054W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 58 YJL129C TRK1 180 kDa high affinity potassium transporter M[9] CGTTTCTTTTTCY. Known: ARS down 1 58 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[9] CGTTTCTTTTTCY. Known: ARS down 1 57 YPL041C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 57 YNL079C TPM1 tropomyosin I M[9] CGTTTCTTTTTCY. Known: ARS down 1 57 YPR124W CTR1 Copper transport protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 55 YBR039W ATP3 gamma subunit of mitochondrial ATP synthase M[9] CGTTTCTTTTTCY. Known: ARS down 1 55 YPL093W NOG1 (putative) nucleolar G-protein; homologs identified in human and Trypanosoma brucei M[9] CGTTTCTTTTTCY. Known: ARS down 1 55 YLR295C ATP14 ATP synthase subunit h M[9] CGTTTCTTTTTCY. Known: ARS down 1 54 YBL013W FMT1 Methionyl-tRNA Transformylase M[9] CGTTTCTTTTTCY. Known: ARS down 1 53 YPL125W KAP120 karyopherin M[9] CGTTTCTTTTTCY. Known: ARS down 1 53 YBR239C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 53 YDR349C YPS7 GPI-anchored aspartic protease M[9] CGTTTCTTTTTCY. Known: ARS down 1 52 YPL164C MLH3 MutL Homolog M[9] CGTTTCTTTTTCY. Known: ARS down 1 52 YDL156W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 52 YPL147W PXA1 ABC family long-chain fatty acid transporter M[9] CGTTTCTTTTTCY. Known: ARS down 1 52 YPL146C Protein required for cell viability M[9] CGTTTCTTTTTCY. Known: ARS down 1 52 YFL006W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 49 YCL055W KAR4 transcription factor involved in karyogamy M[9] CGTTTCTTTTTCY. Known: ARS down 1 49 YOR358W HAP5 Component, along with Hap2p and Hap3p, of CCAAT-binding transcription factor M[9] CGTTTCTTTTTCY. Known: ARS down 1 49 YML081W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 48 YPL091W GLR1 Glutathione oxidoreductase M[9] CGTTTCTTTTTCY. Known: ARS down 1 48 YPL090C RPS6A Ribosomal protein S6A (S10A) (rp9) (YS4) M[9] CGTTTCTTTTTCY. Known: ARS down 1 48 YDR463W STP1 Nuclear-localized protein containing zinc finger motifs M[9] CGTTTCTTTTTCY. Known: ARS down 1 48 YCR014C POL4 DNA polymerase IV M[9] CGTTTCTTTTTCY. Known: ARS down 1 48 YCR012W PGK1 3-phosphoglycerate kinase M[9] CGTTTCTTTTTCY. Known: ARS down 1 47 YCR046C IMG1 mitochondrial ribosomal protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 47 YHR169W DBP8 DEAD-box protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 47 YCR032W BPH1 (putative) acetic acid export pump M[9] CGTTTCTTTTTCY. Known: ARS down 1 47 YNL236W SIN4 component of RNA polymerase II holoenzyme/mediator complex M[9] CGTTTCTTTTTCY. Known: ARS down 1 46 YDR310C SUM1 nuclear protein involved in silencing M[9] CGTTTCTTTTTCY. Known: ARS down 1 46 YOL135C MED7 Stoichiometric member of mediator complex M[9] CGTTTCTTTTTCY. Known: ARS down 1 46 YDL018C ERP3 p24 protein involved in membrane trafficking M[9] CGTTTCTTTTTCY. Known: ARS down 1 46 YBR052C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 46 YLL028W TPO1 polyamine transport protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 45 YJL137C GLG2 glycogen synthesis initiator M[9] CGTTTCTTTTTCY. Known: ARS down 1 45 YLR412W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 43 YJL047C RTT101 Regulator of Ty1 Transposition M[9] CGTTTCTTTTTCY. Known: ARS down 1 43 YDR394W RPT3 ATPase (AAA family) component of the 26S proteasome complex M[9] CGTTTCTTTTTCY. Known: ARS down 1 43 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[9] CGTTTCTTTTTCY. Known: ARS down 1 43 YAL021C CCR4 95 kDa containng leucine rich tandem repeats M[9] CGTTTCTTTTTCY. Known: ARS down 1 42 YLR324W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 42 YLR325C RPL38 Ribosomal protein L38 M[9] CGTTTCTTTTTCY. Known: ARS down 1 42 YHR182W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 42 YGL077C HNM1 Transporter (permease) for choline and nitrogen mustard; share homology with UGA4 M[9] CGTTTCTTTTTCY. Known: ARS down 1 42 YLR312C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 42 YPL088W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 41 YOR179C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 41 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[9] CGTTTCTTTTTCY. Known: ARS down 1 41 YHR027C RPN1 Subunit of 26S Proteasome (PA700 subunit) M[9] CGTTTCTTTTTCY. Known: ARS down 1 41 YHR026W PPA1 vacuolar ATPase V0 domain subunit c'' M[9] CGTTTCTTTTTCY. Known: ARS down 1 41 YPL268W PLC1 phosphoinositide-specific phospholipase C M[9] CGTTTCTTTTTCY. Known: ARS down 1 41 YNL054W VAC7 Integral vacuolar membrane protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 40 YGL181W GTS1 Glycine-threonine-serine repeat protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 40 YJL123C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 39 YKL117W SBA1 Hsp90 (Ninety) Associated Co-chaperone M[9] CGTTTCTTTTTCY. Known: ARS down 1 39 YKL116C PRR1 M[9] CGTTTCTTTTTCY. Known: ARS down 1 39 YNL187W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 39 YOR033C EXO1 exonuclease M[9] CGTTTCTTTTTCY. Known: ARS down 1 39 YBR222C FAT2 Probable AMP-binding protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 38 YDL106C PHO2 Homeobox-domain containing transcription fractor which is a positive regulator of PHO5 and other genes. M[9] CGTTTCTTTTTCY. Known: ARS down 1 38 YDL107W MSS2 cox1 pre-mRNA splicing factor M[9] CGTTTCTTTTTCY. Known: ARS down 1 38 YDR074W TPS2 Trehalose-6-phosphate phosphatase M[9] CGTTTCTTTTTCY. Known: ARS down 1 37 YNL190W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 37 YBR053C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 37 YML125C Protein required for cell viability M[9] CGTTTCTTTTTCY. Known: ARS down 1 36 YGR240C PFK1 phosphofructokinase alpha subunit M[9] CGTTTCTTTTTCY. Known: ARS down 1 36 YIL034C CAP2 beta subunit of capping protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YMR042W ARG80 transcription factor M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YDR356W SPC110 component of the spindle pole body that interacts with Spc42p, calmodulin, and a 35 kDa protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YDR357C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YER049W Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YER050C RSM18 mitochondrial ribosome small subunit component M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YOR313C SPS4 sporulation-specific protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 35 YJR006W HYS2 DNA polymerase delta 55 KD subunit M[9] CGTTTCTTTTTCY. Known: ARS down 1 34 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[9] CGTTTCTTTTTCY. Known: ARS down 1 34 YPL113C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 34 YGR285C ZUO1 Zuotin, putative Z-DNA binding protein M[9] CGTTTCTTTTTCY. Known: ARS down 1 33 YKL049C CSE4 high similarity to histone H3 and to human centromere protein CENP-A M[9] CGTTTCTTTTTCY. Known: ARS down 1 33 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[9] CGTTTCTTTTTCY. Known: ARS down 1 32 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[9] CGTTTCTTTTTCY. Known: ARS down 1 32 YNL024C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 32 YOL138C Hypothetical ORF M[9] CGTTTCTTTTTCY. Known: ARS down 1 30 YGL128C CWC23 Protein required for cell viability M[9] M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 90 YDR310C SUM1 nuclear protein involved in silencing M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 89 YGR248W SOL4 similar to SOL3 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 87 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 82 YMR198W CIK1 spindle pole body associated protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 81 YBR026C MRF1' Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 76 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 75 YJL128C PBS2 MAP kinase kinase (MEK), may act as a scaffolding protein for Sho1p, Ste11p, and Hog1p M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 72 YPR122W AXL1 putative homolog of human insulin-degrading endoprotease M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 72 YLL023C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 71 YIL142W CCT2 molecular chaperone M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 70 YKL038W RGT1 transcriptional repressor and activator M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 70 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 69 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 69 YGL073W HSF1 heat shock transcription factor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 68 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 68 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 2 66 YJR094C IME1 transcription factor involved in meiosis M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 54 YPR159W KRE6 potential beta-glucan synthase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 54 YEL043W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 54 YDL144C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 54 YOR232W MGE1 GrpE homolog, mitochondrial matrix protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 54 YIR035C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 53 YJL170C ASG7 An a-specific gene that is induced to a higher expression level by alpha factor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 53 YCR018C SRD1 Transcription regulator M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 52 YBR053C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 52 YPR183W DPM1 dolichol phosphate mannose synthase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 52 YMR016C SOK2 displays homologies to several transcription factors M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 52 YNL088W TOP2 topoisomerase II, Top2p localizes to axial cores in meiosis M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 52 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 51 YKR002W PAP1 poly(A) polymerase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 50 YLR427W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 50 YHR090C YNG2 NuA4 histone acetyltransferase complex component M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 49 YJL203W PRP21 RNA splicing factor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 49 YGR093W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 49 YBR239C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 49 YBR175W SWD3 YBR175W M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 48 YNL161W CBK1 Protein kinase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 47 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 45 YHR049W FSH1 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 45 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 44 YDR352W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 43 YDR305C HNT2 member of the histidine triad family M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 43 YAL022C FUN26 predicted membrane protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 43 YEL041W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 42 YCR023C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 42 YKL069W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 42 YBR284W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YNL002C RLP7 Protein with similarity to ribosomal proteins including Rpl6p M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YDL004W ATP16 ATP synthase delta subunit M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YOR370C MRS6 Rab geranylgeranyltransferase regulatory subunit M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YJR052W RAD7 nucleotide excision NEF4 component M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YBR201W DER1 involved in degradation in the ER M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YOR104W PIN2 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 41 YHL020C OPI1 negative regulator of phospholipid biosynthesis M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YBR222C FAT2 Probable AMP-binding protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YMR093W UTP15 Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YGR178C PBP1 interacts with poly(A)-binding protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YOR201C PET56 Ribose methyltransferase for mitochondrial 21S rRNA M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YJR031C GEA1 GDP/GTP exchange factor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YGL093W SPC105 component of spindle pole M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YAL013W DEP1 regulation of phospholipid metabolism M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YOR034C AKR2 involved in constitutive endocytosis of Ste3p M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YLR248W RCK2 Serine/threonine protein kinase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YMR319C FET4 Low-affinity Fe(II) transport protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YPR135W CTF4 DNA polymerase alpha binding protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YBR126C TPS1 56 kD synthase subunit of trehalose-6-phosphate synthase/phosphatase complex M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YJR072C Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YJL157C FAR1 Cdc28p kinase inhibitor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 40 YHR161C YAP1801 clathrin assembly protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YBL075C SSA3 heat-inducible cytosolic member of the 70 kDa heat shock protein family M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YDR076W RAD55 RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YPR022C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YLR299W ECM38 gamma-glutamyltransferase homolog M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YLR262C-A Similar to C. elegans protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YNL190W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YCR031C RPS14A Ribosomal protein S14A (rp59A) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YHR122W Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 39 YPL031C PHO85 cyclin-dependent protein kinase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YPR118W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YPL262W FUM1 mitochondrial and cytoplasmic fumarase (fumarate hydralase) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YPR113W PIS1 phosphatidylinositol synthase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YDR506C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YML125C Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YCR033W SNT1 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YPR018W RLF2 p90 subunit of yeast Chromatin Assembly Factor-I (CAF-I) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YBL033C RIB1 GTP cyclohydrolase II M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YPR074C TKL1 Transketolase 1 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YBR196C PGI1 Glucose-6-phosphate isomerase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YPR079W MRL1 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 38 YGR001C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YPL154C PEP4 vacuolar proteinase A M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YMR183C SSO2 post-Golgi t-SNARE M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YOL104C NDJ1 involved in meiotic chromosome segregation M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YKL078W DHR2 Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YBR251W MRPS5 Probable mitochondrial ribosomal protein S5 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YKL090W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YOL082W CVT19 CVT20 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YOR337W TEA1 Ty1 enhancer activator M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YKR041W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YJR073C OPI3 Methylene-fatty-acyl-phospholipid synthase (unsaturated phospholipid N-methyltransferase) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YOL027C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YNL153C GIM3 bovine prefoldin subunit 4 homolog (putative) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 37 YDL179W PCL9 Cyclin M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YLL036C PRP19 RNA splicing factor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YBR200W BEM1 contains two SH3 domains M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YNR052C POP2 Putative transcription factor M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YNL078W NIS1 Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YDR527W Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YER028C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YML109W ZDS2 Zds1 homolog M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YKL162C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YKL163W PIR3 Protein containing tandem internal repeats M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YBR059C AKL1 Serine-threonine protein kinase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YNL168C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YDL161W ENT1 Ent1p M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YDL160C DHH1 (putative) DEAD box RNA helicase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YDR349C YPS7 GPI-anchored aspartic protease M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YPR037C ERV2 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YPL063W Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YOR156C NFI1 interacts with C-terminus of CDC12 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YEL042W GDA1 Guanosine diphosphatase of Golgi membrane M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YMR185W Protein required for cell viability M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 36 YLR412W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YPL190C NAB3 nuclear polyadenylated RNA/single strand DNA-binding protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YHR086W NAM8 putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YJL137C GLG2 glycogen synthesis initiator M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YOR179C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YAL053W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YHR023W MYO1 Class II Myosin M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YHR024C MAS2 53 kDa subunit of the mitochondrial processing protease M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YNL282W POP3 RNase P and RNase MRP subunit M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YPR145W ASN1 asparagine synthetase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YPR147C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YPL267W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 35 YLR401C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YBR071W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YHR176W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YGR141W VPS62 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YPL105C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YNL068C FKH2 Fork Head homolog two M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YML002W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YDL123W SNA4 Small integral membrane protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YDL109C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YBR179C FZO1 homolog of Drosophila melanogaster fuzzy onions gene; integral protein of the mitochondrial outer membrane which can be isolated as part of a high molecular weight complex M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 34 YOR361C PRT1 translation initiation factor eIF3 subunit M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YBR112C CYC8 Transcription regulatory protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YPR015C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YPL133C RDS2 Transcriptional regulator M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YMR240C CUS1 U2 snRNP protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YKL141W SDH3 succinate dehydrogenase cytochrome b M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YEL001C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YCL049C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 33 YMR199W CLN1 G(sub)1 cyclin M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YCR028C FEN2 Amino acid permease M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YNL024C Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YGL025C PGD1 RNA polymerase II mediator subunit M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YHL014C YLF2 GTP-binding protein and glycogen phosphorylase (weak) M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YHL015W RPS20 Ribosomal protein S20 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YGL207W SPT16 global regulator of transcription M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YGL206C CHC1 presumed vesicle coat protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YDL186W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YHR019C DED81 Asparaginyl-tRNA synthetase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YGL189C RPS26A Ribosomal protein S26A M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YHR025W THR1 homoserine kinase M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 32 YJL083W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YNL166C BNI5 bud neck protein M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YLR390W ECM19 involved in cell wall biogenesis M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YKL217W JEN1 carboxylic acid transporter protein homolog M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YDR213W UPC2 zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YGR049W SCM4 suppressor of cdc4 mutations M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YJR001W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 31 YNL234W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 30 YGR135W PRE9 proteasome component Y13 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 30 YOR065W CYT1 Cytochrome c1 M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 30 YFL016C MDJ1 DnaJ homolog involved in mitochondrial biogenesis and protein folding M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 30 YBR056W Hypothetical ORF M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 30 YBR057C MUM2 similar to ubiquitin C-terminal hydrolase, involved in meiosis M[10] .TYYTCGAGA. Known: XBP1 (HSF1-coocuring) down 1 30 YFR021W AUT10 Hypothetical ORF M[10] M[11] .WTTTCGCGTT Known: Swi4 down 4 164 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[11] .WTTTCGCGTT Known: Swi4 down 2 105 YIL142W CCT2 molecular chaperone M[11] .WTTTCGCGTT Known: Swi4 down 2 100 YDR221W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 2 90 YGL037C PNC1 pyrazinamidase and nicotinamidase M[11] .WTTTCGCGTT Known: Swi4 down 2 90 YOL006C TOP1 topoisomerase I M[11] .WTTTCGCGTT Known: Swi4 down 2 89 YFL044C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 2 89 YCR063W BUD31 M[11] .WTTTCGCGTT Known: Swi4 down 2 88 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[11] .WTTTCGCGTT Known: Swi4 down 2 79 YLR248W RCK2 Serine/threonine protein kinase M[11] .WTTTCGCGTT Known: Swi4 down 2 73 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[11] .WTTTCGCGTT Known: Swi4 down 2 72 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[11] .WTTTCGCGTT Known: Swi4 down 2 70 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[11] .WTTTCGCGTT Known: Swi4 down 1 64 YDL193W Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 64 YPL125W KAP120 karyopherin M[11] .WTTTCGCGTT Known: Swi4 down 1 63 YOL091W SPO21 involved in sporulation M[11] .WTTTCGCGTT Known: Swi4 down 1 63 YNL083W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 62 YNL279W PRM1 pheromone-regulated membrane protein M[11] .WTTTCGCGTT Known: Swi4 down 1 62 YDL004W ATP16 ATP synthase delta subunit M[11] .WTTTCGCGTT Known: Swi4 down 1 60 YER103W SSA4 member of 70 kDa heat shock protein family M[11] .WTTTCGCGTT Known: Swi4 down 1 58 YEL060C PRB1 vacuolar protease B M[11] .WTTTCGCGTT Known: Swi4 down 1 57 YKR084C HBS1 Protein related to translation elongation factor EF-1alpha and to Suf12p/Sup2p/Gst1p/Sup35p M[11] .WTTTCGCGTT Known: Swi4 down 1 56 YNL230C ELA1 elongin A M[11] .WTTTCGCGTT Known: Swi4 down 1 54 YNL271C BNI1 contains formin homology domains; homologous to BNR1 (BNI1 related protein) M[11] .WTTTCGCGTT Known: Swi4 down 1 52 YDR317W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 52 YIL131C FKH1 forkhead protein M[11] .WTTTCGCGTT Known: Swi4 down 1 52 YBR089C-A NHP6B 11-kDa nonhistone chromosomal protein M[11] .WTTTCGCGTT Known: Swi4 down 1 51 YPL268W PLC1 phosphoinositide-specific phospholipase C M[11] .WTTTCGCGTT Known: Swi4 down 1 51 YDR287W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 51 YDR398W UTP5 Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 50 YJR053W BFA1 similar to Byr4 M[11] .WTTTCGCGTT Known: Swi4 down 1 50 YGL134W PCL10 PHO85 cyclin M[11] .WTTTCGCGTT Known: Swi4 down 1 50 YBR086C IST2 Probable transmembrane protein M[11] .WTTTCGCGTT Known: Swi4 down 1 50 YGR198W Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 49 YHR119W SET1 trithorax M[11] .WTTTCGCGTT Known: Swi4 down 1 49 YFL009W CDC4 part of a ubiquitin ligase complex M[11] .WTTTCGCGTT Known: Swi4 down 1 49 YOL036W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 49 YNL073W MSK1 mitochondrial lysine-tRNA synthetase M[11] .WTTTCGCGTT Known: Swi4 down 1 49 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[11] .WTTTCGCGTT Known: Swi4 down 1 48 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[11] .WTTTCGCGTT Known: Swi4 down 1 48 YKR038C Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 48 YOL137W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 48 YOL136C PFK27 6-phosphofructo-2-kinase M[11] .WTTTCGCGTT Known: Swi4 down 1 47 YOL005C RPB11 RNA polymerase II subunit, homologous to S. pombe Rpb11p subunit M[11] .WTTTCGCGTT Known: Swi4 down 1 47 YOL113W SKM1 serine/threonine protein kinase M[11] .WTTTCGCGTT Known: Swi4 down 1 47 YJL163C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 47 YGL117W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 46 YDL128W VCX1 vacuolar H+/Ca2+ exchanger M[11] .WTTTCGCGTT Known: Swi4 down 1 45 YBR117C TKL2 transketolase, homologous to tkl1 M[11] .WTTTCGCGTT Known: Swi4 down 1 45 YKL098W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 45 YOR281C PLP2 phosducin-like protein M[11] .WTTTCGCGTT Known: Swi4 down 1 45 YMR129W POM152 Nuclear pore membrane glycoprotein M[11] .WTTTCGCGTT Known: Swi4 down 1 44 YBL104C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 44 YDR099W BMH2 member of conserved eukaryotic 14-3-3 gene family M[11] .WTTTCGCGTT Known: Swi4 down 1 44 YHR094C HXT1 High-affinity hexose (glucose) transporter M[11] .WTTTCGCGTT Known: Swi4 down 1 44 YAL017W FUN31 Serine/threonine kinase M[11] .WTTTCGCGTT Known: Swi4 down 1 44 YDL155W CLB3 G(sub)2-specific B-type cyclin M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YER026C CHO1 phosphatidylserine synthase M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YER025W GCD11 gamma subunit of translational initiation factor eIF-2 M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YPL222W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YDR208W MSS4 Phosphatidylinositol 4-phosphate kinase M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YCR033W SNT1 M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YML002W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YKR041W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YPL195W APL5 delta-like subunit of the yeast AP-3 adaptin component of the membrane-associated clathrin assembly complex M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YDR179W-A Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YJL099W CHS6 involved in chitin biosynthesis M[11] .WTTTCGCGTT Known: Swi4 down 1 43 YNL268W LYP1 lysine permease M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YOR157C PUP1 putative proteasome subunit M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YDR310C SUM1 nuclear protein involved in silencing M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YBR067C TIP1 cell wall mannoprotein M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YMR093W UTP15 Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YKL049C CSE4 high similarity to histone H3 and to human centromere protein CENP-A M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YKR090W PXL1 Paxillin-like protein M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[11] .WTTTCGCGTT Known: Swi4 down 1 42 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[11] .WTTTCGCGTT Known: Swi4 down 1 41 YCL028W RNQ1 transferable epigenetic modifier M[11] .WTTTCGCGTT Known: Swi4 down 1 41 YKL192C ACP1 mitochondrial acyl carrier protein M[11] .WTTTCGCGTT Known: Swi4 down 1 41 YAL046C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YNL193W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YHR177W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YOR173W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YDR264C AKR1 Ankyrin repeat-containing protein M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YHR131C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YFR031C-A RPL2A Ribosomal protein L2A (L5A) (rp8) (YL6) M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YNL189W SRP1 karyopherin alpha homolog of 60 kDa M[11] .WTTTCGCGTT Known: Swi4 down 1 40 YEL041W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YHR085W Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YNL066W SUN4 Protein involved in the aging process M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YKL163W PIR3 Protein containing tandem internal repeats M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YKL162C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YEL063C CAN1 arginine permease M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YIL034C CAP2 beta subunit of capping protein M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YPL255W BBP1 Involved in mitotic and meitoic cell cycle M[11] .WTTTCGCGTT Known: Swi4 down 1 39 YNL110C NOP15 ribosome biogenesis protein M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YHR049W FSH1 M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YDR105C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YDR309C GIC2 Cdc42 binding protein, involved in bud emergence M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YOR330C MIP1 catalytic subunit of mitochondrial DNA polymerase M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YOL038W PRE6 alpha-type of subunit of 20S proteasome M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YNL103W MET4 member of the leucine zipper family of transcriptional activators M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YBR156C SLI15 Mitotic spindle protein involved in chromosome segregation. M[11] .WTTTCGCGTT Known: Swi4 down 1 38 YBR155W CNS1 component of Hsp90p chaperone machinery M[11] .WTTTCGCGTT Known: Swi4 down 1 37 YKR076W ECM4 (putative) involved in cell wall biogenesis M[11] .WTTTCGCGTT Known: Swi4 down 1 37 YOR145C Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 37 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[11] .WTTTCGCGTT Known: Swi4 down 1 37 YBR159W microsomal beta-keto-reductase M[11] .WTTTCGCGTT Known: Swi4 down 1 37 YOR034C AKR2 involved in constitutive endocytosis of Ste3p M[11] .WTTTCGCGTT Known: Swi4 down 1 37 YDL090C RAM1 beta subunit of farnesyltransferase M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YML031W NDC1 Nuclear envelope protein with multiple putative transmembrane domains M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YNL196C SLZ1 Sporulation-specific protein with a leucine zipper motif M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YDL144C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YGL161C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YGL162W SUT1 hypoxic gene family involved in sterol transport M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YJL157C FAR1 Cdc28p kinase inhibitor M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YOR371C KRH2 Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 36 YPL139C UME1 Transcriptional modulator M[11] .WTTTCGCGTT Known: Swi4 down 1 35 YJL194W CDC6 pre-initiation complex component M[11] .WTTTCGCGTT Known: Swi4 down 1 35 YNR053C NOG2 Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 35 YAL025C MAK16 putative nuclear protein M[11] .WTTTCGCGTT Known: Swi4 down 1 35 YDR527W Protein required for cell viability M[11] .WTTTCGCGTT Known: Swi4 down 1 35 YCL043C PDI1 protein disulfide isomerase M[11] .WTTTCGCGTT Known: Swi4 down 1 35 YDL133W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 34 YMR319C FET4 Low-affinity Fe(II) transport protein M[11] .WTTTCGCGTT Known: Swi4 down 1 34 YLR354C TAL1 Transaldolase, enzyme in the pentose phosphate pathway M[11] .WTTTCGCGTT Known: Swi4 down 1 34 YLR353W BUD8 involved in bud site selection M[11] .WTTTCGCGTT Known: Swi4 down 1 34 YIL065C FIS1 Involved in mitochondrial division M[11] .WTTTCGCGTT Known: Swi4 down 1 34 YFL016C MDJ1 DnaJ homolog involved in mitochondrial biogenesis and protein folding M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YKL067W YNK1 Nucleoside diphosphate kinase M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YKL065C YET1 Yeast endoplasmic reticulum 25 kDa transmembrane protein M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YJR044C VPS55 YJR044c M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YDR443C SSN2 transcription factor M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YMR042W ARG80 transcription factor M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YBR052C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YIL024C Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YHL014C YLF2 GTP-binding protein and glycogen phosphorylase (weak) M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YHL015W RPS20 Ribosomal protein S20 M[11] .WTTTCGCGTT Known: Swi4 down 1 33 YNL208W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 32 YMR017W SPO20 DBF2 Interacting Protein; SNAP 25 homolog M[11] .WTTTCGCGTT Known: Swi4 down 1 32 YBR121C GRS1 Glycyl-tRNA synthase M[11] .WTTTCGCGTT Known: Swi4 down 1 32 YLR095C IOC2 ISWI One Complex M[11] .WTTTCGCGTT Known: Swi4 down 1 32 YLR026C SED5 Sed5p is a t-SNARE (soluble NSF attachment protein receptor) required in ER to Golgi transport. M[11] .WTTTCGCGTT Known: Swi4 down 1 32 YLR025W SNF7 involved in glucose derepression M[11] .WTTTCGCGTT Known: Swi4 down 1 32 YMR237W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 31 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[11] .WTTTCGCGTT Known: Swi4 down 1 31 YER095W RAD51 RecA homolog; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer M[11] .WTTTCGCGTT Known: Swi4 down 1 31 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[11] .WTTTCGCGTT Known: Swi4 down 1 31 YBL022C PIM1 mitochondrial ATP-dependent protease M[11] .WTTTCGCGTT Known: Swi4 down 1 31 YHR005C-A MRS11 component of mitochondrial import machinery M[11] .WTTTCGCGTT Known: Swi4 down 1 31 YDR061W Hypothetical ORF M[11] .WTTTCGCGTT Known: Swi4 down 1 30 YDR087C RRP1 involved in rRNA processing M[11] M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 4 210 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 97 YDR264C AKR1 Ankyrin repeat-containing protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 95 YFL009W CDC4 part of a ubiquitin ligase complex M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 88 YDL193W Protein required for cell viability M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 87 YOL091W SPO21 involved in sporulation M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 86 YCR063W BUD31 M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 85 YIL142W CCT2 molecular chaperone M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 84 YNL103W MET4 member of the leucine zipper family of transcriptional activators M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 80 YML013W SEL1 M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 78 YER065C ICL1 isocitrate lyase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 77 YDR212W TCP1 chaperonin subunit alpha M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 77 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 2 70 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 58 YBR089C-A NHP6B 11-kDa nonhistone chromosomal protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 56 YCL009C ILV6 Small regulatory subunit of Acetolactate synthase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 56 YIL065C FIS1 Involved in mitochondrial division M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 53 YNL234W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 53 YOR145C Protein required for cell viability M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 53 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 52 YFR031C-A RPL2A Ribosomal protein L2A (L5A) (rp8) (YL6) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 52 YOL005C RPB11 RNA polymerase II subunit, homologous to S. pombe Rpb11p subunit M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 50 YPR184W GDB1 Glycogen debranching enzyme M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 49 YKR090W PXL1 Paxillin-like protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 49 YLR429W CRN1 has homology to the Dictyostelium and human actin-binding protein coronin M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 48 YDR384C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 48 YOR283W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 47 YPL268W PLC1 phosphoinositide-specific phospholipase C M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 46 YIL024C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 46 YHR109W CTM1 Cytochrome c methyltransferase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 45 YNL204C SPS18 Transcription factor M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 45 YEL046C GLY1 Threonine Aldolase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 45 YBL034C STU1 component of the mitotic spindle M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 45 YKL043W PHD1 putative transcription factor M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YDR354W TRP4 anthranilate phosphoribosyl transferase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YMR178W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YNL083W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YDR098C GRX3 Protein with glutaredoxin activity M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YMR199W CLN1 G(sub)1 cyclin M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YDR054C CDC34 ubiquitin-conjugating enzyme, E2 M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YOR367W SCP1 Calponin homolog M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 44 YLR314C CDC3 Septin; component of 10 nm filaments of mother-bud neck M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YDR059C UBC5 ubiquitin-conjugating enzyme M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YOR034C AKR2 involved in constitutive endocytosis of Ste3p M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YFL044C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YJR054W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YGR198W Protein required for cell viability M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YDR310C SUM1 nuclear protein involved in silencing M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YPL125W KAP120 karyopherin M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YOL036W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YOR236W DFR1 dihydrofolate reductase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YKL109W HAP4 transcriptional activator protein of CYC1 (component of HAP2/HAP3 heteromer) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YAL035W FUN12 97 kDa protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 43 YNL279W PRM1 pheromone-regulated membrane protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 42 YDL004W ATP16 ATP synthase delta subunit M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 42 YHR182W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 42 YJR044C VPS55 YJR044c M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 42 YMR163C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YKR076W ECM4 (putative) involved in cell wall biogenesis M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YDR221W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YIL131C FKH1 forkhead protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YDR527W Protein required for cell viability M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YJR031C GEA1 GDP/GTP exchange factor M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YNL271C BNI1 contains formin homology domains; homologous to BNR1 (BNI1 related protein) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YEL060C PRB1 vacuolar protease B M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 41 YDL100C ARR4 resistance to arsenicals M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YNL230C ELA1 elongin A M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YPR182W SMX3 Sm or Sm-like snRNP protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YJL047C RTT101 Regulator of Ty1 Transposition M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YKL090W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YJL183W MNN11 mannosyltransferase complex component M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YER103W SSA4 member of 70 kDa heat shock protein family M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YIL073C SPO22 meiosis-specific phospholipase A2 homolog M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YKL039W PTM1 Putative membrane protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 40 YMR017W SPO20 DBF2 Interacting Protein; SNAP 25 homolog M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 39 YDR349C YPS7 GPI-anchored aspartic protease M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 39 YKL038W RGT1 transcriptional repressor and activator M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 39 YHR194W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 39 YKR084C HBS1 Protein related to translation elongation factor EF-1alpha and to Suf12p/Sup2p/Gst1p/Sup35p M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 39 YPL016W SWI1 Zinc-finger transcription factor M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 39 YPL015C HST2 similar to Sir2p M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 38 YOL006C TOP1 topoisomerase I M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 38 YHR086W NAM8 putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 38 YPR134W MSS18 Involved in splicing of mitochondrial COX1 transcript M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 38 YGR112W SHY1 mitochondrial protein with homology to the mammalian SURF-1 gene M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 37 YFR051C RET2 vesicle coat component M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 37 YEL032W MCM3 component of DNA replication initiator complex M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 37 YDR317W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YOR271C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YPL231W FAS2 alpha subunit of fatty acid synthase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YOL083W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YPR078C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YMR260C TIF11 Translation initiation factor eIF1A M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YGR203W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 36 YPL230W Up in StarVation M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 35 YBL079W NUP170 Nucleoporin highly similar to Nup157p and to mammalian Nup155p (nup170 mutant can be complemented with NUP155) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 35 YBL078C AUT7 Aut7p has homology to LC3, a microtubule-associated protein from rat. M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 35 YOL131W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 35 YDR517W GRH1 Yeast homologue of mammalian GRASP proteins, also localised to the Golgi apparatus. M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 35 YBR097W VPS15 Myristoylated Serine/threonine protein kinase involved in vacuolar protein sorting M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 35 YKL081W TEF4 Translation elongation factor EF-1gamma M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 34 YOR307C SLY41 homolog of chloroplast phosphate transporter M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 34 YDR122W KIN1 Serine/threonine protein kinase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 34 YDR123C INO2 helix-loop-helix protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 34 YLR385C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YMR198W CIK1 spindle pole body associated protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YDR287W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YKL056C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YER119C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YPL176C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YLR307W CDA1 Chitin Deacetylase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 33 YDR518W EUG1 Protein disulfide isomerase homolog M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 32 YKR060W Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 32 YNL078W NIS1 Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 32 YML104C MDM1 intermediate filament protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 32 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YJL173C RFA3 subunit 3 of replication factor-A M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YJL174W KRE9 involved in beta-1,6-glucan assembly M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YOR330C MIP1 catalytic subunit of mitochondrial DNA polymerase M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YPL219W PCL8 cyclin (Pho85p) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YOL121C RPS19A 40S ribosomal protein S19A (S16aA) (rp55A) (YS16A) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YKR034W DAL80 negative regulator of multiple nitrogen catabolic genes M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 31 YMR077C VPS20 vaculolar protein sorting (putative) M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 30 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 30 YER158C Hypothetical ORF M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 30 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[12] ..TKACGCGTT. Known: Mbp1 /Swi6 (swi4-coocuring) down 1 30 YBR141C Hypothetical ORF M[12] M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 105 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 105 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 93 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 79 YGR248W SOL4 similar to SOL3 M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 79 YLR299W ECM38 gamma-glutamyltransferase homolog M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 76 YPL155C KIP2 kinesin-related protein M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 73 YPL231W FAS2 alpha subunit of fatty acid synthase M[13] STGCGG...ttTCT..G Novel: SOK2 down 2 72 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 71 YIR036C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 70 YKL094W YJU3 Product of gene unknown M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 69 YFL027C GYP8 Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 69 YMR273C ZDS1 peripheral plasma membrane protein M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 66 YGL254W FZF1 putative transcription factor, has five zinc fingers M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 63 YDR225W HTA1 Histone H2A (HTA1 and HTA2 code for nearly identical proteins) M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 62 YDL128W VCX1 vacuolar H+/Ca2+ exchanger M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 61 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 60 YBR239C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 60 YER080W Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 60 YBR201W DER1 involved in degradation in the ER M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 59 YPL184C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 59 YPL222W Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 57 YBR067C TIP1 cell wall mannoprotein M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 57 YHR005C-A MRS11 component of mitochondrial import machinery M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 56 YHR094C HXT1 High-affinity hexose (glucose) transporter M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 54 YNL079C TPM1 tropomyosin I M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 54 YJR072C Protein required for cell viability M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 53 YKL069W Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 53 YHR097C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 53 YER029C SMB1 U1 snRNP protein M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 53 YMR008C PLB1 Phospholipase B (lypophospholipase) M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 52 YOL082W CVT19 CVT20 M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 51 YJL145W SFH5 M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 51 YKR054C DYN1 heavy chain of cytoplasmic dynein M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 48 YGL097W SRM1 pheromone response pathway suppressor M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 48 YOR307C SLY41 homolog of chloroplast phosphate transporter M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 47 YJL018W Protein required for cell viability M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 46 YDR246W TRS23 TRAPP subunit of 23 kDa M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 46 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 46 YDR310C SUM1 nuclear protein involved in silencing M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 46 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 43 YPL176C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 43 YLL040C VPS13 component of peripheral vacuolar membrane protein complex M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 41 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 41 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 40 YMR251W Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 39 YKL045W PRI2 p58 polypeptide of DNA primase M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 39 YPR003C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 39 YPR002W PDH1 prpD homolog (ie the propionate operon of many prokaryotes and specifically, the gene called prpD in that operon) This gene may be regarded as *real* in yeast by two criteria: it has close homologs (some known to be essential for propionate utilization) in numerous prokaryotes (several of these homologs are called prpD), and it is transcribed in yeast. M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 38 YEL046C GLY1 Threonine Aldolase M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 38 YFR016C Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 38 YAL062W GDH3 NADP-linked glutamate dehydrogenase M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 38 YCR059C YIH1 M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 36 YGR125W Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 36 YMR104C YPK2 protein kinase M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 34 YPR023C EAF3 stable component of the NuA4 complex M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 34 YDL186W Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 34 YHR031C RRM3 DNA helicase M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 34 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 33 YNL218W MGS1 M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 32 YPL220W RPL1A Ribosomal protein L1A, forms part of the 60S ribosomal subunit M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 31 YFR021W AUT10 Hypothetical ORF M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 31 YGR059W SPR3 septin protein involved in sporulation M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 31 YOR033C EXO1 exonuclease M[13] STGCGG...ttTCT..G Novel: SOK2 down 1 30 YJR129C Hypothetical ORF M[13] M[14] YCTATTGTT Novel: RLM1-like down 3 109 YOR307C SLY41 homolog of chloroplast phosphate transporter M[14] YCTATTGTT Novel: RLM1-like down 3 106 YPL140C MKK2 protein kinase M[14] YCTATTGTT Novel: RLM1-like down 2 92 YMR273C ZDS1 peripheral plasma membrane protein M[14] YCTATTGTT Novel: RLM1-like down 2 90 YEL046C GLY1 Threonine Aldolase M[14] YCTATTGTT Novel: RLM1-like down 2 89 YFR021W AUT10 Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 2 88 YGR177C ATF2 Alcohol acetyltransferase M[14] YCTATTGTT Novel: RLM1-like down 2 88 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[14] YCTATTGTT Novel: RLM1-like down 2 87 YGR048W UFD1 ubiquitin fusion degradation protein M[14] YCTATTGTT Novel: RLM1-like down 2 83 YIL112W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 2 83 YPR156C TPO3 M[14] YCTATTGTT Novel: RLM1-like down 2 83 YOR043W WHI2 involved in growth regulation M[14] YCTATTGTT Novel: RLM1-like down 2 82 YER055C HIS1 ATP phosphoribosyltransferase M[14] YCTATTGTT Novel: RLM1-like down 2 81 YPL231W FAS2 alpha subunit of fatty acid synthase M[14] YCTATTGTT Novel: RLM1-like down 2 80 YGR240C PFK1 phosphofructokinase alpha subunit M[14] YCTATTGTT Novel: RLM1-like down 2 76 YER140W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 2 74 YKL056C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 2 74 YER114C BOI2 involved in bud formation, has SH3 domain M[14] YCTATTGTT Novel: RLM1-like down 2 73 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[14] YCTATTGTT Novel: RLM1-like down 2 73 YCL037C SRO9 RNA binding protein with La motif M[14] YCTATTGTT Novel: RLM1-like down 2 73 YPR184W GDB1 Glycogen debranching enzyme M[14] YCTATTGTT Novel: RLM1-like down 2 73 YJR121W ATP2 F(1)F(0)-ATPase complex beta subunit, mitochondrial M[14] YCTATTGTT Novel: RLM1-like down 2 73 YEL042W GDA1 Guanosine diphosphatase of Golgi membrane M[14] YCTATTGTT Novel: RLM1-like down 2 71 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[14] YCTATTGTT Novel: RLM1-like down 2 71 YPL055C LGE1 M[14] YCTATTGTT Novel: RLM1-like down 2 68 YPL176C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 2 67 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[14] YCTATTGTT Novel: RLM1-like down 2 66 YOR179C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 2 65 YNL288W CAF40 CCR4 Associated Factor 40 kDa M[14] YCTATTGTT Novel: RLM1-like down 2 65 YKL045W PRI2 p58 polypeptide of DNA primase M[14] YCTATTGTT Novel: RLM1-like down 2 64 YDR030C RAD28 involved in DNA repair, has WD repeats M[14] YCTATTGTT Novel: RLM1-like down 2 61 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[14] YCTATTGTT Novel: RLM1-like down 1 56 YER089C PTC2 Protein phosphatase type 2C M[14] YCTATTGTT Novel: RLM1-like down 1 55 YER093C-A Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 55 YCR018C SRD1 Transcription regulator M[14] YCTATTGTT Novel: RLM1-like down 1 55 YOR035C SHE4 Required for mother cell-specific HO expression M[14] YCTATTGTT Novel: RLM1-like down 1 54 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[14] YCTATTGTT Novel: RLM1-like down 1 54 YOL151W GRE2 putative reductase M[14] YCTATTGTT Novel: RLM1-like down 1 53 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[14] YCTATTGTT Novel: RLM1-like down 1 53 YMR016C SOK2 displays homologies to several transcription factors M[14] YCTATTGTT Novel: RLM1-like down 1 53 YPL040C ISM1 nuclear encoded mitochondrial isoleucyl-tRNA synthetase M[14] YCTATTGTT Novel: RLM1-like down 1 53 YKL073W LHS1 novel member of the Hsp70 family of molecular chaperones that localizes to the lumen of the endoplasmic reticulum: M[14] YCTATTGTT Novel: RLM1-like down 1 52 YPL223C GRE1 hydrophilic polypeptide with no known homology M[14] YCTATTGTT Novel: RLM1-like down 1 52 YER013W PRP22 helicase-like protein M[14] YCTATTGTT Novel: RLM1-like down 1 52 YGL022W STT3 Putative integral ER membrane protein; subunit of the oligosaccharyltransferase complex M[14] YCTATTGTT Novel: RLM1-like down 1 51 YKL141W SDH3 succinate dehydrogenase cytochrome b M[14] YCTATTGTT Novel: RLM1-like down 1 50 YPR035W GLN1 glutamine synthetase M[14] YCTATTGTT Novel: RLM1-like down 1 50 YJR115W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 50 YOL104C NDJ1 involved in meiotic chromosome segregation M[14] YCTATTGTT Novel: RLM1-like down 1 49 YOR332W VMA4 vacuolar ATPase V1 domain subunit E (27 kDa) M[14] YCTATTGTT Novel: RLM1-like down 1 49 YOL057W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 49 YJR124C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 49 YJR123W RPS5 Ribosomal protein S5 (S2) (rp14) (YS8) M[14] YCTATTGTT Novel: RLM1-like down 1 49 YLR412W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 49 YGL134W PCL10 PHO85 cyclin M[14] YCTATTGTT Novel: RLM1-like down 1 48 YDL186W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 48 YJR072C Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 48 YNL278W CAF120 CCR4 Associated Factor 120 kDa M[14] YCTATTGTT Novel: RLM1-like down 1 48 YNL264C PDR17 homologous to Pdr16p and Sec14p M[14] YCTATTGTT Novel: RLM1-like down 1 48 YPR169W Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 47 YPL022W RAD1 UV endonuclease M[14] YCTATTGTT Novel: RLM1-like down 1 47 YJR129C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 47 YKL162C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 47 YKL163W PIR3 Protein containing tandem internal repeats M[14] YCTATTGTT Novel: RLM1-like down 1 47 YIL145C PAN6 M[14] YCTATTGTT Novel: RLM1-like down 1 46 YMR321C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 46 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[14] YCTATTGTT Novel: RLM1-like down 1 44 YBR026C MRF1' Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence M[14] YCTATTGTT Novel: RLM1-like down 1 44 YIL073C SPO22 meiosis-specific phospholipase A2 homolog M[14] YCTATTGTT Novel: RLM1-like down 1 43 YDR018C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 43 YNR017W MAS6 23 kDa mitochondrial inner membrane protein M[14] YCTATTGTT Novel: RLM1-like down 1 43 YDR142C PEX7 Member of beta-transducin-related (WD-40) protein family M[14] YCTATTGTT Novel: RLM1-like down 1 43 YKR046C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 43 YHR008C SOD2 Manganese-containing superoxide dismutase M[14] YCTATTGTT Novel: RLM1-like down 1 42 YKR077W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 42 YMR177W MMT1 (putative) mitochondrial metal transporter M[14] YCTATTGTT Novel: RLM1-like down 1 42 YDL156W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 42 YDR293C SSD1 Product of gene unknown M[14] YCTATTGTT Novel: RLM1-like down 1 42 YDR273W DON1 M[14] YCTATTGTT Novel: RLM1-like down 1 42 YOR361C PRT1 translation initiation factor eIF3 subunit M[14] YCTATTGTT Novel: RLM1-like down 1 42 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[14] YCTATTGTT Novel: RLM1-like down 1 41 YBR128C APG14 involved in autophagy M[14] YCTATTGTT Novel: RLM1-like down 1 41 YDR211W GCD6 Translation initiation factor eIF-2B epsilon subunit M[14] YCTATTGTT Novel: RLM1-like down 1 41 YNL270C ALP1 Basic amino acid permease M[14] YCTATTGTT Novel: RLM1-like down 1 41 YDR439W LRS4 involved in rDNA silencing M[14] YCTATTGTT Novel: RLM1-like down 1 41 YBR213W MET8 Effector in the expression of PAPS reductase and sulfite reductase M[14] YCTATTGTT Novel: RLM1-like down 1 41 YGR204W ADE3 encodes the cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase M[14] YCTATTGTT Novel: RLM1-like down 1 41 YDL195W SEC31 Component (p150) of COPII coat of secretory pathway vesicles M[14] YCTATTGTT Novel: RLM1-like down 1 41 YOR065W CYT1 Cytochrome c1 M[14] YCTATTGTT Novel: RLM1-like down 1 41 YLR035C MLH2 MutL Homolog M[14] YCTATTGTT Novel: RLM1-like down 1 41 YLL028W TPO1 polyamine transport protein M[14] YCTATTGTT Novel: RLM1-like down 1 40 YBL021C HAP3 transcriptional activator protein of CYC1 M[14] YCTATTGTT Novel: RLM1-like down 1 40 YJL129C TRK1 180 kDa high affinity potassium transporter M[14] YCTATTGTT Novel: RLM1-like down 1 40 YJL167W ERG20 Farnesyl diphosphate synthetase (FPP synthetase) M[14] YCTATTGTT Novel: RLM1-like down 1 40 YOR171C LCB4 sphingoid long chain base (LCB) kinase M[14] YCTATTGTT Novel: RLM1-like down 1 40 YOR168W GLN4 glutaminyl-tRNA synthetase M[14] YCTATTGTT Novel: RLM1-like down 1 40 YHR178W STB5 Zinc finger (6-Cys) M[14] YCTATTGTT Novel: RLM1-like down 1 40 YGR277C Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 40 YDR212W TCP1 chaperonin subunit alpha M[14] YCTATTGTT Novel: RLM1-like down 1 40 YGL181W GTS1 Glycine-threonine-serine repeat protein M[14] YCTATTGTT Novel: RLM1-like down 1 40 YHR176W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 40 YDL214C PRR2 M[14] YCTATTGTT Novel: RLM1-like down 1 40 YNL068C FKH2 Fork Head homolog two M[14] YCTATTGTT Novel: RLM1-like down 1 40 YJL043W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 39 YMR202W ERG2 C-8 sterol isomerase M[14] YCTATTGTT Novel: RLM1-like down 1 39 YDL128W VCX1 vacuolar H+/Ca2+ exchanger M[14] YCTATTGTT Novel: RLM1-like down 1 39 YDR113C PDS1 42-kDa nuclear protein M[14] YCTATTGTT Novel: RLM1-like down 1 39 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[14] YCTATTGTT Novel: RLM1-like down 1 39 YFR016C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 39 YBR161W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 39 YBR162C TOS1 Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 39 YGR059W SPR3 septin protein involved in sporulation M[14] YCTATTGTT Novel: RLM1-like down 1 39 YML125C Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 39 YGL048C RPT6 ATPase M[14] YCTATTGTT Novel: RLM1-like down 1 39 YBL038W MRPL16 Mitochondrial ribosomal protein MRPL16 M[14] YCTATTGTT Novel: RLM1-like down 1 39 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[14] YCTATTGTT Novel: RLM1-like down 1 39 YER166W DNF1 Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 39 YDR049W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 39 YDR050C TPI1 triosephosphate isomerase M[14] YCTATTGTT Novel: RLM1-like down 1 39 YDR367W Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 38 YEL052W AFG1 ATPase family gene M[14] YCTATTGTT Novel: RLM1-like down 1 38 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[14] YCTATTGTT Novel: RLM1-like down 1 38 YEL023C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 38 YEL024W RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M[14] YCTATTGTT Novel: RLM1-like down 1 38 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[14] YCTATTGTT Novel: RLM1-like down 1 38 YIL126W STH1 helicase related protein, snf2 homolog M[14] YCTATTGTT Novel: RLM1-like down 1 38 YAL020C ATS1 similarity to human RCC1 protein M[14] YCTATTGTT Novel: RLM1-like down 1 38 YIL019W Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 38 YLR049C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 38 YLR048W RPS0B Ribosomal protein S0B M[14] YCTATTGTT Novel: RLM1-like down 1 38 YLR307W CDA1 Chitin Deacetylase M[14] YCTATTGTT Novel: RLM1-like down 1 38 YOR370C MRS6 Rab geranylgeranyltransferase regulatory subunit M[14] YCTATTGTT Novel: RLM1-like down 1 37 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[14] YCTATTGTT Novel: RLM1-like down 1 37 YGR148C RPL24B Ribosomal protein L24B (rp29) (YL21) (L30B) M[14] YCTATTGTT Novel: RLM1-like down 1 37 YGL099W LSG1 Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 37 YNL268W LYP1 lysine permease M[14] YCTATTGTT Novel: RLM1-like down 1 37 YER088C DOT6 nuclear protein with Myb domain involved in telomeric silencing M[14] YCTATTGTT Novel: RLM1-like down 1 37 YJR060W CBF1 basic helix-loop-helix protein M[14] YCTATTGTT Novel: RLM1-like down 1 37 YHR182W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 37 YOL137W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 37 YOL136C PFK27 6-phosphofructo-2-kinase M[14] YCTATTGTT Novel: RLM1-like down 1 37 YBR197C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 37 YJL105W SET4 M[14] YCTATTGTT Novel: RLM1-like down 1 37 YOR236W DFR1 dihydrofolate reductase M[14] YCTATTGTT Novel: RLM1-like down 1 37 YNL192W CHS1 chitin synthase 1 M[14] YCTATTGTT Novel: RLM1-like down 1 37 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[14] YCTATTGTT Novel: RLM1-like down 1 37 YOR229W WTM2 Transcriptional modulator M[14] YCTATTGTT Novel: RLM1-like down 1 37 YCR035C RRP43 Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p). M[14] YCTATTGTT Novel: RLM1-like down 1 37 YCR034W FEN1 Probable subunit of 1,3-beta-glucan synthase; homolog of ELO1 M[14] YCTATTGTT Novel: RLM1-like down 1 37 YDR086C SSS1 endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex M[14] YCTATTGTT Novel: RLM1-like down 1 37 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[14] YCTATTGTT Novel: RLM1-like down 1 37 YGL192W IME4 mRNA methyltransferase (putative) M[14] YCTATTGTT Novel: RLM1-like down 1 36 YJR017C ESS1 Peptidyl-prolyl cis/trans isomerase (PPIase) M[14] YCTATTGTT Novel: RLM1-like down 1 36 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[14] YCTATTGTT Novel: RLM1-like down 1 36 YOR134W BAG7 GTPase activating protein (GAP) M[14] YCTATTGTT Novel: RLM1-like down 1 36 YML002W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 36 YPL126W NAN1 Net1-Associated Nucleolar protein 1 M[14] YCTATTGTT Novel: RLM1-like down 1 36 YFL048C EMP47 47 kDa type I transmembrane protein localized to the Golgi M[14] YCTATTGTT Novel: RLM1-like down 1 36 YFL049W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 36 YOR204W DED1 ATP-dependent RNA helicase of DEAD box family M[14] YCTATTGTT Novel: RLM1-like down 1 36 YOR205C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 36 YKR090W PXL1 Paxillin-like protein M[14] YCTATTGTT Novel: RLM1-like down 1 36 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[14] YCTATTGTT Novel: RLM1-like down 1 36 YBR239C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 36 YKL151C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 36 YDL076C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 36 YPR006C ICL2 Isocitrate lyase, may be nonfunctional M[14] YCTATTGTT Novel: RLM1-like down 1 36 YFR031C-A RPL2A Ribosomal protein L2A (L5A) (rp8) (YL6) M[14] YCTATTGTT Novel: RLM1-like down 1 36 YPR008W HAA1 Homolog of Ace1 Activator M[14] YCTATTGTT Novel: RLM1-like down 1 35 YFR022W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YIL065C FIS1 Involved in mitochondrial division M[14] YCTATTGTT Novel: RLM1-like down 1 35 YLR047C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YFR033C QCR6 ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa) M[14] YCTATTGTT Novel: RLM1-like down 1 35 YGR110W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YKR054C DYN1 heavy chain of cytoplasmic dynein M[14] YCTATTGTT Novel: RLM1-like down 1 35 YDR374C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YDR373W FRQ1 Product of gene unknown M[14] YCTATTGTT Novel: RLM1-like down 1 35 YNL024C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YMR237W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YKL130C SHE2 involved in cell polarity M[14] YCTATTGTT Novel: RLM1-like down 1 35 YGR178C PBP1 interacts with poly(A)-binding protein M[14] YCTATTGTT Novel: RLM1-like down 1 35 YDR301W CFT1 Component of pre-mRNA cleavage factor II (CFII); 150-kDa protein associated with polyadenylation factor 1 (PF I) M[14] YCTATTGTT Novel: RLM1-like down 1 35 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[14] YCTATTGTT Novel: RLM1-like down 1 35 YGR006W PRP18 RNA splicing factor associated with U5 snRNP M[14] YCTATTGTT Novel: RLM1-like down 1 35 YGL036W Mtf1 Two Hybrid Clone 2 M[14] YCTATTGTT Novel: RLM1-like down 1 35 YGL035C MIG1 C2H2 zinc finger protein which resembles the mammalian Egr and Wilms tumour proteins M[14] YCTATTGTT Novel: RLM1-like down 1 35 YFR048W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YDL144C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YNR051C BRE5 protein of unknown function M[14] YCTATTGTT Novel: RLM1-like down 1 35 YDR282C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YML059C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 35 YML060W OGG1 43-kDa 8-oxo-guanine DNA glycosylase M[14] YCTATTGTT Novel: RLM1-like down 1 34 YBR126C TPS1 56 kD synthase subunit of trehalose-6-phosphate synthase/phosphatase complex M[14] YCTATTGTT Novel: RLM1-like down 1 34 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[14] YCTATTGTT Novel: RLM1-like down 1 34 YBR199W KTR4 Putative alpha-1,2-mannosyltransferase M[14] YCTATTGTT Novel: RLM1-like down 1 34 YHR155W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 34 YHR156C LIN1 Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 34 YCL011C GBP2 Protein with RNA recognition motifs M[14] YCTATTGTT Novel: RLM1-like down 1 34 YCL014W BUD3 involved in bud site selection M[14] YCTATTGTT Novel: RLM1-like down 1 34 YLR303W MET17 O-Acetylhomoserine-O-Acetylserine Sulfhydralase M[14] YCTATTGTT Novel: RLM1-like down 1 34 YLR304C ACO1 Aconitase, mitochondrial M[14] YCTATTGTT Novel: RLM1-like down 1 34 YHR094C HXT1 High-affinity hexose (glucose) transporter M[14] YCTATTGTT Novel: RLM1-like down 1 34 YCR005C CIT2 non-mitochondrial citrate synthase M[14] YCTATTGTT Novel: RLM1-like down 1 34 YOR372C NDD1 Nuclear Division Defective 1 M[14] YCTATTGTT Novel: RLM1-like down 1 34 YDL044C MTF2 involved in mRNA splicing M[14] YCTATTGTT Novel: RLM1-like down 1 34 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[14] YCTATTGTT Novel: RLM1-like down 1 34 YGR001C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 34 YJL145W SFH5 M[14] YCTATTGTT Novel: RLM1-like down 1 34 YLR371W ROM2 GDP-GTP Exchange Protein (GEP) for Rho1p M[14] YCTATTGTT Novel: RLM1-like down 1 34 YOR021C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 34 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[14] YCTATTGTT Novel: RLM1-like down 1 34 YGR092W DBF2 Serine/threonine protein kinase M[14] YCTATTGTT Novel: RLM1-like down 1 34 YDR305C HNT2 member of the histidine triad family M[14] YCTATTGTT Novel: RLM1-like down 1 34 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[14] YCTATTGTT Novel: RLM1-like down 1 34 YNR032C-A HUB1 ubiquitin-like modifier M[14] YCTATTGTT Novel: RLM1-like down 1 34 YNR032W PPG1 Serine/threonine protein phosphatase type 2A M[14] YCTATTGTT Novel: RLM1-like down 1 34 YDL181W INH1 ATPase inhibitor M[14] YCTATTGTT Novel: RLM1-like down 1 34 YHR031C RRM3 DNA helicase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[14] YCTATTGTT Novel: RLM1-like down 1 33 YDR231C COX20 protein required for maturation and assembly of cytochrome oxidase subunit II M[14] YCTATTGTT Novel: RLM1-like down 1 33 YDR229W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YIL003W DRE3 Protein required for cell viability M[14] YCTATTGTT Novel: RLM1-like down 1 33 YIL002C INP51 phosphatidylinositol 4,5-bisphosphate 5-phosphatase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[14] YCTATTGTT Novel: RLM1-like down 1 33 YML071C DOR1 Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YDL091C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YDL092W SRP14 Signal recognition particle subunit M[14] YCTATTGTT Novel: RLM1-like down 1 33 YGR016W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YCL052C PBN1 Protease B, nonderepressible form M[14] YCTATTGTT Novel: RLM1-like down 1 33 YCL054W SPB1 Putative methyltransferase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YOR233W KIN4 protein kinase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YOR234C RPL33B Ribosomal protein L33B (L37B) (rp47) (YL37) M[14] YCTATTGTT Novel: RLM1-like down 1 33 YMR205C PFK2 phosphofructokinase beta subunit M[14] YCTATTGTT Novel: RLM1-like down 1 33 YPR065W ROX1 HMG-domain site-specific DNA binding protein. M[14] YCTATTGTT Novel: RLM1-like down 1 33 YHR205W SCH9 cAMP-dependent protein kinase homolog, suppressor of cdc25ts M[14] YCTATTGTT Novel: RLM1-like down 1 33 YHR104W GRE3 a keto-aldose reductase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YDR075W PPH3 protein phosphatase type 2A M[14] YCTATTGTT Novel: RLM1-like down 1 33 YLR040C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YGR283C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YNL054W VAC7 Integral vacuolar membrane protein M[14] YCTATTGTT Novel: RLM1-like down 1 33 YBR062C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YEL049W PAU2 similar to members of the seripauperin (PAU) family M[14] YCTATTGTT Novel: RLM1-like down 1 33 YEL048C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YLR074C BUD20 M[14] YCTATTGTT Novel: RLM1-like down 1 33 YPR027C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YPR026W ATH1 Acid trehalase M[14] YCTATTGTT Novel: RLM1-like down 1 33 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[14] YCTATTGTT Novel: RLM1-like down 1 33 YIR007W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 33 YIR008C PRI1 p48 polypeptide of DNA primase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YNL200C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 32 YBR201W DER1 involved in degradation in the ER M[14] YCTATTGTT Novel: RLM1-like down 1 32 YBR112C CYC8 Transcription regulatory protein M[14] YCTATTGTT Novel: RLM1-like down 1 32 YCR009C RVS161 Reduced viability on starvation protein RVS161 M[14] YCTATTGTT Novel: RLM1-like down 1 32 YCR008W SAT4 Ser/Thr protein kinase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YLR287C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDR111C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDR110W FOB1 DNA replication fork blocking protein M[14] YCTATTGTT Novel: RLM1-like down 1 32 YHR190W ERG9 squalene synthetase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YHR191C CTF8 (putative) kinetochore protein M[14] YCTATTGTT Novel: RLM1-like down 1 32 YML110C COQ5 Putative mitochondrial C-methyltransferase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YML111W BUL2 (putative) ubiquitin-mediated protein degradation M[14] YCTATTGTT Novel: RLM1-like down 1 32 YNL299W TRF5 exhibits homology to Trf4p and Top1p M[14] YCTATTGTT Novel: RLM1-like down 1 32 YHR202W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 32 YHR203C RPS4B Ribosomal protein S4B (YS6) (rp5) (S7B) M[14] YCTATTGTT Novel: RLM1-like down 1 32 YPL093W NOG1 (putative) nucleolar G-protein; homologs identified in human and Trypanosoma brucei M[14] YCTATTGTT Novel: RLM1-like down 1 32 YGR086C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 32 YOR126C IAH1 isoamyl acetate-hydrolyzing esterase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YOR330C MIP1 catalytic subunit of mitochondrial DNA polymerase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YER095W RAD51 RecA homolog; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer M[14] YCTATTGTT Novel: RLM1-like down 1 32 YGR203W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDL194W SNF3 glucose sensor M[14] YCTATTGTT Novel: RLM1-like down 1 32 YHR091C MSR1 Arginyl-tRNA synthetase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDL006W PTC1 serine-threonine protein phosphatase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDL005C MED2 Stoichiometric member of mediator complex M[14] YCTATTGTT Novel: RLM1-like down 1 32 YCR004C YCP4 FMN-binding protein M[14] YCTATTGTT Novel: RLM1-like down 1 32 YCR003W MRPL32 Mitochondrial ribosomal protein MRPL32 (YmL32) M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDL161W ENT1 Ent1p M[14] YCTATTGTT Novel: RLM1-like down 1 32 YDL160C DHH1 (putative) DEAD box RNA helicase M[14] YCTATTGTT Novel: RLM1-like down 1 32 YBR046C ZTA1 Homolog to quinone oxidoreductase (E. coli) M[14] YCTATTGTT Novel: RLM1-like down 1 32 YNL166C BNI5 bud neck protein M[14] YCTATTGTT Novel: RLM1-like down 1 31 YIR022W SEC11 signal peptidase subunit M[14] YCTATTGTT Novel: RLM1-like down 1 31 YPR113W PIS1 phosphatidylinositol synthase M[14] YCTATTGTT Novel: RLM1-like down 1 31 YOR354C MSC6 M[14] YCTATTGTT Novel: RLM1-like down 1 31 YOR230W WTM1 Transcriptional modulator M[14] YCTATTGTT Novel: RLM1-like down 1 31 YJL209W CBP1 involved in control of mRNA stablility M[14] YCTATTGTT Novel: RLM1-like down 1 31 YJL208C NUC1 mitochondrial nuclease M[14] YCTATTGTT Novel: RLM1-like down 1 31 YDR463W STP1 Nuclear-localized protein containing zinc finger motifs M[14] YCTATTGTT Novel: RLM1-like down 1 31 YMR258C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 31 YGL234W ADE5,7 glycinamide ribotide synthetase and aminoimidazole ribotide synthetase M[14] YCTATTGTT Novel: RLM1-like down 1 31 YNL016W PUB1 poly(A)+ RNA-binding protein M[14] YCTATTGTT Novel: RLM1-like down 1 31 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[14] YCTATTGTT Novel: RLM1-like down 1 31 YKR037C SPC34 component of spindle pole M[14] YCTATTGTT Novel: RLM1-like down 1 31 YDL063C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 31 YDL064W UBC9 ubiquitin-conjugating enzyme M[14] YCTATTGTT Novel: RLM1-like down 1 31 YBR067C TIP1 cell wall mannoprotein M[14] YCTATTGTT Novel: RLM1-like down 1 31 YML058W SML1 Suppressor of mec lethality M[14] YCTATTGTT Novel: RLM1-like down 1 31 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[14] YCTATTGTT Novel: RLM1-like down 1 31 YPL252C YAH1 iron-sulfur protein homologous to human adrenodoxin M[14] YCTATTGTT Novel: RLM1-like down 1 31 YNL116W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 31 YNL115C Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 31 YBR256C RIB5 Riboflavin synthase alpha-chain M[14] YCTATTGTT Novel: RLM1-like down 1 31 YHR142W CHS7 The seventh gene identified that is involved in chitin synthesis; involved in Chs3p export from the ER M[14] YCTATTGTT Novel: RLM1-like down 1 31 YLR380W CSR1 chs5 spa2 rescue; isolated as a multicopy suppressor of the lethality of chs5 spa2 double mutant at 37 degrees. M[14] YCTATTGTT Novel: RLM1-like down 1 31 YNL103W MET4 member of the leucine zipper family of transcriptional activators M[14] YCTATTGTT Novel: RLM1-like down 1 30 YAL022C FUN26 predicted membrane protein M[14] YCTATTGTT Novel: RLM1-like down 1 30 YMR043W MCM1 transcription factor containing the 56 amino-acid MADS (MCM1, AG, DEFAm SRF)-box motif within its DNA binding domain, plays a central role in the formation of both repressor and activator complexes M[14] YCTATTGTT Novel: RLM1-like down 1 30 YOL056W GPM3 phosphoglycerate mutase M[14] YCTATTGTT Novel: RLM1-like down 1 30 YOL055C THI20 THI for thiamine metabolism. Transcribed in the presence of low level of thiamine (10-8M) and turned off in the presence of high level (10-6M) of thiamine. Under the positive control of THI2 and THI3. M[14] YCTATTGTT Novel: RLM1-like down 1 30 YPL219W PCL8 cyclin (Pho85p) M[14] YCTATTGTT Novel: RLM1-like down 1 30 YMR191W Hypothetical ORF M[14] YCTATTGTT Novel: RLM1-like down 1 30 YJR141W Protein required for cell viability M[14] M[15] TTTTGCCACCG Known: Rpn4/Met4 down 2 106 YOR054C Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 73 YDR425W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 73 YHR028C DAP2 Dipeptidyl aminopeptidase B (DPAP B) M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 73 YDL125C HNT1 similarity to protein kinase C inhibitor-I M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 72 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 72 YOR363C PIP2 activator of peroxisome proliferation M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 70 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 70 YIL074C SER33 3-phosphoglycerate dehydrogenase M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 61 YEL036C ANP1 subunit of mannosyltransferase complex M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 60 YOL132W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 60 YML091C RPM2 subunit of mitochondrial RNase P M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 60 YKL146W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 60 YGR134W CAF130 CCR4 Associated Factor 130 kDa M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 60 YBL021C HAP3 transcriptional activator protein of CYC1 M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 59 YDR393W SHE9 similar to Arabidopsis Cip1, lethal when overexpressed M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 56 YBR117C TKL2 transketolase, homologous to tkl1 M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 56 YBL059W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 53 YLL038C ENT4 Ent4p M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 51 YBR063C Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 48 YGL063W PUS2 pseudouridine synthase 2 M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 48 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 47 YJL151C SNA3 Small integral membrane protein M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 47 YBR083W TEC1 transcription factor of the TEA/ATTS DNA-binding domain family, regulator of Ty1 expression M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 47 YER020W GPA2 nucleotide binding regulatory protein M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 47 YBR050C REG2 putative Glc7 regulatory subunit M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 47 YOR337W TEA1 Ty1 enhancer activator M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 47 YFR051C RET2 vesicle coat component M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 46 YPR015C Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 46 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 46 YGR059W SPR3 septin protein involved in sporulation M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 46 YPL036W PMA2 plasma membrane ATPase M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 46 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 45 YGR096W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 45 YFL042C Due to a sequence change (deletion of G at 46151), YFL043C is now part of YFL042C. M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 45 YGL192W IME4 mRNA methyltransferase (putative) M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 44 YMR251W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 44 YGR141W VPS62 M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 41 YJR063W RPA12 A12.2 subunit of RNA polymerase I M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 41 YDR430C CYM1 Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 41 YKL192C ACP1 mitochondrial acyl carrier protein M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 40 YOL097C WRS1 cytoplasmic tryptophanyl-tRNA synthetase M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 37 YDL133W Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 35 YBR241C Hypothetical ORF M[15] TTTTGCCACCG Known: Rpn4/Met4 down 1 34 YFR009W GCN20 Member of ATP-binding cassette (ABC) family of proteins M[15] M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 3 162 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 3 161 YHR142W CHS7 The seventh gene identified that is involved in chitin synthesis; involved in Chs3p export from the ER M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 4 156 YCL055W KAR4 transcription factor involved in karyogamy M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 3 153 YPL140C MKK2 protein kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 101 YNL153C GIM3 bovine prefoldin subunit 4 homolog (putative) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 100 YER090W TRP2 anthranilate synthase Component I M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 100 YER091C MET6 vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 97 YGL022W STT3 Putative integral ER membrane protein; subunit of the oligosaccharyltransferase complex M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 90 YOR138C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 88 YDL139C SCM3 Suppressor of chromosome missegregation M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 87 YLR045C STU2 spindle pole body component M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 87 YOR052C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 87 YBR201W DER1 involved in degradation in the ER M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 86 YCR023C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 83 YDR463W STP1 Nuclear-localized protein containing zinc finger motifs M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 79 YLL031C GPI13 phosphoryltransferase that adds phosphoethanolamine to the third mannose residue of the GPI anchor precursor M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 75 YGL027C CWH41 glucosidase I M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 70 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 69 YBR067C TIP1 cell wall mannoprotein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 68 YCR095C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 68 YCR094W CDC50 involved in cell cycle M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 68 YNL024C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 67 YDL227C HO Homothallic switching endonuclease M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 2 67 YDL229W SSB1 cytoplasmic member of the HSP70 family M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 66 YDL100C ARR4 resistance to arsenicals M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 66 YCR092C MSH3 mutS homolog, forms a complex with Msh2p to repair insertion-deletion mispairs; redundant with Pms3/Msh6p in repair of insertion-deletion mispairs M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 66 YCR091W KIN82 Putative serine/threonine protein kinase most similar to cyclic nucleotide-dependent protein kinase subfamily and the protein kinase C subfamily M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 65 YBL098W BNA4 YBL098W M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 64 YGR091W PRP31 pre-mRNA splicing protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 62 YMR205C PFK2 phosphofructokinase beta subunit M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 62 YDL156W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 59 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 57 YGL048C RPT6 ATPase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 57 YKL038W RGT1 transcriptional repressor and activator M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 54 YNR017W MAS6 23 kDa mitochondrial inner membrane protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 53 YBL033C RIB1 GTP cyclohydrolase II M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 53 YER176W ECM32 DNA Helicase I M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YPR105C COD1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YLR352W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YHR165C PRP8 U5 snRNP and spliceosome component M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YDR264C AKR1 Ankyrin repeat-containing protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 52 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 51 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 51 YNL166C BNI5 bud neck protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 50 YML079W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 50 YPL031C PHO85 cyclin-dependent protein kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 50 YGL067W NPY1 NADH pyrophosphatase 1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 50 YHR097C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 49 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 49 YER021W RPN3 component of the regulatory module of the 26S proteasome, homologous to human p58 subunit M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 48 YNL190W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 48 YIL138C TPM2 Tropomyosin isoform 2 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 48 YHR085W Protein required for cell viability M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 47 YNL056W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 47 YNL055C POR1 Outer mitochondrial membrane porin (voltage-dependent anion channel, or VDAC) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 47 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 47 YCR076C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 47 YIR009W MSL1 encodes YU2B, a component of yeast U2 snRNP M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 47 YNL217W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YDR354W TRP4 anthranilate phosphoribosyl transferase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YOR006C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YAL046C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YBR240C THI2 Probable Zn-finger protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YPL252C YAH1 iron-sulfur protein homologous to human adrenodoxin M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YIL065C FIS1 Involved in mitochondrial division M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YPL212C PUS1 intranuclear protein which exhibits a nucleotide-specific intron-dependent tRNA pseudouridine synthase activity M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YPL213W LEA1 similar to human U2A' snRNP protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 46 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 45 YHR181W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 45 YNL242W APG2 Required for sporulation. M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 45 YNL241C ZWF1 Glucose-6-phosphate dehydrogenase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 45 YOR033C EXO1 exonuclease M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 44 YJR052W RAD7 nucleotide excision NEF4 component M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 44 YMR258C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 44 YFL044C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 44 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YMR043W MCM1 transcription factor containing the 56 amino-acid MADS (MCM1, AG, DEFAm SRF)-box motif within its DNA binding domain, plays a central role in the formation of both repressor and activator complexes M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YNL104C LEU4 alpha-isopropylmalate synthase (2-Isopropylmalate Synthase) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YLR303W MET17 O-Acetylhomoserine-O-Acetylserine Sulfhydralase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YLR304C ACO1 Aconitase, mitochondrial M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YFL040W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YFL039C ACT1 Actin M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YNL116W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YNL115C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YBR050C REG2 putative Glc7 regulatory subunit M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YGR013W SNU71 U1 snRNP protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YIL083C Protein required for cell viability M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 43 YKL098W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YKR041W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YGR177C ATF2 Alcohol acetyltransferase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YLR287C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YMR310C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YLR295C ATP14 ATP synthase subunit h M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YMR198W CIK1 spindle pole body associated protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YMR117C SPC24 component of spindle pole M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 42 YGL103W RPL28 Ribosomal protein L28 (L29) (rp44) (YL24) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YDR477W SNF1 protein serine/threonine kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YBR183W YPC1 alkaline ceramidase with reverse activity M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YNR004W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YCR010C ADY2 Protein involved in Accumulation of DYads M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YBL051C PIN4 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YGL189C RPS26A Ribosomal protein S26A M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 41 YAR019C CDC15 protein kinase domain M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YBR070C Protein required for cell viability M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YJL043W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YOR233W KIN4 protein kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YOR234C RPL33B Ribosomal protein L33B (L37B) (rp47) (YL37) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YJL157C FAR1 Cdc28p kinase inhibitor M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YER044C ERG28 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YJL052W TDH1 Glyceraldehyde-3-phosphate dehydrogenase 1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 40 YCL010C SGF29 Probable 29kKDa Subunit of SAGA histone acetyltransferase complex M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 39 YCR005C CIT2 non-mitochondrial citrate synthase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 39 YDR006C SOK1 high copy suppressor of cAMP-dependent protein kinase A temperature-sensitive mutations M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 39 YER064C mutation leads to reduction of ERG9 expression M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 39 YER063W THO1 (putative) involved in transcription M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 39 YPR118W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 39 YDL077C VAM6 involved in vacuolar morphogenesis M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YER177W BMH1 Homolog of mammalian 14-3-3 proteins M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YCR083W TRX3 mitochondrial thioredoxin M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YCR084C TUP1 glucose repression regulatory protein, exhibits similarity to beta subunits of G proteins M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YOL040C RPS15 40S ribosomal protein S15 (S21) (rp52) (RIG protein) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YGL117W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 38 YKL043W PHD1 putative transcription factor M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YHR072W-A NOP10 Component of H/ACA-box snoRNPs M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YMR009W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YLR267W BOP2 Bypass of PAM1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YDR517W GRH1 Yeast homologue of mammalian GRASP proteins, also localised to the Golgi apparatus. M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YOR096W RPS7A Ribosomal protein S7A (rp30) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YOR097C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 37 YNL094W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YKR037C SPC34 component of spindle pole M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YML062C MFT1 mitochondrial targeting protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YML063W RPS1B Ribosomal protein S1B (rp10B) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YHR182W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YDR456W NHX1 Na+/H+ exchanger M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YPL041C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YHR083W Protein required for cell viability M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YPL074W YTA6 AAA family ATPase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YDR245W MNN10 galactosyltransferase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 36 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YPL154C PEP4 vacuolar proteinase A M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YBL030C PET9 mitochondrial ADP/ATP translocator M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YBL031W SHE1 Product of gene unknown M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YNL161W CBK1 Protein kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YNL078W NIS1 Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YNL098C RAS2 Small, GTP-binding protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YNL077W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 35 YPL201C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YGL070C RPB9 RNA polymerase II subunit M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YGL071W RCS1 Putative transcription factor that binds the consensus site PyPuCACCCPu M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YHR171W APG7 similar to ubiquitin-activating enzymes, involved in autophagy M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YKR099W BAS1 transcription factor M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YKR100C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YGL008C PMA1 plasma membrane H+-ATPase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YJL031C BET4 Geranylgeranyltransferase Type II alpha subunit (PGGTase-II, alpha subunit) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YJL033W HCA4 putative RNA helicase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YKR059W TIF1 translation initiation factor eIF4A M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YML013W SEL1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 34 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YPL223C GRE1 hydrophilic polypeptide with no known homology M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YGL061C DUO1 Death Upon Overexpression M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YGL062W PYC1 pyruvate carboxylase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YMR080C NAM7 putative helicase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YMR079W SEC14 phosphatidylinositol transfer protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YBR141C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YGR037C ACB1 Acyl-CoA-binding protein (ACBP)/Diazepam binding inhibitor (DBI)/endozepine (EP) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YMR187C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YMR186W HSC82 constitutively expressed heat shock protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YKL109W HAP4 transcriptional activator protein of CYC1 (component of HAP2/HAP3 heteromer) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YEL037C RAD23 ubiquitin-like protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 33 YEL038W UTR4 Product of gene unknown M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YPL186C UIP4 YPL186C M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YPL187W MF(ALPHA)1 mating factor alpha M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YER004W Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YJR125C ENT3 Ent3p M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YNL016W PUB1 poly(A)+ RNA-binding protein M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YGR250C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YGR249W MGA1 Mga1p shows similarity to heat shock transcription factor M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YDR394W RPT3 ATPase (AAA family) component of the 26S proteasome complex M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YGR283C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YJR124C Hypothetical ORF M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YJR123W RPS5 Ribosomal protein S5 (S2) (rp14) (YS8) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YMR261C TPS3 115 kD regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 32 YPR008W HAA1 Homolog of Ace1 Activator M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 31 YNL192W CHS1 chitin synthase 1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 31 YPR079W MRL1 M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 31 YJL191W RPS14B Ribosomal protein S14B (rp59B) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 31 YJL190C RPS22A Ribosomal protein S22A (S24A) (rp50) (YS22) M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 30 YKL048C ELM1 protein kinase M[16] tTTGTTTAC.TTT Known: Fkh1/2 down 1 30 YJR122W CAF17 component of CCR4 transcriptional complex M[16] M[17] RVACCCTD Known: Aft1 down 2 78 YNL268W LYP1 lysine permease M[17] RVACCCTD Known: Aft1 down 2 74 YNL243W SLA2 transmembrane protein M[17] RVACCCTD Known: Aft1 down 1 42 YLR035C MLH2 MutL Homolog M[17] RVACCCTD Known: Aft1 down 1 42 YER095W RAD51 RecA homolog; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer M[17] RVACCCTD Known: Aft1 down 1 42 YML086C ALO1 D-arabinono-1,4-lactone oxidase M[17] RVACCCTD Known: Aft1 down 1 42 YNL263C YIF1 Similar to NADH dehydrogenases M[17] RVACCCTD Known: Aft1 down 1 42 YOR312C RPL20B 60S ribosomal protein L20B (L18B) M[17] RVACCCTD Known: Aft1 down 1 41 YDR007W TRP1 n-(5'-phosphoribosyl)-anthranilate isomerase M[17] RVACCCTD Known: Aft1 down 1 41 YHL022C SPO11 Encodes one of the earliest meiosis-specific recombination functions. M[17] RVACCCTD Known: Aft1 down 1 41 YOR222W ODC2 M[17] RVACCCTD Known: Aft1 down 1 41 YDR527W Protein required for cell viability M[17] RVACCCTD Known: Aft1 down 1 41 YCL016C DCC1 M[17] RVACCCTD Known: Aft1 down 1 41 YDR113C PDS1 42-kDa nuclear protein M[17] RVACCCTD Known: Aft1 down 1 41 YKL065C YET1 Yeast endoplasmic reticulum 25 kDa transmembrane protein M[17] RVACCCTD Known: Aft1 down 1 41 YKL067W YNK1 Nucleoside diphosphate kinase M[17] RVACCCTD Known: Aft1 down 1 41 YMR044W IOC4 ISWI One Complex M[17] RVACCCTD Known: Aft1 down 1 41 YMR047C NUP116 Nuclear pore complex protein that is member of GLFG repeat-containing family of nucleoporins and is highly homologous to Nup100p M[17] RVACCCTD Known: Aft1 down 1 41 YLR009W RLP24 Ribosomal Like Protein 24 M[17] RVACCCTD Known: Aft1 down 1 41 YLR010C TEN1 Protein required for cell viability M[17] RVACCCTD Known: Aft1 down 1 41 YDR212W TCP1 chaperonin subunit alpha M[17] RVACCCTD Known: Aft1 down 1 41 YER025W GCD11 gamma subunit of translational initiation factor eIF-2 M[17] RVACCCTD Known: Aft1 down 1 41 YER026C CHO1 phosphatidylserine synthase M[17] RVACCCTD Known: Aft1 down 1 41 YOR112W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 41 YKL068W NUP100 Nuclear pore complex protein homologous to Nup116p M[17] RVACCCTD Known: Aft1 down 1 40 YOR361C PRT1 translation initiation factor eIF3 subunit M[17] RVACCCTD Known: Aft1 down 1 40 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[17] RVACCCTD Known: Aft1 down 1 40 YDR208W MSS4 Phosphatidylinositol 4-phosphate kinase M[17] RVACCCTD Known: Aft1 down 1 40 YER110C KAP123 Karyopherin beta 4 M[17] RVACCCTD Known: Aft1 down 1 40 YHR049W FSH1 M[17] RVACCCTD Known: Aft1 down 1 40 YKR053C YSR3 DHS-1-P phosphatase M[17] RVACCCTD Known: Aft1 down 1 40 YPL190C NAB3 nuclear polyadenylated RNA/single strand DNA-binding protein M[17] RVACCCTD Known: Aft1 down 1 40 YJL170C ASG7 An a-specific gene that is induced to a higher expression level by alpha factor M[17] RVACCCTD Known: Aft1 down 1 40 YPL140C MKK2 protein kinase M[17] RVACCCTD Known: Aft1 down 1 40 YMR183C SSO2 post-Golgi t-SNARE M[17] RVACCCTD Known: Aft1 down 1 40 YLL029W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 40 YBR067C TIP1 cell wall mannoprotein M[17] RVACCCTD Known: Aft1 down 1 40 YML053C Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 40 YER119C Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 40 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[17] RVACCCTD Known: Aft1 down 1 40 YHR096C HXT5 hexose transporter M[17] RVACCCTD Known: Aft1 down 1 40 YEL046C GLY1 Threonine Aldolase M[17] RVACCCTD Known: Aft1 down 1 40 YIL083C Protein required for cell viability M[17] RVACCCTD Known: Aft1 down 1 40 YNR033W ABZ1 para-aminobenzoate synthase, PABA synthase M[17] RVACCCTD Known: Aft1 down 1 40 YAL062W GDH3 NADP-linked glutamate dehydrogenase M[17] RVACCCTD Known: Aft1 down 1 40 YER114C BOI2 involved in bud formation, has SH3 domain M[17] RVACCCTD Known: Aft1 down 1 40 YPL248C GAL4 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[17] RVACCCTD Known: Aft1 down 1 40 YCL028W RNQ1 transferable epigenetic modifier M[17] RVACCCTD Known: Aft1 down 1 40 YPL231W FAS2 alpha subunit of fatty acid synthase M[17] RVACCCTD Known: Aft1 down 1 39 YPR023C EAF3 stable component of the NuA4 complex M[17] RVACCCTD Known: Aft1 down 1 39 YKR027W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 39 YKL104C GFA1 Glutamine_fructose-6-phosphate amidotransferase (glucoseamine-6-phosphate synthase) M[17] RVACCCTD Known: Aft1 down 1 39 YNL079C TPM1 tropomyosin I M[17] RVACCCTD Known: Aft1 down 1 39 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[17] RVACCCTD Known: Aft1 down 1 39 YBR278W DPB3 C and C' subunits of DNA polymerase II M[17] RVACCCTD Known: Aft1 down 1 39 YMR104C YPK2 protein kinase M[17] RVACCCTD Known: Aft1 down 1 39 YGR239C PEX21 Peroxin Pex21p M[17] RVACCCTD Known: Aft1 down 1 39 YJL130C URA2 carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase M[17] RVACCCTD Known: Aft1 down 1 39 YNL024C Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 39 YHL031C GOS1 Golgi SNARE protein M[17] RVACCCTD Known: Aft1 down 1 39 YDL085W NDE2 Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 39 YDL220C CDC13 binds to single-stranded TG1-3 telomere G-tails M[17] RVACCCTD Known: Aft1 down 1 39 YPR116W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 38 YGR096W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 38 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[17] RVACCCTD Known: Aft1 down 1 38 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[17] RVACCCTD Known: Aft1 down 1 38 YHL020C OPI1 negative regulator of phospholipid biosynthesis M[17] RVACCCTD Known: Aft1 down 1 38 YGR059W SPR3 septin protein involved in sporulation M[17] RVACCCTD Known: Aft1 down 1 37 YPL022W RAD1 UV endonuclease M[17] RVACCCTD Known: Aft1 down 1 37 YJL183W MNN11 mannosyltransferase complex component M[17] RVACCCTD Known: Aft1 down 1 37 YOR371C KRH2 Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 37 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[17] RVACCCTD Known: Aft1 down 1 37 YMR083W ADH3 alcohol dehydrogenase isoenzyme III M[17] RVACCCTD Known: Aft1 down 1 36 YBL021C HAP3 transcriptional activator protein of CYC1 M[17] RVACCCTD Known: Aft1 down 1 36 YBR239C Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 36 YMR321C Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 36 YBR060C ORC2 origin recognition complex subunit 2 M[17] RVACCCTD Known: Aft1 down 1 36 YBR071W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 35 YLR410W VIP1 Homologous to S. pombe asp1+ M[17] RVACCCTD Known: Aft1 down 1 34 YEL031W SPF1 P-type ATPase M[17] RVACCCTD Known: Aft1 down 1 34 YKL121W Hypothetical ORF M[17] RVACCCTD Known: Aft1 down 1 31 YCR023C Hypothetical ORF M[17] M[18] WCGCGTCGCGt Novel: double Mbp1 down 2 87 YDR059C UBC5 ubiquitin-conjugating enzyme M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 70 YNL103W MET4 member of the leucine zipper family of transcriptional activators M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 70 YPR134W MSS18 Involved in splicing of mitochondrial COX1 transcript M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 69 YCR063W BUD31 M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 69 YMR178W Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 69 YOL020W TAT2 Tryptophan permease, high affinity M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 67 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 66 YEL046C GLY1 Threonine Aldolase M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 66 YDL100C ARR4 resistance to arsenicals M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 55 YIL024C Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 55 YJR031C GEA1 GDP/GTP exchange factor M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 54 YBL034C STU1 component of the mitotic spindle M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 54 YLR314C CDC3 Septin; component of 10 nm filaments of mother-bud neck M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 48 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 48 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 48 YPL268W PLC1 phosphoinositide-specific phospholipase C M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 48 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 46 YNR027W BUD17 M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 46 YNL073W MSK1 mitochondrial lysine-tRNA synthetase M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 45 YKL043W PHD1 putative transcription factor M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 45 YNL230C ELA1 elongin A M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 42 YPL191C Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 40 YPR182W SMX3 Sm or Sm-like snRNP protein M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 40 YDL004W ATP16 ATP synthase delta subunit M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 39 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 38 YLR356W Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 38 YBR196C PGI1 Glucose-6-phosphate isomerase M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 38 YBR097W VPS15 Myristoylated Serine/threonine protein kinase involved in vacuolar protein sorting M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 37 YKL045W PRI2 p58 polypeptide of DNA primase M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 36 YOL101C Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 35 YMR099C Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 35 YIL146C ECM37 (putative) involved in cell wall biogenesis M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 35 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 35 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 35 YMR084W Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 35 YKL048C ELM1 protein kinase M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 34 YPL063W Protein required for cell viability M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 33 YIL132C CSM2 Protein required for meiotic chromosome segregation M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 32 YNL278W CAF120 CCR4 Associated Factor 120 kDa M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 32 YPL150W Hypothetical ORF M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 32 YJL096W MRPL49 mitochondrial ribosomal protein of the large subunit M[18] WCGCGTCGCGt Novel: double Mbp1 down 1 31 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[18] M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 55 YNL104C LEU4 alpha-isopropylmalate synthase (2-Isopropylmalate Synthase) M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 55 YPL045W VPS16 Vacuolar sorting protein M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 54 YDR530C APA2 5',5'''-P-1,P-4-tetraphosphate phosphorylase II M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 54 YFL008W SMC1 SMC chromosomal ATPase family member M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 54 YNL204C SPS18 Transcription factor M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 53 YMR160W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 53 YER085C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 53 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 51 YLR268W SEC22 Synaptobrevin (v-SNARE) homolog M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 51 YDL214C PRR2 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 48 YPR093C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 47 YKL024C URA6 uridine-monophosphate kinase (uridylate kinase) M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 45 YDR275W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 45 YDR276C PMP3 hypothetical transmembrane protein M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 44 YFR051C RET2 vesicle coat component M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 44 YJL144W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YPR078C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YDR213W UPC2 zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YBR252W DUT1 dUTP pyrophosphatase (dUTPase) M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YGR093W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YLR429W CRN1 has homology to the Dictyostelium and human actin-binding protein coronin M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YDL208W NHP2 HMG-like nuclear protein M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 41 YDR072C IPT1 inositolphosphotransferase 1 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 40 YNL024C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 40 YJR091C JSN1 Benomyl dependent tubulin mutant M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 40 YGL157W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 40 YNL300W TOS6 Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 38 YPL154C PEP4 vacuolar proteinase A M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 38 YCR093W CDC39 nuclear protein that negatively regulates basal transcription M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 38 YGR144W THI4 component of the biosynthetic pathway producing the thiazole precursor of thiamine M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YDL085W NDE2 Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YJL099W CHS6 involved in chitin biosynthesis M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YDR160W SSY1 regulator of transporters M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YBR066C NRG2 homologue of NRG1 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YPL181W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YGR268C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YMR283C RIT1 Initiator methionine tRNA 2'-O-ribosyl phosphate transferase M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YNL079C TPM1 tropomyosin I M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YKL034W TUL1 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YHR085W Protein required for cell viability M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YCL055W KAR4 transcription factor involved in karyogamy M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YER065C ICL1 isocitrate lyase M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 37 YIL104C SHQ1 Essential protein involved in snoRNA accumulation. M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 36 YLR425W TUS1 1307 AA, hydrophilic protein. M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 36 YMR251W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 36 YLL018C-A COX19 Cox19p (under characterization) M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 34 YDL139C SCM3 Suppressor of chromosome missegregation M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 34 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 34 YPR054W SMK1 MAP kinase M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 34 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 34 YOR152C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 34 YBL033C RIB1 GTP cyclohydrolase II M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YEL001C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YDL057W Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YBR162W-A YSY6 involved in the secretory pathway M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YNL108C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YBR160W CDC28 M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YLR024C UBR2 ubiquitin-protein ligase (E3) M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YLR409C Protein required for cell viability M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YGR198W Protein required for cell viability M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YGR059W SPR3 septin protein involved in sporulation M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 33 YDR051C Hypothetical ORF M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 32 YMR183C SSO2 post-Golgi t-SNARE M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 32 YDL234C GYP7 GTPase-activating protein M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 30 YNL161W CBK1 Protein kinase M[19] GGGT.ACCC Novel: Reb1 palindrome down 1 30 YPL048W CAM1 Calcium and phospholipid binding protein homologous to translation elongation factor 1-gamma (EF-1gamma) M[19] M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 68 YLR045C STU2 spindle pole body component M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 64 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 63 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 62 YLR287C Hypothetical ORF M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 62 YHR121W Hypothetical ORF M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 61 YGR284C ERV29 ER-Golgi transport vesicle protein M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 61 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 60 YBL021C HAP3 transcriptional activator protein of CYC1 M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 57 YBR197C Hypothetical ORF M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 57 YLR453C RIF2 Nuclear protein M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 56 YLR004C Hypothetical ORF M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 55 YGL146C Hypothetical ORF M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 54 YPR162C ORC4 56-kDa subunit of origin recognition complex (ORC) M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 50 YNL310C Protein required for cell viability M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 41 YKL151C Hypothetical ORF M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 36 YPL037C EGD1 regulator of pol II transcribed genes M[20] G..ATGTGTGGGTGT Known: RAP1 down 1 36 YPL038W MET31 zinc finger DNA binding factor, transcriptional regulator of sulfur amino acid metabolism, highly homologous to Met32p M[20] M[21] TTTTGTGTCRC Known: MSE down 3 154 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[21] TTTTGTGTCRC Known: MSE down 2 112 YFR022W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 2 109 YDL027C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 2 95 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[21] TTTTGTGTCRC Known: MSE down 2 88 YBR071W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 2 85 YBR046C ZTA1 Homolog to quinone oxidoreductase (E. coli) M[21] TTTTGTGTCRC Known: MSE down 2 84 YLR307W CDA1 Chitin Deacetylase M[21] TTTTGTGTCRC Known: MSE down 2 73 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[21] TTTTGTGTCRC Known: MSE down 2 73 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[21] TTTTGTGTCRC Known: MSE down 1 71 YHR183W GND1 Phosphogluconate Dehydrogenase (Decarboxylating) M[21] TTTTGTGTCRC Known: MSE down 1 68 YOR340C RPA43 DNA-dependent RNA polymerase I subunit A43 M[21] TTTTGTGTCRC Known: MSE down 1 67 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[21] TTTTGTGTCRC Known: MSE down 1 61 YNL129W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 59 YDR282C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 56 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[21] TTTTGTGTCRC Known: MSE down 1 56 YKL096W-A CWP2 cell wall mannoprotein M[21] TTTTGTGTCRC Known: MSE down 1 56 YMR253C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 56 YBR196C PGI1 Glucose-6-phosphate isomerase M[21] TTTTGTGTCRC Known: MSE down 1 55 YOL133W HRT1 subunit of Skp1-Cullin-F-box ubiquitin protein ligase (SCF) M[21] TTTTGTGTCRC Known: MSE down 1 55 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[21] TTTTGTGTCRC Known: MSE down 1 54 YCR046C IMG1 mitochondrial ribosomal protein M[21] TTTTGTGTCRC Known: MSE down 1 53 YEL024W RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M[21] TTTTGTGTCRC Known: MSE down 1 53 YEL023C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 53 YOL092W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 52 YJR030C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 51 YNL070W TOM7 translocase of the outer mito. membrane M[21] TTTTGTGTCRC Known: MSE down 1 51 YNL069C RPL16B Ribosomal protein L16B (L21B) (rp23) (YL15) M[21] TTTTGTGTCRC Known: MSE down 1 51 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[21] TTTTGTGTCRC Known: MSE down 1 51 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[21] TTTTGTGTCRC Known: MSE down 1 51 YNL197C WHI3 Putative RNA binding protein M[21] TTTTGTGTCRC Known: MSE down 1 50 YIL105C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 50 YIL106W MOB1 (putative) transcriptional regulator involved in mitosis M[21] TTTTGTGTCRC Known: MSE down 1 47 YLR340W RPP0 60S ribosomal protein P0 (A0) (L10E) M[21] TTTTGTGTCRC Known: MSE down 1 47 YDL007W RPT2 (putative) 26S protease subunit M[21] TTTTGTGTCRC Known: MSE down 1 47 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[21] TTTTGTGTCRC Known: MSE down 1 45 YNL195C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 44 YKL133C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 44 YDL144C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 44 YNR033W ABZ1 para-aminobenzoate synthase, PABA synthase M[21] TTTTGTGTCRC Known: MSE down 1 44 YCR063W BUD31 M[21] TTTTGTGTCRC Known: MSE down 1 44 YBR284W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 43 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[21] TTTTGTGTCRC Known: MSE down 1 43 YEL036C ANP1 subunit of mannosyltransferase complex M[21] TTTTGTGTCRC Known: MSE down 1 43 YGR274C TAF1 TFIID 145 KDa subunit M[21] TTTTGTGTCRC Known: MSE down 1 43 YKL205W LOS1 nuclear protein LOS1 M[21] TTTTGTGTCRC Known: MSE down 1 43 YNL055C POR1 Outer mitochondrial membrane porin (voltage-dependent anion channel, or VDAC) M[21] TTTTGTGTCRC Known: MSE down 1 43 YNL056W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 43 YJR106W ECM27 (putative) involved in cell wall biogenesis M[21] TTTTGTGTCRC Known: MSE down 1 43 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[21] TTTTGTGTCRC Known: MSE down 1 43 YBR201W DER1 involved in degradation in the ER M[21] TTTTGTGTCRC Known: MSE down 1 42 YBR070C Protein required for cell viability M[21] TTTTGTGTCRC Known: MSE down 1 42 YGL186C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 42 YNL200C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 42 YMR231W PEP5 peripheral vaculor membrane protein; putative Zn-finger protein M[21] TTTTGTGTCRC Known: MSE down 1 42 YGR059W SPR3 septin protein involved in sporulation M[21] TTTTGTGTCRC Known: MSE down 1 42 YDL125C HNT1 similarity to protein kinase C inhibitor-I M[21] TTTTGTGTCRC Known: MSE down 1 42 YDL214C PRR2 M[21] TTTTGTGTCRC Known: MSE down 1 42 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[21] TTTTGTGTCRC Known: MSE down 1 42 YGL121C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 42 YPL176C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 41 YKL099C UTP11 Protein required for cell viability M[21] TTTTGTGTCRC Known: MSE down 1 41 YFL041W FET5 multicopper oxidase, type 1 integral membrane protein M[21] TTTTGTGTCRC Known: MSE down 1 41 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[21] TTTTGTGTCRC Known: MSE down 1 41 YBR018C GAL7 galactose-1-phosphate uridyl transferase M[21] TTTTGTGTCRC Known: MSE down 1 41 YHR170W NMD3 cytoplasmic factor required for a late cytoplasmic assembly step of the 60S subunit M[21] TTTTGTGTCRC Known: MSE down 1 41 YOR189W IES4 Ino Eighty Subunit 4 M[21] TTTTGTGTCRC Known: MSE down 1 41 YNL091W NST1 Negative affector of Salt tolerance M[21] TTTTGTGTCRC Known: MSE down 1 41 YBR038W CHS2 chitin synthase 2 M[21] TTTTGTGTCRC Known: MSE down 1 41 YKL176C LST4 involved in regulated secretion/recycling of nitrogen regulated permeases M[21] TTTTGTGTCRC Known: MSE down 1 41 YIL016W SNL1 18.3 kD integral membrane protein M[21] TTTTGTGTCRC Known: MSE down 1 41 YER089C PTC2 Protein phosphatase type 2C M[21] TTTTGTGTCRC Known: MSE down 1 41 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[21] TTTTGTGTCRC Known: MSE down 1 41 YGL181W GTS1 Glycine-threonine-serine repeat protein M[21] TTTTGTGTCRC Known: MSE down 1 41 YKL163W PIR3 Protein containing tandem internal repeats M[21] TTTTGTGTCRC Known: MSE down 1 41 YKL162C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 40 YMR205C PFK2 phosphofructokinase beta subunit M[21] TTTTGTGTCRC Known: MSE down 1 40 YLR363W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[21] TTTTGTGTCRC Known: MSE down 1 40 YGL008C PMA1 plasma membrane H+-ATPase M[21] TTTTGTGTCRC Known: MSE down 1 40 YOR215C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 40 YAL022C FUN26 predicted membrane protein M[21] TTTTGTGTCRC Known: MSE down 1 40 YGL187C COX4 subunit IV of cytochrome c oxidase M[21] TTTTGTGTCRC Known: MSE down 1 40 YIL142W CCT2 molecular chaperone M[21] TTTTGTGTCRC Known: MSE down 1 40 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[21] TTTTGTGTCRC Known: MSE down 1 39 YKR058W GLG1 glycogen synthesis initiator M[21] TTTTGTGTCRC Known: MSE down 1 39 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[21] TTTTGTGTCRC Known: MSE down 1 39 YDL197C ASF2 Anti-silencing protein, involved in transcription M[21] TTTTGTGTCRC Known: MSE down 1 38 YER116C SLX8 M[21] TTTTGTGTCRC Known: MSE down 1 38 YJL194W CDC6 pre-initiation complex component M[21] TTTTGTGTCRC Known: MSE down 1 38 YDR101C ARX1 M[21] TTTTGTGTCRC Known: MSE down 1 38 YDR100W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 38 YOL131W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 38 YPL127C HHO1 histone H1 M[21] TTTTGTGTCRC Known: MSE down 1 38 YBR026C MRF1' Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence M[21] TTTTGTGTCRC Known: MSE down 1 38 YMR008C PLB1 Phospholipase B (lypophospholipase) M[21] TTTTGTGTCRC Known: MSE down 1 37 YBR222C FAT2 Probable AMP-binding protein M[21] TTTTGTGTCRC Known: MSE down 1 37 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[21] TTTTGTGTCRC Known: MSE down 1 37 YER128W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 37 YGL229C SAP4 Sit4 protein phosphatase-associated protein M[21] TTTTGTGTCRC Known: MSE down 1 37 YCR057C PWP2 regulatory protein M[21] TTTTGTGTCRC Known: MSE down 1 37 YGR058W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 37 YOR065W CYT1 Cytochrome c1 M[21] TTTTGTGTCRC Known: MSE down 1 37 YKL039W PTM1 Putative membrane protein M[21] TTTTGTGTCRC Known: MSE down 1 36 YOR337W TEA1 Ty1 enhancer activator M[21] TTTTGTGTCRC Known: MSE down 1 36 YDR033W MRH1 Membrane protein Related to Hsp30p; Localized by immunofluorescence to cell membranes, primarily the plasma membrane. A punctuate immunofluorescence pattern was observed within cell buds. The nuclear envelope, but not the vacuole or mitochondrial membranes, are also immunostained. M[21] TTTTGTGTCRC Known: MSE down 1 36 YDR034C LYS14 transcription factor involved in lysine biosynthesis M[21] TTTTGTGTCRC Known: MSE down 1 36 YPL125W KAP120 karyopherin M[21] TTTTGTGTCRC Known: MSE down 1 36 YBR147W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 36 YMR104C YPK2 protein kinase M[21] TTTTGTGTCRC Known: MSE down 1 35 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[21] TTTTGTGTCRC Known: MSE down 1 35 YOR014W RTS1 B-type regulatory subunit of protein phosphatase 2A (PP2A) M[21] TTTTGTGTCRC Known: MSE down 1 35 YOR016C ERP4 p24 protein involved in membrane trafficking M[21] TTTTGTGTCRC Known: MSE down 1 35 YJL157C FAR1 Cdc28p kinase inhibitor M[21] TTTTGTGTCRC Known: MSE down 1 35 YGR134W CAF130 CCR4 Associated Factor 130 kDa M[21] TTTTGTGTCRC Known: MSE down 1 35 YBR128C APG14 involved in autophagy M[21] TTTTGTGTCRC Known: MSE down 1 34 YOR185C GSP2 GTP binding protein, almost identical to Gsp1p M[21] TTTTGTGTCRC Known: MSE down 1 34 YOR184W SER1 phosphoserine transaminase M[21] TTTTGTGTCRC Known: MSE down 1 34 YKR059W TIF1 translation initiation factor eIF4A M[21] TTTTGTGTCRC Known: MSE down 1 34 YLR219W MSC3 M[21] TTTTGTGTCRC Known: MSE down 1 34 YJR006W HYS2 DNA polymerase delta 55 KD subunit M[21] TTTTGTGTCRC Known: MSE down 1 33 YBR112C CYC8 Transcription regulatory protein M[21] TTTTGTGTCRC Known: MSE down 1 33 YPR183W DPM1 dolichol phosphate mannose synthase M[21] TTTTGTGTCRC Known: MSE down 1 32 YDL156W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 32 YER048W-A Similar to D. melanogaster protein; weaker homology to C. elegans protein with similarity to human cdk7/cyclin H assembly factor M[21] TTTTGTGTCRC Known: MSE down 1 32 YMR010W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 31 YDR524C AGE1 ARF GAP with effector function(s) M[21] TTTTGTGTCRC Known: MSE down 1 31 YLL034C Protein required for cell viability M[21] TTTTGTGTCRC Known: MSE down 1 31 YLL035W GRC3 Product of gene unknown M[21] TTTTGTGTCRC Known: MSE down 1 30 YOR355W GDS1 involved in nuclear control of mitochondria M[21] TTTTGTGTCRC Known: MSE down 1 30 YJL129C TRK1 180 kDa high affinity potassium transporter M[21] TTTTGTGTCRC Known: MSE down 1 30 YGL117W Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 30 YMR204C Hypothetical ORF M[21] TTTTGTGTCRC Known: MSE down 1 30 YMR203W TOM40 Mitochondrial outer membrane protein; forms the outer membrane import channel M[21] M[22] TTTCA.CGCGC Novel: No cat down 2 106 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[22] TTTCA.CGCGC Novel: No cat down 2 78 YOR288C MPD1 Disulfide isomerase related protein M[22] TTTCA.CGCGC Novel: No cat down 1 64 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[22] TTTCA.CGCGC Novel: No cat down 1 54 YPR055W SEC8 121 kDa component of the Exocyst complex, which is required for exocytosis, and which also contains the gene products encoded by SEC3, SEC5, SEC6, SEC10, SEC15, and EXO70 M[22] TTTCA.CGCGC Novel: No cat down 1 54 YMR009W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 53 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[22] TTTCA.CGCGC Novel: No cat down 1 53 YGR093W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 53 YGR049W SCM4 suppressor of cdc4 mutations M[22] TTTCA.CGCGC Novel: No cat down 1 53 YOL026C Protein required for cell viability M[22] TTTCA.CGCGC Novel: No cat down 1 51 YER111C SWI4 transcription factor M[22] TTTCA.CGCGC Novel: No cat down 1 51 YLR190W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 50 YCR051W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 49 YCL049C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 49 YBR062C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 48 YER176W ECM32 DNA Helicase I M[22] TTTCA.CGCGC Novel: No cat down 1 48 YPL140C MKK2 protein kinase M[22] TTTCA.CGCGC Novel: No cat down 1 48 YGR012W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 47 YER065C ICL1 isocitrate lyase M[22] TTTCA.CGCGC Novel: No cat down 1 47 YPL150W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 45 YPR040W SDF1 Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 45 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[22] TTTCA.CGCGC Novel: No cat down 1 44 YDR188W CCT6 component of cytoplasmic chaperonin complex M[22] TTTCA.CGCGC Novel: No cat down 1 43 YOR310C NOP58 57 kDa nucleolar protein M[22] TTTCA.CGCGC Novel: No cat down 1 43 YJL163C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 43 YDL103C QRI1 UDP-N-acetylglucosamine pyrophosphorylase M[22] TTTCA.CGCGC Novel: No cat down 1 43 YKL099C UTP11 Protein required for cell viability M[22] TTTCA.CGCGC Novel: No cat down 1 41 YBR141C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 41 YNL092W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 41 YGL156W AMS1 vacuolar alpha mannosidase M[22] TTTCA.CGCGC Novel: No cat down 1 41 YPL030W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 41 YJR044C VPS55 YJR044c M[22] TTTCA.CGCGC Novel: No cat down 1 41 YDR498C SEC20 membrane glycoprotein, sorted by HDEL retrieval system M[22] TTTCA.CGCGC Novel: No cat down 1 41 YNR023W SNF12 73 kDa subunit of the SWI/SNF transcription activation complex, homolog of Rsc6p subunit of the RSC chromatin remodeling complex M[22] TTTCA.CGCGC Novel: No cat down 1 41 YKL079W SMY1 kinesin heavy chain homolog M[22] TTTCA.CGCGC Novel: No cat down 1 41 YOR285W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 40 YNL166C BNI5 bud neck protein M[22] TTTCA.CGCGC Novel: No cat down 1 40 YDL079C MRK1 MDS1 related protein kinase M[22] TTTCA.CGCGC Novel: No cat down 1 40 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[22] TTTCA.CGCGC Novel: No cat down 1 40 YMR132C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 40 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[22] TTTCA.CGCGC Novel: No cat down 1 40 YER048C CAJ1 homologous to E. coli DnaJ M[22] TTTCA.CGCGC Novel: No cat down 1 40 YER158C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 40 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[22] TTTCA.CGCGC Novel: No cat down 1 40 YDL193W Protein required for cell viability M[22] TTTCA.CGCGC Novel: No cat down 1 40 YMR214W SCJ1 dnaJ homolog M[22] TTTCA.CGCGC Novel: No cat down 1 40 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[22] TTTCA.CGCGC Novel: No cat down 1 40 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[22] TTTCA.CGCGC Novel: No cat down 1 40 YGR017W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 40 YNL197C WHI3 Putative RNA binding protein M[22] TTTCA.CGCGC Novel: No cat down 1 39 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[22] TTTCA.CGCGC Novel: No cat down 1 39 YER156C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 39 YPL036W PMA2 plasma membrane ATPase M[22] TTTCA.CGCGC Novel: No cat down 1 39 YGR013W SNU71 U1 snRNP protein M[22] TTTCA.CGCGC Novel: No cat down 1 39 YER008C SEC3 SEC3 encodes the 144 kD and 91 kD components of the Exocyst complex; the 91 kD component is a C-terminal proteolytic breakdown product of full length Sec3p M[22] TTTCA.CGCGC Novel: No cat down 1 39 YAL022C FUN26 predicted membrane protein M[22] TTTCA.CGCGC Novel: No cat down 1 38 YLR035C MLH2 MutL Homolog M[22] TTTCA.CGCGC Novel: No cat down 1 38 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[22] TTTCA.CGCGC Novel: No cat down 1 38 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[22] TTTCA.CGCGC Novel: No cat down 1 38 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[22] TTTCA.CGCGC Novel: No cat down 1 38 YJR073C OPI3 Methylene-fatty-acyl-phospholipid synthase (unsaturated phospholipid N-methyltransferase) M[22] TTTCA.CGCGC Novel: No cat down 1 38 YHR105W Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 37 YKL186C MTR2 mRNA transport regulator M[22] TTTCA.CGCGC Novel: No cat down 1 37 YML125C Protein required for cell viability M[22] TTTCA.CGCGC Novel: No cat down 1 37 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[22] TTTCA.CGCGC Novel: No cat down 1 35 YHR165C PRP8 U5 snRNP and spliceosome component M[22] TTTCA.CGCGC Novel: No cat down 1 35 YIL146C ECM37 (putative) involved in cell wall biogenesis M[22] TTTCA.CGCGC Novel: No cat down 1 33 YJR119C Hypothetical ORF M[22] TTTCA.CGCGC Novel: No cat down 1 33 YNL279W PRM1 pheromone-regulated membrane protein M[22] M[23] TATTAWTATTATtMt.atta Known: TBP down 2 124 YHL020C OPI1 negative regulator of phospholipid biosynthesis M[23] TATTAWTATTATtMt.atta Known: TBP down 2 115 YNL197C WHI3 Putative RNA binding protein M[23] TATTAWTATTATtMt.atta Known: TBP down 2 111 YPR119W CLB2 G(sub)2-specific B-type cyclin M[23] TATTAWTATTATtMt.atta Known: TBP down 2 111 YPR120C CLB5 B-type cyclin M[23] TATTAWTATTATtMt.atta Known: TBP down 2 99 YBL030C PET9 mitochondrial ADP/ATP translocator M[23] TATTAWTATTATtMt.atta Known: TBP down 2 99 YBL031W SHE1 Product of gene unknown M[23] TATTAWTATTATtMt.atta Known: TBP down 2 91 YMR139W RIM11 Serine/threonine protein kinase, phosphorylates the mitotic activator IME1 M[23] TATTAWTATTATtMt.atta Known: TBP down 2 85 YHR157W REC104 mRNA is induced early in meiosis M[23] TATTAWTATTATtMt.atta Known: TBP down 2 85 YHR158C KEL1 involved in cell fusion and morphology; contains six Kelch repeats M[23] TATTAWTATTATtMt.atta Known: TBP down 2 85 YGR059W SPR3 septin protein involved in sporulation M[23] TATTAWTATTATtMt.atta Known: TBP down 2 83 YNL307C MCK1 43.1 kDa Serine/threonine/tyrosine protein kinase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 82 YPR181C SEC23 cytoplasmic GTPase-activating protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 82 YPR180W AOS1 Similar to ubiquitin activating proteins M[23] TATTAWTATTATtMt.atta Known: TBP down 2 79 YDL139C SCM3 Suppressor of chromosome missegregation M[23] TATTAWTATTATtMt.atta Known: TBP down 2 78 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[23] TATTAWTATTATtMt.atta Known: TBP down 2 77 YGL078C DBP3 ATP-dependent RNA helicase CA3 of the DEAD/DEAH box family M[23] TATTAWTATTATtMt.atta Known: TBP down 2 77 YGL079W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 72 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[23] TATTAWTATTATtMt.atta Known: TBP down 2 70 YPL250C ICY2 interacting with the cytoskeleton M[23] TATTAWTATTATtMt.atta Known: TBP down 1 70 YPR151C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 70 YPR149W NCE102 Involved in secretion of proteins that lack classical secretory signal sequences M[23] TATTAWTATTATtMt.atta Known: TBP down 1 65 YMR202W ERG2 C-8 sterol isomerase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 64 YGL187C COX4 subunit IV of cytochrome c oxidase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 63 YEL037C RAD23 ubiquitin-like protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 63 YEL038W UTR4 Product of gene unknown M[23] TATTAWTATTATtMt.atta Known: TBP down 1 62 YIL021W RPB3 45 kDa subunit of RNA polymerase II M[23] TATTAWTATTATtMt.atta Known: TBP down 1 62 YIL020C HIS6 phosphoribosyl-5-amino-1-phosphoribosyl-4-imidazolecarboxiamide isomerase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 59 YDR403W DIT1 first enzyme in dityrosine synthesis in the outer layer of the spore wall pathway converting L-tyrosine to N-formyl-L-tyrosine, expressed late (10-16 hr) in sporulation M[23] TATTAWTATTATtMt.atta Known: TBP down 1 59 YDR404C RPB7 dissociable subunit of RNA polymerase II M[23] TATTAWTATTATtMt.atta Known: TBP down 1 59 YJL098W SAP185 Sit4p-associated protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 58 YDR374C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 58 YDR373W FRQ1 Product of gene unknown M[23] TATTAWTATTATtMt.atta Known: TBP down 1 58 YDR436W PPZ2 serine-threonine phosphatase Z M[23] TATTAWTATTATtMt.atta Known: TBP down 1 57 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 56 YDL193W Protein required for cell viability M[23] TATTAWTATTATtMt.atta Known: TBP down 1 55 YOL040C RPS15 40S ribosomal protein S15 (S21) (rp52) (RIG protein) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 55 YNR038W DBP6 putative RNA helicase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 55 YNR039C ZRG17 zinc-regulated gene M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YGL036W Mtf1 Two Hybrid Clone 2 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YGL035C MIG1 C2H2 zinc finger protein which resembles the mammalian Egr and Wilms tumour proteins M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YLR260W LCB5 sphingoid long chain base (LCB) kinase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YLR262C YPT6 highly homologous to the human GTPase, Rab6 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YCR035C RRP43 Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p). M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YCR034W FEN1 Probable subunit of 1,3-beta-glucan synthase; homolog of ELO1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YML048W GSF2 involved in glucose repression M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YML047C PRM6 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 54 YML091C RPM2 subunit of mitochondrial RNase P M[23] TATTAWTATTATtMt.atta Known: TBP down 1 53 YNL275W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 53 YNL274C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 53 YGL191W COX13 subunit VIa of cytochrome c oxidase, may specifically interact with ATP M[23] TATTAWTATTATtMt.atta Known: TBP down 1 53 YGL190C CDC55 Protein phosphatase 2A regulatory subunit B M[23] TATTAWTATTATtMt.atta Known: TBP down 1 52 YOR315W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 52 YOR316C COT1 involved in cobalt accumulation M[23] TATTAWTATTATtMt.atta Known: TBP down 1 51 YLL019C KNS1 protein kinase homolog M[23] TATTAWTATTATtMt.atta Known: TBP down 1 51 YLL021W SPA2 spindle pole antigen M[23] TATTAWTATTATtMt.atta Known: TBP down 1 51 YPL267W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 51 YKL145W RPT1 putative ATPase, 26S protease subunit component M[23] TATTAWTATTATtMt.atta Known: TBP down 1 51 YKL144C RPC25 Subunit of RNA polymerase III M[23] TATTAWTATTATtMt.atta Known: TBP down 1 51 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[23] TATTAWTATTATtMt.atta Known: TBP down 1 50 YKL029C MAE1 mitochondrial malic enzyme M[23] TATTAWTATTATtMt.atta Known: TBP down 1 50 YGL238W CSE1 (putative) kinetochore protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 50 YGL237C HAP2 transcriptional activator protein of CYC1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 50 YBL080C PET112 62-kDa protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 50 YBL081W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YPL127C HHO1 histone H1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YJR121W ATP2 F(1)F(0)-ATPase complex beta subunit, mitochondrial M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YNL304W YPT11 similar to Ypt1 and other Ras-like GTP-binding proteins M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YNL302C RPS19B Ribosomal protein S19B (rp55B) (S16aB) (YS16B) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YML110C COQ5 Putative mitochondrial C-methyltransferase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YML111W BUL2 (putative) ubiquitin-mediated protein degradation M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YLR005W SSL1 Component of RNA polymerase transcription factor TFIIH M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YLR006C SSK1 Two-component signal transducer that with Sln1p regulates osmosensing MAP kinase cascade(suppressor of sensor kinase) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YCR093W CDC39 nuclear protein that negatively regulates basal transcription M[23] TATTAWTATTATtMt.atta Known: TBP down 1 49 YMR148W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YOL087C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YPR046W MCM16 Involved in chromosome segregation M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YNL054W VAC7 Integral vacuolar membrane protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YLR295C ATP14 ATP synthase subunit h M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YDL176W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YDL175C AIR2 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YER024W YAT2 carnitine acetyltransferase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YPL026C SKS1 serine/threonine protein kinase homologous to Ran1p M[23] TATTAWTATTATtMt.atta Known: TBP down 1 48 YPL027W SMA1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 47 YJL047C RTT101 Regulator of Ty1 Transposition M[23] TATTAWTATTATtMt.atta Known: TBP down 1 47 YIL030C SSM4 integral nuclear membrane protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 47 YIL031W ULP2 Product of gene unknown M[23] TATTAWTATTATtMt.atta Known: TBP down 1 47 YHR183W GND1 Phosphogluconate Dehydrogenase (Decarboxylating) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 46 YPR008W HAA1 Homolog of Ace1 Activator M[23] TATTAWTATTATtMt.atta Known: TBP down 1 46 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 46 YPR006C ICL2 Isocitrate lyase, may be nonfunctional M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YDL144C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YDR073W SNF11 component of SWI/SNF global transcription activator complex M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YCL050C APA1 diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase I M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YCL051W LRE1 involved in laminarase resistance M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YKL084W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YKL082C Protein required for cell viability M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YBR158W CST13 Chromosome STability M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YER166W DNF1 Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YDR223W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 45 YDR224C HTB1 Histone H2B (HTB1 and HTB2 code for nearly identical proteins) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YGR206W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YGR207C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YMR198W CIK1 spindle pole body associated protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YML070W DAK1 putative dihydroxyacetone kinase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YLR074C BUD20 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YIR021W MRS1 mitochondrial RNA splicing M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YLR407W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YLR408C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 44 YER079W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YDR322W MRPL35 Mitochondrial ribosomal protein MRPL35 (YmL35) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YDR322C-A TIM11 subunit e of mitochondrial F1F0-ATPase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YPR188C MLC2 putative light chain for Myo1p M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YPR187W RPO26 subunit common to RNA polymerases I, II, and III M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YOL121C RPS19A 40S ribosomal protein S19A (S16aA) (rp55A) (YS16A) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YJR066W TOR1 phosphatidylinositol kinase homolog M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YJR067C YAE1 Essential protein of unknown function M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YIR004W DJP1 involved in peroxisome biogenesis M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YNR009W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 43 YJL042W MHP1 Putative microtubule-associated protein (MAP) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 42 YKL059C MPE1 Protein required for cell viability M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YOR037W CYC2 cytochrome c mitochondrial import factor M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YOR038C HIR2 putative repressor protein; contains nuclear targeting signal M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YDR118W APC4 subunit of the anaphase promoting complex (APC) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YPL093W NOG1 (putative) nucleolar G-protein; homologs identified in human and Trypanosoma brucei M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YPR052C NHP6A 11-kDa nonhistone chromosomal protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YPR051W MAK3 N-acetyltransferase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YHR046C INM1 Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YHR045W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 41 YPL255W BBP1 Involved in mitotic and meitoic cell cycle M[23] TATTAWTATTATtMt.atta Known: TBP down 1 40 YPL134C ODC1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 40 YPL135W ISU1 Iron-sulfur cluster nifU-like protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 40 YFL024C EPL1 Probable chromatin protein because of homology to Drosophila Enahncer of Polycomb M[23] TATTAWTATTATtMt.atta Known: TBP down 1 40 YPL091W GLR1 Glutathione oxidoreductase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 40 YPL090C RPS6A Ribosomal protein S6A (S10A) (rp9) (YS4) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YDR488C PAC11 similar to rat dynein intermediate chain M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YML007W YAP1 jun-like transcription factor M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YML006C GIS4 CAAX box containing protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YJR048W CYC1 iso-1-cytochrome c M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YJR049C UTR1 involved in ferric reductase activity M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YLR027C AAT2 aspartate aminotransferase, cytosolic M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YHR002W LEU5 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YHR003C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YER132C PMD1 negative regulator of early meiotic gene expression M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YER131W RPS26B Ribosomal protein S26B M[23] TATTAWTATTATtMt.atta Known: TBP down 1 39 YDR277C MTH1 Protein is 61% identical to Msn3p M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YLL004W ORC3 Third subunit of the origin recognition complex M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YGL115W SNF4 associates with Snf1p M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YML092C PRE8 proteasome component Y7 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YML093W UTP14 Protein required for cell viability M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YCR059C YIH1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YHR018C ARG4 argininosuccinate lyase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YHR017W YSC83 similar to S. douglasii YSD83 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YPR156C TPO3 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 38 YOR362C PRE10 proteasome component YC1 (protease yscE subunit 1) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YOR243C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YIL016W SNL1 18.3 kD integral membrane protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YPL158C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YGR161C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YIL112W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YOR233W KIN4 protein kinase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YOR234C RPL33B Ribosomal protein L33B (L37B) (rp47) (YL37) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YDL161W ENT1 Ent1p M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YDL160C DHH1 (putative) DEAD box RNA helicase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YNL294C RIM21 Regulator of IME2 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 37 YNL295W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YMR181C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YGR063C SPT4 Zn-finger protein, transcriptional regulator M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YGR214W RPS0A Ribosomal protein S0A M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YOL012C HTZ1 An evolutionarily conserved member of the histone H2A F/Z family of histone variants M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YNL084C END3 Required for endocytosis and organization of the cytoskeleton M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YNL085W MKT1 retroviral protease signature protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YPL221W BOP1 Bypass of PAM1 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 36 YKL192C ACP1 mitochondrial acyl carrier protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YKR009C FOX2 peroxisomal multifunctional beta-oxidation protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YKR008W RSC4 Member of RSC complex. M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YGL162W SUT1 hypoxic gene family involved in sterol transport M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YGL161C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YEL036C ANP1 subunit of mannosyltransferase complex M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YGL244W RTF1 Nuclear protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YOR341W RPA190 RNA polymerase I subunit 190 (alpha) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 35 YOR342C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YER015W FAA2 Acyl-CoA synthetase (fatty acid activator 2) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YNR053C NOG2 Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YOR167C RPS28A Ribosomal protein S28A (S33A) (YS27) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YHL019C APM2 Similiar to clathrin coat proteins M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YMR301C ATM1 mitochondrial ABC transporter protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YOL117W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YCR003W MRPL32 Mitochondrial ribosomal protein MRPL32 (YmL32) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 34 YCR004C YCP4 FMN-binding protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YPL109C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YBR188C NTC20 splicing factor M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YBR187W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YLR258W GSY2 Glycogen synthase (UDP-gluocse--starch glucosyltransferase) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YLR259C HSP60 mitochondrial chaperonin, homolog of E. coli groEL protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YAL017W FUN31 Serine/threonine kinase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YPL005W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 33 YPL004C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YJL145W SFH5 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YHR143W-A RPC10 subunit of RNA polymerase II M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YHR144C DCD1 dCMP deaminase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YJR070C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YDL079C MRK1 MDS1 related protein kinase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YKR051W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 32 YKR052C MRS4 mitochondrial carrier protein, highly homologous to Mrs3p M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YGR086C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YOR052C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YML126C ERG13 3-hydroxy-3-methylglutaryl coenzyme A synthase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YML127W RSC9 Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YDL048C STP4 involved in tRNA splicing M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YNL016W PUB1 poly(A)+ RNA-binding protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 31 YDR339C Protein required for cell viability M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YDL072C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YDL073W Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YBR268W MRPL37 Probable mitochondrial protein L37 M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YBR269C Hypothetical ORF M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YGL008C PMA1 plasma membrane H+-ATPase M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YIL008W URM1 ubiquitin-like protein M[23] TATTAWTATTATtMt.atta Known: TBP down 1 30 YIL007C Hypothetical ORF M[23] M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 3 103 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YBR028C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YHR084W STE12 Transcription factor M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YGL093W SPC105 component of spindle pole M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YJL129C TRK1 180 kDa high affinity potassium transporter M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YBL076C ILS1 cytoplasmic isoleucyl-tRNA synthetase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YLR357W RSC2 Member of RSC complex. M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YBR135W CKS1 subunit of the Cdc28 protein kinase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YBL033C RIB1 GTP cyclohydrolase II M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 38 YMR099C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YDR425W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YMR231W PEP5 peripheral vaculor membrane protein; putative Zn-finger protein M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YPR083W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YMR009W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YLR268W SEC22 Synaptobrevin (v-SNARE) homolog M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YOL110W SHR5 involved in RAS localization and palmitoylation M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YOL045W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YJR044C VPS55 YJR044c M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YHL010C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YJL118W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YMR010W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YJR054W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YPL155C KIP2 kinesin-related protein M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YBR199W KTR4 Putative alpha-1,2-mannosyltransferase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YBR117C TKL2 transketolase, homologous to tkl1 M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YER166W DNF1 Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YDR059C UBC5 ubiquitin-conjugating enzyme M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YML058W-A HUG1 induced by DNA damage and replication arrest M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YGR055W MUP1 high affinity methionine permease M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YGR201C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YBR052C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YJL151C SNA3 Small integral membrane protein M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YBL021C HAP3 transcriptional activator protein of CYC1 M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YDR361C BCP1 Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 37 YCL016C DCC1 M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 36 YGL037C PNC1 pyrazinamidase and nicotinamidase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 36 YOR054C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 36 YKL098W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 36 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 36 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 35 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 35 YPL222W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 34 YBR126C TPS1 56 kD synthase subunit of trehalose-6-phosphate synthase/phosphatase complex M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 33 YGL081W Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 33 YDR443C SSN2 transcription factor M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 33 YCR023C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 33 YDR503C LPP1 Lipid phosphate phosphatase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 32 YEL020C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 32 YEL020W-A TIM9 mitochondrial inner membrane translocase M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 32 YGR248W SOL4 similar to SOL3 M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 31 YBR046C ZTA1 Homolog to quinone oxidoreductase (E. coli) M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 31 YCR059C YIH1 M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 30 YDR518W EUG1 Protein disulfide isomerase homolog M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 30 YER170W ADK2 Adenylate kinase (mitochondrial GTP:AMP phosphotransferase) M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 30 YPR015C Hypothetical ORF M[24] SCG.HGGS. Novel: Phd1 (hits tRNAs) down 1 30 YOR262W Protein required for cell viability M[24] M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 92 YPL140C MKK2 protein kinase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 81 YOR373W NUD1 spindle pole body protein M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 80 YLL038C ENT4 Ent4p M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 78 YKL029C MAE1 mitochondrial malic enzyme M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 63 YCR011C ADP1 Active transport ATPase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 62 YEL020C Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 2 62 YEL020W-A TIM9 mitochondrial inner membrane translocase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 61 YGL027C CWH41 glucosidase I M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 54 YLR095C IOC2 ISWI One Complex M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 52 YOR180C DCI1 Peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 51 YGL181W GTS1 Glycine-threonine-serine repeat protein M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 49 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YKL132C RMA1 probable folyl-polyglutamate synthetase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YDL198C YHM1 (putative) mitochondrial carrier protein M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YKL127W PGM1 phosphoglucomutase, minor isoform M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YPL194W DDC1 DNA damage checkpoint gene M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YGR237C Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YBR293W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YKL143W LTV1 low temperature viability protein M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 48 YGR121C MEP1 ammonia permease M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 47 YPR037C ERV2 M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 47 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 47 YPR137W RRP9 U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing. M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 47 YPR138C MEP3 NH4+ transporter, highly similar to Mep1p and Mep2p M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 47 YJL043W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 46 YDR221W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 45 YPL113C Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 45 YBR222C FAT2 Probable AMP-binding protein M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 45 YJL118W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 44 YGL073W HSF1 heat shock transcription factor M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 44 YJL018W Protein required for cell viability M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 44 YOR033C EXO1 exonuclease M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 44 YIL003W DRE3 Protein required for cell viability M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 44 YIL002C INP51 phosphatidylinositol 4,5-bisphosphate 5-phosphatase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 43 YOR377W ATF1 Alcohol acetyltransferase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 41 YGR049W SCM4 suppressor of cdc4 mutations M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 41 YGR141W VPS62 M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 41 YER095W RAD51 RecA homolog; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 41 YNL234W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 41 YNL161W CBK1 Protein kinase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 40 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 36 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 35 YBR286W APE3 Aminopeptidase yscIII M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 35 YER178W PDA1 alpha subunit of pyruvate dehydrogenase (E1 alpha) M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 35 YPR019W CDC54 Involved in initiation of DNA replication M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 35 YOR337W TEA1 Ty1 enhancer activator M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 35 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 34 YDR361C BCP1 Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 34 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 34 YER115C SPR6 involved in sporulation M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 34 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 33 YDR506C Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 33 YLR307W CDA1 Chitin Deacetylase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 33 YHR098C SFB3 binds to Sed5p and Sec23p by distinct domains M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 33 YPR139C VPS66 M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 33 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 32 YFL002C SPB4 ATP-dependent RNA helicase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 32 YOR012W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 32 YJL089W SIP4 shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region; lexA-Sip4p activates transcription M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 32 YOR226C ISU2 Iron-sulfur cluster nifU-like protein M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 31 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 31 YAL062W GDH3 NADP-linked glutamate dehydrogenase M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 31 YHR097C Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 31 YIL104C SHQ1 Essential protein involved in snoRNA accumulation. M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 30 YBR056W Hypothetical ORF M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 30 YBR057C MUM2 similar to ubiquitin C-terminal hydrolase, involved in meiosis M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 30 YOL020W TAT2 Tryptophan permease, high affinity M[25] ACAGCCGCRY Novel: Expression Cluster 37 down 1 30 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[25] M[26] DCGCGGGGH Known: Mig1b down 3 106 YHR049W FSH1 M[26] DCGCGGGGH Known: Mig1b down 2 87 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[26] DCGCGGGGH Known: Mig1b down 2 83 YER176W ECM32 DNA Helicase I M[26] DCGCGGGGH Known: Mig1b down 2 79 YGR068C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 2 72 YIL123W SIM1 (putative) invovled in control of DNA replication M[26] DCGCGGGGH Known: Mig1b down 2 71 YDR059C UBC5 ubiquitin-conjugating enzyme M[26] DCGCGGGGH Known: Mig1b down 2 69 YPL231W FAS2 alpha subunit of fatty acid synthase M[26] DCGCGGGGH Known: Mig1b down 1 51 YOR112W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 51 YOR337W TEA1 Ty1 enhancer activator M[26] DCGCGGGGH Known: Mig1b down 1 51 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[26] DCGCGGGGH Known: Mig1b down 1 50 YLR401C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 50 YKL186C MTR2 mRNA transport regulator M[26] DCGCGGGGH Known: Mig1b down 1 50 YKL029C MAE1 mitochondrial malic enzyme M[26] DCGCGGGGH Known: Mig1b down 1 48 YHR113W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 48 YGL159W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 47 YLR045C STU2 spindle pole body component M[26] DCGCGGGGH Known: Mig1b down 1 47 YPL140C MKK2 protein kinase M[26] DCGCGGGGH Known: Mig1b down 1 45 YNR051C BRE5 protein of unknown function M[26] DCGCGGGGH Known: Mig1b down 1 44 YKL114C APN1 major apurinic/apyrimidinic endonuclease/3'-repair diesterase M[26] DCGCGGGGH Known: Mig1b down 1 44 YHR058C MED6 RNA polymerase II mediator subunit M[26] DCGCGGGGH Known: Mig1b down 1 44 YMR198W CIK1 spindle pole body associated protein M[26] DCGCGGGGH Known: Mig1b down 1 41 YER175C TMT1 Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 41 YDR107C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 41 YDR106W ARP10 Actin-related protein M[26] DCGCGGGGH Known: Mig1b down 1 38 YGR261C APL6 putative beta adaptin component of the membrane-associate clathrin assembly complex M[26] DCGCGGGGH Known: Mig1b down 1 38 YGR260W TNA1 Tna1p is a high affinity nicotinic acid plasma membrane permease M[26] DCGCGGGGH Known: Mig1b down 1 38 YOR371C KRH2 Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YML079W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YIL146C ECM37 (putative) involved in cell wall biogenesis M[26] DCGCGGGGH Known: Mig1b down 1 38 YDR530C APA2 5',5'''-P-1,P-4-tetraphosphate phosphorylase II M[26] DCGCGGGGH Known: Mig1b down 1 38 YFR015C GSY1 Glycogen synthase (UDP-gluocse--starch glucosyltransferase) M[26] DCGCGGGGH Known: Mig1b down 1 38 YHR162W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YLR190W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YJR044C VPS55 YJR044c M[26] DCGCGGGGH Known: Mig1b down 1 38 YIL043C CBR1 cytochrome b reductase M[26] DCGCGGGGH Known: Mig1b down 1 38 YHR172W SPC97 spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP M[26] DCGCGGGGH Known: Mig1b down 1 38 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[26] DCGCGGGGH Known: Mig1b down 1 38 YJL118W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YNL092W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YLR024C UBR2 ubiquitin-protein ligase (E3) M[26] DCGCGGGGH Known: Mig1b down 1 38 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[26] DCGCGGGGH Known: Mig1b down 1 38 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[26] DCGCGGGGH Known: Mig1b down 1 38 YJL102W MEF2 mitochondrial elongation factor G-like protein M[26] DCGCGGGGH Known: Mig1b down 1 38 YJL101C GSH1 gamma-glutamylcysteine synthetase M[26] DCGCGGGGH Known: Mig1b down 1 38 YJL123C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YNL282W POP3 RNase P and RNase MRP subunit M[26] DCGCGGGGH Known: Mig1b down 1 38 YER166W DNF1 Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YOR039W CKB2 Casein kinase II, beta' subunit M[26] DCGCGGGGH Known: Mig1b down 1 38 YDR376W ARH1 adrenodoxin oxidoreductase homolog M[26] DCGCGGGGH Known: Mig1b down 1 38 YMR105C PGM2 Phosphoglucomutase M[26] DCGCGGGGH Known: Mig1b down 1 38 YPR015C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YIL150C DNA43 (putative) involved in DNA replication M[26] DCGCGGGGH Known: Mig1b down 1 38 YLL002W RTT109 diepoxybutane and mitomycin C resistance M[26] DCGCGGGGH Known: Mig1b down 1 38 YER034W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YMR099C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 38 YBR052C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 37 YDR246W TRS23 TRAPP subunit of 23 kDa M[26] DCGCGGGGH Known: Mig1b down 1 37 YPR051W MAK3 N-acetyltransferase M[26] DCGCGGGGH Known: Mig1b down 1 37 YPR052C NHP6A 11-kDa nonhistone chromosomal protein M[26] DCGCGGGGH Known: Mig1b down 1 37 YLR363W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[26] DCGCGGGGH Known: Mig1b down 1 37 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[26] DCGCGGGGH Known: Mig1b down 1 37 YER048C CAJ1 homologous to E. coli DnaJ M[26] DCGCGGGGH Known: Mig1b down 1 37 YNL133C FYV6 Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 37 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[26] DCGCGGGGH Known: Mig1b down 1 37 YOR262W Protein required for cell viability M[26] DCGCGGGGH Known: Mig1b down 1 37 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[26] DCGCGGGGH Known: Mig1b down 1 37 YHR182W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 36 YDL125C HNT1 similarity to protein kinase C inhibitor-I M[26] DCGCGGGGH Known: Mig1b down 1 36 YMR251W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 36 YBR133C HSL7 regulator of Swe1p kinase M[26] DCGCGGGGH Known: Mig1b down 1 35 YJR112W NNF1 nuclear envelope protein M[26] DCGCGGGGH Known: Mig1b down 1 35 YJR113C RSM7 mitochondrial ribosome small subunit component M[26] DCGCGGGGH Known: Mig1b down 1 35 YNR003C RPC34 34-kDa subunit of RNA polymerase III (C) M[26] DCGCGGGGH Known: Mig1b down 1 35 YPR124W CTR1 Copper transport protein M[26] DCGCGGGGH Known: Mig1b down 1 35 YGR277C Protein required for cell viability M[26] DCGCGGGGH Known: Mig1b down 1 35 YPL191C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 35 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[26] DCGCGGGGH Known: Mig1b down 1 35 YJR126C VPS70 M[26] DCGCGGGGH Known: Mig1b down 1 35 YNL200C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 35 YGL081W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 35 YNL072W RNH35 RNase H(35), a 35 kDa ribonuclease H M[26] DCGCGGGGH Known: Mig1b down 1 35 YDR061W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 35 YPR183W DPM1 dolichol phosphate mannose synthase M[26] DCGCGGGGH Known: Mig1b down 1 35 YGR096W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 35 YDR293C SSD1 Product of gene unknown M[26] DCGCGGGGH Known: Mig1b down 1 35 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[26] DCGCGGGGH Known: Mig1b down 1 34 YDR218C SPR28 septin-related protein expressed during sporulation M[26] DCGCGGGGH Known: Mig1b down 1 34 YKR054C DYN1 heavy chain of cytoplasmic dynein M[26] DCGCGGGGH Known: Mig1b down 1 34 YMR010W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YFL037W TUB2 beta-tubulin M[26] DCGCGGGGH Known: Mig1b down 1 34 YKL081W TEF4 Translation elongation factor EF-1gamma M[26] DCGCGGGGH Known: Mig1b down 1 34 YNL193W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YHR177W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YBR136W MEC1 similar to phosphatidylinositol(PI)3-kinases required for DNA damage induced checkpoint responses in G1, S/M, intra S, and G2/M in mitosis M[26] DCGCGGGGH Known: Mig1b down 1 34 YDR007W TRP1 n-(5'-phosphoribosyl)-anthranilate isomerase M[26] DCGCGGGGH Known: Mig1b down 1 34 YHR122W Protein required for cell viability M[26] DCGCGGGGH Known: Mig1b down 1 34 YPR006C ICL2 Isocitrate lyase, may be nonfunctional M[26] DCGCGGGGH Known: Mig1b down 1 34 YLR257W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YLR323C CWC24 Protein required for cell viability M[26] DCGCGGGGH Known: Mig1b down 1 34 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[26] DCGCGGGGH Known: Mig1b down 1 34 YMR068W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[26] DCGCGGGGH Known: Mig1b down 1 34 YIL154C IMP2' transcription factor M[26] DCGCGGGGH Known: Mig1b down 1 34 YPR139C VPS66 M[26] DCGCGGGGH Known: Mig1b down 1 34 YCR051W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YOR373W NUD1 spindle pole body protein M[26] DCGCGGGGH Known: Mig1b down 1 34 YCR023C Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 34 YGR017W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 33 YLL029W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 33 YER065C ICL1 isocitrate lyase M[26] DCGCGGGGH Known: Mig1b down 1 33 YPL133C RDS2 Transcriptional regulator M[26] DCGCGGGGH Known: Mig1b down 1 33 YCR011C ADP1 Active transport ATPase M[26] DCGCGGGGH Known: Mig1b down 1 33 YOR162C YRR1 transcription factor M[26] DCGCGGGGH Known: Mig1b down 1 33 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[26] DCGCGGGGH Known: Mig1b down 1 32 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[26] DCGCGGGGH Known: Mig1b down 1 32 YGL189C RPS26A Ribosomal protein S26A M[26] DCGCGGGGH Known: Mig1b down 1 31 YNL098C RAS2 Small, GTP-binding protein M[26] DCGCGGGGH Known: Mig1b down 1 31 YNL066W SUN4 Protein involved in the aging process M[26] DCGCGGGGH Known: Mig1b down 1 31 YDL078C MDH3 malate dehydrogenase M[26] DCGCGGGGH Known: Mig1b down 1 31 YBR250W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 31 YMR273C ZDS1 peripheral plasma membrane protein M[26] DCGCGGGGH Known: Mig1b down 1 31 YKL098W Hypothetical ORF M[26] DCGCGGGGH Known: Mig1b down 1 31 YGR204W ADE3 encodes the cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase M[26] DCGCGGGGH Known: Mig1b down 1 30 YMR104C YPK2 protein kinase M[26] DCGCGGGGH Known: Mig1b down 1 30 YFR021W AUT10 Hypothetical ORF M[26] M[27] SKGTGGSGc Known: Met31 down 1 50 YOL066C RIB2 DRAP deaminase M[27] SKGTGGSGc Known: Met31 down 1 50 YMR084W Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 49 YGL183C MND1 M[27] SKGTGGSGc Known: Met31 down 1 49 YLR248W RCK2 Serine/threonine protein kinase M[27] SKGTGGSGc Known: Met31 down 1 49 YNL192W CHS1 chitin synthase 1 M[27] SKGTGGSGc Known: Met31 down 1 49 YFL008W SMC1 SMC chromosomal ATPase family member M[27] SKGTGGSGc Known: Met31 down 1 48 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[27] SKGTGGSGc Known: Met31 down 1 46 YAL013W DEP1 regulation of phospholipid metabolism M[27] SKGTGGSGc Known: Met31 down 1 46 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[27] SKGTGGSGc Known: Met31 down 1 44 YLR412W Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 44 YPR159W KRE6 potential beta-glucan synthase M[27] SKGTGGSGc Known: Met31 down 1 43 YPR079W MRL1 M[27] SKGTGGSGc Known: Met31 down 1 43 YGL181W GTS1 Glycine-threonine-serine repeat protein M[27] SKGTGGSGc Known: Met31 down 1 43 YDR113C PDS1 42-kDa nuclear protein M[27] SKGTGGSGc Known: Met31 down 1 42 YDR363W ESC2 establishes silent chromatin M[27] SKGTGGSGc Known: Met31 down 1 42 YKL125W RRN3 DNA-independent RNA Polymerase I transcription factor M[27] SKGTGGSGc Known: Met31 down 1 42 YPL184C Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 42 YEL036C ANP1 subunit of mannosyltransferase complex M[27] SKGTGGSGc Known: Met31 down 1 42 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[27] SKGTGGSGc Known: Met31 down 1 42 YDR361C BCP1 Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 42 YDR503C LPP1 Lipid phosphate phosphatase M[27] SKGTGGSGc Known: Met31 down 1 41 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[27] SKGTGGSGc Known: Met31 down 1 41 YDR221W Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 39 YBR284W Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 39 YLR024C UBR2 ubiquitin-protein ligase (E3) M[27] SKGTGGSGc Known: Met31 down 1 39 YOR355W GDS1 involved in nuclear control of mitochondria M[27] SKGTGGSGc Known: Met31 down 1 39 YHR011W DIA4 involved in invasive and pseudohyphal growth M[27] SKGTGGSGc Known: Met31 down 1 37 YJR044C VPS55 YJR044c M[27] SKGTGGSGc Known: Met31 down 1 37 YKL073W LHS1 novel member of the Hsp70 family of molecular chaperones that localizes to the lumen of the endoplasmic reticulum: M[27] SKGTGGSGc Known: Met31 down 1 37 YOL135C MED7 Stoichiometric member of mediator complex M[27] SKGTGGSGc Known: Met31 down 1 36 YER085C Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 36 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[27] SKGTGGSGc Known: Met31 down 1 35 YPL231W FAS2 alpha subunit of fatty acid synthase M[27] SKGTGGSGc Known: Met31 down 1 35 YBR056W Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 35 YBR057C MUM2 similar to ubiquitin C-terminal hydrolase, involved in meiosis M[27] SKGTGGSGc Known: Met31 down 1 35 YOR358W HAP5 Component, along with Hap2p and Hap3p, of CCAAT-binding transcription factor M[27] SKGTGGSGc Known: Met31 down 1 34 YER066W Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 34 YOR179C Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 34 YKL172W EBP2 Nucleolar protein M[27] SKGTGGSGc Known: Met31 down 1 32 YMR119W ASI1 M[27] SKGTGGSGc Known: Met31 down 1 32 YMR120C ADE17 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase M[27] SKGTGGSGc Known: Met31 down 1 32 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[27] SKGTGGSGc Known: Met31 down 1 31 YER096W SHC1 sporulation-specific homolog of csd4 M[27] SKGTGGSGc Known: Met31 down 1 31 YPR015C Hypothetical ORF M[27] SKGTGGSGc Known: Met31 down 1 31 YHR094C HXT1 High-affinity hexose (glucose) transporter M[27] SKGTGGSGc Known: Met31 down 1 30 YGR054W Hypothetical ORF M[27] M[28] TTTT...................GCKCG Known: No cat down 3 136 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[28] TTTT...................GCKCG Known: No cat down 3 103 YJL157C FAR1 Cdc28p kinase inhibitor M[28] TTTT...................GCKCG Known: No cat down 2 80 YDR212W TCP1 chaperonin subunit alpha M[28] TTTT...................GCKCG Known: No cat down 2 67 YMR016C SOK2 displays homologies to several transcription factors M[28] TTTT...................GCKCG Known: No cat down 1 56 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[28] TTTT...................GCKCG Known: No cat down 1 51 YHR136C SPL2 17 kDa protein M[28] TTTT...................GCKCG Known: No cat down 1 47 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[28] TTTT...................GCKCG Known: No cat down 1 47 YPL239W YAR1 YAR1 encodes a 200-amino-acid protein with two ANK repeat motifs and an acidic C terminus rich in PEST-like sequences M[28] TTTT...................GCKCG Known: No cat down 1 44 YDL181W INH1 ATPase inhibitor M[28] TTTT...................GCKCG Known: No cat down 1 44 YLR356W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 44 YJL118W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 44 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[28] TTTT...................GCKCG Known: No cat down 1 44 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[28] TTTT...................GCKCG Known: No cat down 1 44 YER089C PTC2 Protein phosphatase type 2C M[28] TTTT...................GCKCG Known: No cat down 1 44 YDL109C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 43 YOR285W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 43 YJL109C UTP10 Protein required for cell viability M[28] TTTT...................GCKCG Known: No cat down 1 43 YER085C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 43 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[28] TTTT...................GCKCG Known: No cat down 1 43 YNL024C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 43 YBL104C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 43 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[28] TTTT...................GCKCG Known: No cat down 1 42 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[28] TTTT...................GCKCG Known: No cat down 1 42 YBR056W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 42 YBR057C MUM2 similar to ubiquitin C-terminal hydrolase, involved in meiosis M[28] TTTT...................GCKCG Known: No cat down 1 41 YGR013W SNU71 U1 snRNP protein M[28] TTTT...................GCKCG Known: No cat down 1 41 YIL142W CCT2 molecular chaperone M[28] TTTT...................GCKCG Known: No cat down 1 41 YOR307C SLY41 homolog of chloroplast phosphate transporter M[28] TTTT...................GCKCG Known: No cat down 1 41 YBR284W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 41 YER129W PAK1 DNA polymerase alpha suppressing protein kinase M[28] TTTT...................GCKCG Known: No cat down 1 41 YER130C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 41 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[28] TTTT...................GCKCG Known: No cat down 1 41 YJR106W ECM27 (putative) involved in cell wall biogenesis M[28] TTTT...................GCKCG Known: No cat down 1 40 YMR198W CIK1 spindle pole body associated protein M[28] TTTT...................GCKCG Known: No cat down 1 40 YNL056W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 40 YNL055C POR1 Outer mitochondrial membrane porin (voltage-dependent anion channel, or VDAC) M[28] TTTT...................GCKCG Known: No cat down 1 40 YPL249C GYP5 Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 40 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[28] TTTT...................GCKCG Known: No cat down 1 40 YGR248W SOL4 similar to SOL3 M[28] TTTT...................GCKCG Known: No cat down 1 39 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[28] TTTT...................GCKCG Known: No cat down 1 39 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[28] TTTT...................GCKCG Known: No cat down 1 39 YBR060C ORC2 origin recognition complex subunit 2 M[28] TTTT...................GCKCG Known: No cat down 1 39 YBR133C HSL7 regulator of Swe1p kinase M[28] TTTT...................GCKCG Known: No cat down 1 39 YLR401C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 38 YHR178W STB5 Zinc finger (6-Cys) M[28] TTTT...................GCKCG Known: No cat down 1 38 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[28] TTTT...................GCKCG Known: No cat down 1 38 YPL016W SWI1 Zinc-finger transcription factor M[28] TTTT...................GCKCG Known: No cat down 1 38 YPL015C HST2 similar to Sir2p M[28] TTTT...................GCKCG Known: No cat down 1 38 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[28] TTTT...................GCKCG Known: No cat down 1 38 YER176W ECM32 DNA Helicase I M[28] TTTT...................GCKCG Known: No cat down 1 38 YGR193C PDX1 Protein X component of mitochondrial pyruvate dehydrogenase complex M[28] TTTT...................GCKCG Known: No cat down 1 38 YIL123W SIM1 (putative) invovled in control of DNA replication M[28] TTTT...................GCKCG Known: No cat down 1 38 YBR147W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 38 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[28] TTTT...................GCKCG Known: No cat down 1 37 YHR189W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 37 YGL181W GTS1 Glycine-threonine-serine repeat protein M[28] TTTT...................GCKCG Known: No cat down 1 37 YDR310C SUM1 nuclear protein involved in silencing M[28] TTTT...................GCKCG Known: No cat down 1 37 YDR527W Protein required for cell viability M[28] TTTT...................GCKCG Known: No cat down 1 37 YER080W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 37 YPL063W Protein required for cell viability M[28] TTTT...................GCKCG Known: No cat down 1 37 YDR351W SBE2 involved in bud growth M[28] TTTT...................GCKCG Known: No cat down 1 37 YJL008C CCT8 Component of Chaperonin Containing T-complex subunit eight M[28] TTTT...................GCKCG Known: No cat down 1 36 YKL127W PGM1 phosphoglucomutase, minor isoform M[28] TTTT...................GCKCG Known: No cat down 1 36 YKL186C MTR2 mRNA transport regulator M[28] TTTT...................GCKCG Known: No cat down 1 36 YKR084C HBS1 Protein related to translation elongation factor EF-1alpha and to Suf12p/Sup2p/Gst1p/Sup35p M[28] TTTT...................GCKCG Known: No cat down 1 35 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[28] TTTT...................GCKCG Known: No cat down 1 35 YPR037C ERV2 M[28] TTTT...................GCKCG Known: No cat down 1 35 YDR317W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 35 YJL155C FBP26 fructose-2,6-bisphosphatase M[28] TTTT...................GCKCG Known: No cat down 1 34 YGL146C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 34 YPR167C MET16 3'phosphoadenylylsulfate reductase M[28] TTTT...................GCKCG Known: No cat down 1 34 YNL161W CBK1 Protein kinase M[28] TTTT...................GCKCG Known: No cat down 1 34 YPL250C ICY2 interacting with the cytoskeleton M[28] TTTT...................GCKCG Known: No cat down 1 34 YLL038C ENT4 Ent4p M[28] TTTT...................GCKCG Known: No cat down 1 34 YJR140C HIR3 regulator of histone transcription M[28] TTTT...................GCKCG Known: No cat down 1 34 YIL026C IRR1 cohesin complex subunit M[28] TTTT...................GCKCG Known: No cat down 1 34 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[28] TTTT...................GCKCG Known: No cat down 1 34 YLR295C ATP14 ATP synthase subunit h M[28] TTTT...................GCKCG Known: No cat down 1 34 YBR135W CKS1 subunit of the Cdc28 protein kinase M[28] TTTT...................GCKCG Known: No cat down 1 34 YOR284W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 34 YBR239C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 33 YDL128W VCX1 vacuolar H+/Ca2+ exchanger M[28] TTTT...................GCKCG Known: No cat down 1 33 YIL077C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 33 YIL078W THS1 Threonyl-tRNA synthetase, cytoplasmic M[28] TTTT...................GCKCG Known: No cat down 1 33 YFR003C Protein required for cell viability M[28] TTTT...................GCKCG Known: No cat down 1 33 YFR002W NIC96 96 kDa nucleoporin-interacting component M[28] TTTT...................GCKCG Known: No cat down 1 33 YER164W CHD1 transcriptional regulator M[28] TTTT...................GCKCG Known: No cat down 1 33 YKR041W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 33 YLL051C FRE6 similar to FRE2 M[28] TTTT...................GCKCG Known: No cat down 1 33 YLR223C IFH1 has a weak RNA-dependent ATPase activity which is not specific for rRNA M[28] TTTT...................GCKCG Known: No cat down 1 33 YPL126W NAN1 Net1-Associated Nucleolar protein 1 M[28] TTTT...................GCKCG Known: No cat down 1 33 YMR068W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 33 YPL176C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 32 YCR079W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 32 YNL066W SUN4 Protein involved in the aging process M[28] TTTT...................GCKCG Known: No cat down 1 31 YNL088W TOP2 topoisomerase II, Top2p localizes to axial cores in meiosis M[28] TTTT...................GCKCG Known: No cat down 1 31 YHL010C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 31 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[28] TTTT...................GCKCG Known: No cat down 1 31 YPL155C KIP2 kinesin-related protein M[28] TTTT...................GCKCG Known: No cat down 1 31 YDR425W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 31 YOR310C NOP58 57 kDa nucleolar protein M[28] TTTT...................GCKCG Known: No cat down 1 31 YJR034W PET191 involved in cytochrome c oxidase assembly M[28] TTTT...................GCKCG Known: No cat down 1 31 YDR119W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 31 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[28] TTTT...................GCKCG Known: No cat down 1 31 YBR205W KTR3 Putative alpha-1,2-mannosyltransferase M[28] TTTT...................GCKCG Known: No cat down 1 31 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[28] TTTT...................GCKCG Known: No cat down 1 31 YKL192C ACP1 mitochondrial acyl carrier protein M[28] TTTT...................GCKCG Known: No cat down 1 30 YEL020C Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 30 YEL020W-A TIM9 mitochondrial inner membrane translocase M[28] TTTT...................GCKCG Known: No cat down 1 30 YGL254W FZF1 putative transcription factor, has five zinc fingers M[28] TTTT...................GCKCG Known: No cat down 1 30 YMR084W Hypothetical ORF M[28] TTTT...................GCKCG Known: No cat down 1 30 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[28] M[29] hRCCCYTWDt. Known: Msn2/4 down 2 82 YNL243W SLA2 transmembrane protein M[29] hRCCCYTWDt. Known: Msn2/4 down 2 79 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[29] hRCCCYTWDt. Known: Msn2/4 down 2 77 YGL189C RPS26A Ribosomal protein S26A M[29] hRCCCYTWDt. Known: Msn2/4 down 2 76 YPR116W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 2 75 YPL176C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 2 70 YBR213W MET8 Effector in the expression of PAPS reductase and sulfite reductase M[29] hRCCCYTWDt. Known: Msn2/4 down 2 69 YER066W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 2 68 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[29] hRCCCYTWDt. Known: Msn2/4 down 2 66 YPL231W FAS2 alpha subunit of fatty acid synthase M[29] hRCCCYTWDt. Known: Msn2/4 down 2 66 YBR086C IST2 Probable transmembrane protein M[29] hRCCCYTWDt. Known: Msn2/4 down 2 63 YPL063W Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 2 61 YDR030C RAD28 involved in DNA repair, has WD repeats M[29] hRCCCYTWDt. Known: Msn2/4 down 1 46 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[29] hRCCCYTWDt. Known: Msn2/4 down 1 45 YMR183C SSO2 post-Golgi t-SNARE M[29] hRCCCYTWDt. Known: Msn2/4 down 1 45 YKL127W PGM1 phosphoglucomutase, minor isoform M[29] hRCCCYTWDt. Known: Msn2/4 down 1 45 YOR330C MIP1 catalytic subunit of mitochondrial DNA polymerase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 45 YLL046C RNP1 ribonucleoprotein 1 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 44 YIL145C PAN6 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 44 YNL209W SSB2 Heat shock protein of HSP70 family, homolog of SSB1 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 43 YCR011C ADP1 Active transport ATPase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 43 YNL161W CBK1 Protein kinase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 43 YOL047C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 42 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 42 YDR336W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 42 YDL085W NDE2 Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 42 YBL006C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 41 YPR147C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 41 YPR145W ASN1 asparagine synthetase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 40 YDR246W TRS23 TRAPP subunit of 23 kDa M[29] hRCCCYTWDt. Known: Msn2/4 down 1 40 YDR256C CTA1 catalase A M[29] hRCCCYTWDt. Known: Msn2/4 down 1 40 YKL128C PMU1 Phospo-mutase homolog M[29] hRCCCYTWDt. Known: Msn2/4 down 1 40 YBL074C AAR2 MATa1-mRNA splicing factor M[29] hRCCCYTWDt. Known: Msn2/4 down 1 40 YOL130W ALR1 putative ion transporter M[29] hRCCCYTWDt. Known: Msn2/4 down 1 40 YOR156C NFI1 interacts with C-terminus of CDC12 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 39 YKL187C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 39 YFL042C Due to a sequence change (deletion of G at 46151), YFL043C is now part of YFL042C. M[29] hRCCCYTWDt. Known: Msn2/4 down 1 39 YHL034C SBP1 Single-strand nucleic acid binding protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 39 YPL248C GAL4 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YKL193C SDS22 Glc7p regulatory subunit M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YJL054W TIM54 Translocase for the insertion of proteins into the mitochondrial inner membrane. M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YPL246C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YOR113W AZF1 similar to Zn-finger transcription factors M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YGR166W KRE11 involved in cell wall biogenesis M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YNR036C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YJL010C Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YDL219W DTD1 D-Tyr-tRNA(Tyr) deacylase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YMR139W RIM11 Serine/threonine protein kinase, phosphorylates the mitotic activator IME1 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YPL190C NAB3 nuclear polyadenylated RNA/single strand DNA-binding protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YPL158C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YDL100C ARR4 resistance to arsenicals M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YNL166C BNI5 bud neck protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YNL200C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 38 YDR444W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YPR082C DIB1 17 kD U4/U6.U5 associated protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YJR034W PET191 involved in cytochrome c oxidase assembly M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YPL184C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YGL181W GTS1 Glycine-threonine-serine repeat protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YCL014W BUD3 involved in bud site selection M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YCL011C GBP2 Protein with RNA recognition motifs M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YFR016C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YIL061C SNP1 U1snRNP 70K protein homolog M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YER055C HIS1 ATP phosphoribosyltransferase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YPR159W KRE6 potential beta-glucan synthase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YML086C ALO1 D-arabinono-1,4-lactone oxidase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 37 YBR281C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YKL034W TUL1 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YLR219W MSC3 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YMR259C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YCR032W BPH1 (putative) acetic acid export pump M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YJR082C EAF6 YJR082c M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YBR239C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YGR049W SCM4 suppressor of cdc4 mutations M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YMR251W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YDL133W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YKL065C YET1 Yeast endoplasmic reticulum 25 kDa transmembrane protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YKL067W YNK1 Nucleoside diphosphate kinase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YOR125C CAT5 may encode a protein involved in one or more monoxygenase or hydroxylase steps of ubiquinone biosynthesis M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YCR063W BUD31 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YMR263W SAP30 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YNL182C Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 1 36 YGR248W SOL4 similar to SOL3 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YOR267C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YOR266W PNT1 involved in pentamidine resistance protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YKL049C CSE4 high similarity to histone H3 and to human centromere protein CENP-A M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YNL093W YPT53 GTP-binding protein of the rab family M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YLR410W VIP1 Homologous to S. pombe asp1+ M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YJL153C INO1 L-myo-inositol-1-phosphate synthase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YOL084W PHM7 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YOR021C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YMR014W BUD22 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YMR015C ERG5 cytochrome P450 involved in C-22 denaturation of the ergosterol side-chain M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YPR183W DPM1 dolichol phosphate mannose synthase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[29] hRCCCYTWDt. Known: Msn2/4 down 1 35 YDL220C CDC13 binds to single-stranded TG1-3 telomere G-tails M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YBR071W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YLR002C NOC3 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YGR140W CBF2 110 kDa subunit of the centromere binding factor CBF3 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YML119W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YEL031W SPF1 P-type ATPase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YMR321C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YOR162C YRR1 transcription factor M[29] hRCCCYTWDt. Known: Msn2/4 down 1 34 YOR371C KRH2 Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YOR271C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YER176W ECM32 DNA Helicase I M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YHR086W NAM8 putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YDR072C IPT1 inositolphosphotransferase 1 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YJR031C GEA1 GDP/GTP exchange factor M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YGR237C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YBR046C ZTA1 Homolog to quinone oxidoreductase (E. coli) M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YBR053C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YHR028C DAP2 Dipeptidyl aminopeptidase B (DPAP B) M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YLL022C HIF1 interacts with histone acetyltransferase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YHR009C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 33 YHL031C GOS1 Golgi SNARE protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YGR261C APL6 putative beta adaptin component of the membrane-associate clathrin assembly complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YGR260W TNA1 Tna1p is a high affinity nicotinic acid plasma membrane permease M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YGL097W SRM1 pheromone response pathway suppressor M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YDR073W SNF11 component of SWI/SNF global transcription activator complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YMR083W ADH3 alcohol dehydrogenase isoenzyme III M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YKL108W SLD2 Synthetically lethal with dpb11-1; required for DNA replication M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YMR198W CIK1 spindle pole body associated protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YOR310C NOP58 57 kDa nucleolar protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YFR009W GCN20 Member of ATP-binding cassette (ABC) family of proteins M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YOR373W NUD1 spindle pole body protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YKL078W DHR2 Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YJL138C TIF2 translation initiation factor eIF4A M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YBR160W CDC28 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YHR036W Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 1 32 YLL023C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YOR033C EXO1 exonuclease M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YKR053C YSR3 DHS-1-P phosphatase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YMR102C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YPL016W SWI1 Zinc-finger transcription factor M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YPL015C HST2 similar to Sir2p M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YLR045C STU2 spindle pole body component M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YNL016W PUB1 poly(A)+ RNA-binding protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YCL055W KAR4 transcription factor involved in karyogamy M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YPR125W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YAL009W SPO7 sporulation protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YGR239C PEX21 Peroxin Pex21p M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YJL163C Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YNL190W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YOR091W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YPR023C EAF3 stable component of the NuA4 complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YKL099C UTP11 Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YER053C sequence similarity to mitochondrial phosphate transporters M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YPL204W HRR25 casein kinase I isoform M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YJR127C ZMS1 Product of gene unknown M[29] hRCCCYTWDt. Known: Msn2/4 down 1 31 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YDR059C UBC5 ubiquitin-conjugating enzyme M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YDR323C PEP7 cytosolic and peripheral membrane protein with three zinc fingers; cysteine rich regions of amino acids are essential for function M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YBR205W KTR3 Putative alpha-1,2-mannosyltransferase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YOR283W Hypothetical ORF M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YGR078C PAC10 Polypeptide 3 of a Yeast Non-native Actin Binding Complex, homolog of a component of the bovine NABC complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YDR077W SED1 putative cell surface glycoprotein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YDR078C SHU2 M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YHR031C RRM3 DNA helicase M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YPR184W GDB1 Glycogen debranching enzyme M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YJR095W SFC1 mitochondrial succinate-fumarate transport protein M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YOR056C NOB1 Protein required for cell viability M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YHR193C EGD2 GAL4 enhancer protein, homolog of human alpha NAC subunit of the nascent-polypeptide-associated complex M[29] hRCCCYTWDt. Known: Msn2/4 down 1 30 YHR192W Hypothetical ORF M[29] M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 5 203 YDR388W RVS167 (putative) cytoskeletal protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 87 YNL161W CBK1 Protein kinase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 79 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 78 YEL020C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 78 YEL020W-A TIM9 mitochondrial inner membrane translocase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 77 YMR099C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 76 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 76 YDR059C UBC5 ubiquitin-conjugating enzyme M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 74 YHR094C HXT1 High-affinity hexose (glucose) transporter M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 74 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 74 YML058W-A HUG1 induced by DNA damage and replication arrest M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 70 YNL299W TRF5 exhibits homology to Trf4p and Top1p M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 68 YER089C PTC2 Protein phosphatase type 2C M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 64 YPR159W KRE6 potential beta-glucan synthase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 64 YPR118W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 63 YDR076W RAD55 RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 2 62 YPL222W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 47 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 42 YMR251W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 40 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 40 YHR005C-A MRS11 component of mitochondrial import machinery M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 40 YGR013W SNU71 U1 snRNP protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 40 YPR018W RLF2 p90 subunit of yeast Chromatin Assembly Factor-I (CAF-I) M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 40 YJL157C FAR1 Cdc28p kinase inhibitor M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 39 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 39 YPL220W RPL1A Ribosomal protein L1A, forms part of the 60S ribosomal subunit M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 39 YJL102W MEF2 mitochondrial elongation factor G-like protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 39 YJL101C GSH1 gamma-glutamylcysteine synthetase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 39 YNL092W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 39 YJL168C SET2 transcription factor containing a SET domain M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YJL010C Protein required for cell viability M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YDR444W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YOR373W NUD1 spindle pole body protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YDL234C GYP7 GTPase-activating protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YDL181W INH1 ATPase inhibitor M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 38 YMR016C SOK2 displays homologies to several transcription factors M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YKL127W PGM1 phosphoglucomutase, minor isoform M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YKL098W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YIL150C DNA43 (putative) involved in DNA replication M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YPL029W SUV3 putative ATP-dependent helicase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YEL041W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 37 YOR065W CYT1 Cytochrome c1 M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 36 YLR035C MLH2 MutL Homolog M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 36 YBL006C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 36 YFR021W AUT10 Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YPL140C MKK2 protein kinase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YCL011C GBP2 Protein with RNA recognition motifs M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YCL014W BUD3 involved in bud site selection M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YGL022W STT3 Putative integral ER membrane protein; subunit of the oligosaccharyltransferase complex M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YOR039W CKB2 Casein kinase II, beta' subunit M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YCR043C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YMR262W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YGR245C SDA1 Severe Depolymerization of Actin M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YKL081W TEF4 Translation elongation factor EF-1gamma M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YNL024C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 35 YNL079C TPM1 tropomyosin I M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 34 YPR015C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 34 YHR204W MNL1 M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 34 YOR179C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 34 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 34 YER058W PET117 cytochrome c oxidase assembly factor M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YHL034C SBP1 Single-strand nucleic acid binding protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YKL086W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YKR041W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YPL045W VPS16 Vacuolar sorting protein M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YIL123W SIM1 (putative) invovled in control of DNA replication M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YPL231W FAS2 alpha subunit of fatty acid synthase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YPL063W Protein required for cell viability M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YHR097C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YNR027W BUD17 M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YLR042C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 33 YJR050W ISY1 interacts with the spliceosome M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 32 YBR201W DER1 involved in degradation in the ER M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 32 YER166W DNF1 Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 31 YGL117W Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 31 YJR129C Hypothetical ORF M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 31 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 30 YKL045W PRI2 p58 polypeptide of DNA primase M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 30 YNR037C RSM19 mitochondrial ribosome small subunit component M[30] TKCCC....GGG Known: MCM1 (hits tRNA) down 1 30 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[30] M[31] GTGTCAGTAAt Novel: Sum1 down 2 90 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[31] GTGTCAGTAAt Novel: Sum1 down 2 84 YOR178C GAC1 Regulatory subunit for Glc7p M[31] GTGTCAGTAAt Novel: Sum1 down 1 69 YKL121W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 69 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[31] GTGTCAGTAAt Novel: Sum1 down 1 60 YPR139C VPS66 M[31] GTGTCAGTAAt Novel: Sum1 down 1 56 YLR356W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 56 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[31] GTGTCAGTAAt Novel: Sum1 down 1 55 YMR310C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 53 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[31] GTGTCAGTAAt Novel: Sum1 down 1 52 YER141W COX15 cytochrome oxidase assembly factor M[31] GTGTCAGTAAt Novel: Sum1 down 1 52 YER142C MAG1 3-methyladenine DNA glycosylase M[31] GTGTCAGTAAt Novel: Sum1 down 1 51 YPL094C SEC62 membrane component of ER protein translocation apparatus M[31] GTGTCAGTAAt Novel: Sum1 down 1 51 YPL028W ERG10 acetoacetyl CoA thiolase M[31] GTGTCAGTAAt Novel: Sum1 down 1 50 YJR030C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 50 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[31] GTGTCAGTAAt Novel: Sum1 down 1 50 YLR190W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 50 YIL162W SUC2 invertase (sucrose hydrolyzing enzyme) M[31] GTGTCAGTAAt Novel: Sum1 down 1 48 YAL022C FUN26 predicted membrane protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 48 YPL022W RAD1 UV endonuclease M[31] GTGTCAGTAAt Novel: Sum1 down 1 47 YER128W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 46 YBR083W TEC1 transcription factor of the TEA/ATTS DNA-binding domain family, regulator of Ty1 expression M[31] GTGTCAGTAAt Novel: Sum1 down 1 45 YNL204C SPS18 Transcription factor M[31] GTGTCAGTAAt Novel: Sum1 down 1 44 YGL186C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 44 YGL187C COX4 subunit IV of cytochrome c oxidase M[31] GTGTCAGTAAt Novel: Sum1 down 1 43 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[31] GTGTCAGTAAt Novel: Sum1 down 1 42 YBR126C TPS1 56 kD synthase subunit of trehalose-6-phosphate synthase/phosphatase complex M[31] GTGTCAGTAAt Novel: Sum1 down 1 42 YNL218W MGS1 M[31] GTGTCAGTAAt Novel: Sum1 down 1 42 YNL024C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 42 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[31] GTGTCAGTAAt Novel: Sum1 down 1 42 YKL176C LST4 involved in regulated secretion/recycling of nitrogen regulated permeases M[31] GTGTCAGTAAt Novel: Sum1 down 1 42 YMR139W RIM11 Serine/threonine protein kinase, phosphorylates the mitotic activator IME1 M[31] GTGTCAGTAAt Novel: Sum1 down 1 41 YER129W PAK1 DNA polymerase alpha suppressing protein kinase M[31] GTGTCAGTAAt Novel: Sum1 down 1 41 YER130C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 41 YIL049W DFG10 involved in filamentous growth M[31] GTGTCAGTAAt Novel: Sum1 down 1 40 YDR329C PEX3 48-kDa peroxisomal integral membrane protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 40 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[31] GTGTCAGTAAt Novel: Sum1 down 1 40 YMR205C PFK2 phosphofructokinase beta subunit M[31] GTGTCAGTAAt Novel: Sum1 down 1 40 YER049W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 40 YER050C RSM18 mitochondrial ribosome small subunit component M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YKL178C STE3 a factor recptor M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YGL194C HOS2 (putative) histone deacetylase M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YGL195W GCN1 translational activator of GCN4 through activation of GCN2 in response to starvation M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YJL129C TRK1 180 kDa high affinity potassium transporter M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YBR039W ATP3 gamma subunit of mitochondrial ATP synthase M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YGR197C SNG1 involved in nitrosoguanidine resistance M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YBR147W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 39 YJR129C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 38 YLR197W SIK1 homology to microtubule binding proteins and to X90565_5.cds M[31] GTGTCAGTAAt Novel: Sum1 down 1 38 YLR199C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 38 YJL047C RTT101 Regulator of Ty1 Transposition M[31] GTGTCAGTAAt Novel: Sum1 down 1 38 YBR112C CYC8 Transcription regulatory protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 38 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YGR141W VPS62 M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YLR410W VIP1 Homologous to S. pombe asp1+ M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YOR243C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YGL185C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YGL120C PRP43 RNA helicase M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YDR463W STP1 Nuclear-localized protein containing zinc finger motifs M[31] GTGTCAGTAAt Novel: Sum1 down 1 37 YOR117W RPT5 26S protease regulatory subunit M[31] GTGTCAGTAAt Novel: Sum1 down 1 36 YCR072C Protein required for cell viability M[31] GTGTCAGTAAt Novel: Sum1 down 1 36 YDR403W DIT1 first enzyme in dityrosine synthesis in the outer layer of the spore wall pathway converting L-tyrosine to N-formyl-L-tyrosine, expressed late (10-16 hr) in sporulation M[31] GTGTCAGTAAt Novel: Sum1 down 1 36 YDR404C RPB7 dissociable subunit of RNA polymerase II M[31] GTGTCAGTAAt Novel: Sum1 down 1 36 YKR034W DAL80 negative regulator of multiple nitrogen catabolic genes M[31] GTGTCAGTAAt Novel: Sum1 down 1 35 YMR198W CIK1 spindle pole body associated protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 35 YOR223W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 35 YOR224C RPB8 16-kDa RNA polymerase subunit (common to polymerases I, II and III) M[31] GTGTCAGTAAt Novel: Sum1 down 1 35 YOR033C EXO1 exonuclease M[31] GTGTCAGTAAt Novel: Sum1 down 1 35 YMR273C ZDS1 peripheral plasma membrane protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 34 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[31] GTGTCAGTAAt Novel: Sum1 down 1 34 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[31] GTGTCAGTAAt Novel: Sum1 down 1 34 YDR348C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 34 YDR347W MRP1 37 kDa mitochondrial ribosomal protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 34 YKL039W PTM1 Putative membrane protein M[31] GTGTCAGTAAt Novel: Sum1 down 1 33 YBR019C GAL10 UDP-glucose 4-epimerase M[31] GTGTCAGTAAt Novel: Sum1 down 1 33 YER019W ISC1 M[31] GTGTCAGTAAt Novel: Sum1 down 1 33 YER019C-A SBH2 homologous to Sbh1p M[31] GTGTCAGTAAt Novel: Sum1 down 1 32 YNL191W Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 32 YJR121W ATP2 F(1)F(0)-ATPase complex beta subunit, mitochondrial M[31] GTGTCAGTAAt Novel: Sum1 down 1 32 YNR007C AUT1 Involved in autophagocytosis. M[31] GTGTCAGTAAt Novel: Sum1 down 1 32 YNR006W VPS27 hydrophilic protein; has cysteine rich putative zinc finger esential for function M[31] GTGTCAGTAAt Novel: Sum1 down 1 31 YPR093C Hypothetical ORF M[31] GTGTCAGTAAt Novel: Sum1 down 1 31 YLR441C RPS1A Ribosomal protein S1A (rp10A) M[31] M[32] RGTTTTTCCG Novel: Phd1 down 3 185 YHR096C HXT5 hexose transporter M[32] RGTTTTTCCG Novel: Phd1 down 3 138 YLL023C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 2 113 YER029C SMB1 U1 snRNP protein M[32] RGTTTTTCCG Novel: Phd1 down 3 106 YHR094C HXT1 High-affinity hexose (glucose) transporter M[32] RGTTTTTCCG Novel: Phd1 down 2 101 YOR307C SLY41 homolog of chloroplast phosphate transporter M[32] RGTTTTTCCG Novel: Phd1 down 2 100 YBR044C TCM62 mitochondrial protein; (putative) chaperone M[32] RGTTTTTCCG Novel: Phd1 down 2 94 YOR048C RAT1 RNA trafficking protein; transcription activator M[32] RGTTTTTCCG Novel: Phd1 down 2 94 YOR355W GDS1 involved in nuclear control of mitochondria M[32] RGTTTTTCCG Novel: Phd1 down 2 86 YMR246W FAA4 long-chain fatty acid--CoA ligase and synthetase 4 M[32] RGTTTTTCCG Novel: Phd1 down 2 86 YMR247C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 2 82 YEL020C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 2 82 YEL020W-A TIM9 mitochondrial inner membrane translocase M[32] RGTTTTTCCG Novel: Phd1 down 2 80 YFR033C QCR6 ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa) M[32] RGTTTTTCCG Novel: Phd1 down 2 80 YMR243C ZRC1 involved in zinc and cadmium ion homeostasis M[32] RGTTTTTCCG Novel: Phd1 down 2 77 YHR177W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 2 69 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[32] RGTTTTTCCG Novel: Phd1 down 2 69 YMR010W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 2 67 YGR096W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 63 YPL250C ICY2 interacting with the cytoskeleton M[32] RGTTTTTCCG Novel: Phd1 down 2 61 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[32] RGTTTTTCCG Novel: Phd1 down 1 59 YNL236W SIN4 component of RNA polymerase II holoenzyme/mediator complex M[32] RGTTTTTCCG Novel: Phd1 down 1 58 YGL254W FZF1 putative transcription factor, has five zinc fingers M[32] RGTTTTTCCG Novel: Phd1 down 1 58 YDL234C GYP7 GTPase-activating protein M[32] RGTTTTTCCG Novel: Phd1 down 1 57 YDR221W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 57 YJL083W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 53 YJL128C PBS2 MAP kinase kinase (MEK), may act as a scaffolding protein for Sho1p, Ste11p, and Hog1p M[32] RGTTTTTCCG Novel: Phd1 down 1 52 YHR047C AAP1' arginine/alanine aminopeptidase M[32] RGTTTTTCCG Novel: Phd1 down 1 51 YDR330W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 48 YPL029W SUV3 putative ATP-dependent helicase M[32] RGTTTTTCCG Novel: Phd1 down 1 46 YBR060C ORC2 origin recognition complex subunit 2 M[32] RGTTTTTCCG Novel: Phd1 down 1 46 YPL031C PHO85 cyclin-dependent protein kinase M[32] RGTTTTTCCG Novel: Phd1 down 1 45 YLR206W ENT2 Ent2p M[32] RGTTTTTCCG Novel: Phd1 down 1 45 YGR049W SCM4 suppressor of cdc4 mutations M[32] RGTTTTTCCG Novel: Phd1 down 1 45 YMR107W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 44 YNL066W SUN4 Protein involved in the aging process M[32] RGTTTTTCCG Novel: Phd1 down 1 44 YER048W-A Similar to D. melanogaster protein; weaker homology to C. elegans protein with similarity to human cdk7/cyclin H assembly factor M[32] RGTTTTTCCG Novel: Phd1 down 1 44 YHR102W KIC1 PAK/Ste20 kinase family M[32] RGTTTTTCCG Novel: Phd1 down 1 44 YGR156W PTI1 M[32] RGTTTTTCCG Novel: Phd1 down 1 44 YOR134W BAG7 GTPase activating protein (GAP) M[32] RGTTTTTCCG Novel: Phd1 down 1 43 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[32] RGTTTTTCCG Novel: Phd1 down 1 43 YHR194W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 43 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[32] RGTTTTTCCG Novel: Phd1 down 1 43 YCR076C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 42 YHR204W MNL1 M[32] RGTTTTTCCG Novel: Phd1 down 1 42 YJR074W MOG1 nuclear protein that interacts with GTP-Gsp1p M[32] RGTTTTTCCG Novel: Phd1 down 1 42 YER059W PCL6 PHO85 cyclin M[32] RGTTTTTCCG Novel: Phd1 down 1 42 YGL158W RCK1 Serine/threonine protein kinase M[32] RGTTTTTCCG Novel: Phd1 down 1 42 YER058W PET117 cytochrome c oxidase assembly factor M[32] RGTTTTTCCG Novel: Phd1 down 1 41 YNL263C YIF1 Similar to NADH dehydrogenases M[32] RGTTTTTCCG Novel: Phd1 down 1 41 YOR051C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 41 YOR312C RPL20B 60S ribosomal protein L20B (L18B) M[32] RGTTTTTCCG Novel: Phd1 down 1 41 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YLR262C-A Similar to C. elegans protein M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YLR396C VPS33 involved in vacuolar protein targeting M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YOL082W CVT19 CVT20 M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YBR239C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YMR198W CIK1 spindle pole body associated protein M[32] RGTTTTTCCG Novel: Phd1 down 1 40 YGR177C ATF2 Alcohol acetyltransferase M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YIL049W DFG10 involved in filamentous growth M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YLR412W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YLR390W ECM19 involved in cell wall biogenesis M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YMR308C PSE1 Karyopherin M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YMR307W GAS1 cell surface glycoprotein 115-120 kDa M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YMR273C ZDS1 peripheral plasma membrane protein M[32] RGTTTTTCCG Novel: Phd1 down 1 39 YHR205W SCH9 cAMP-dependent protein kinase homolog, suppressor of cdc25ts M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YMR016C SOK2 displays homologies to several transcription factors M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YOR337W TEA1 Ty1 enhancer activator M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YLL029W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YBL038W MRPL16 Mitochondrial ribosomal protein MRPL16 M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YLR401C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YGL099W LSG1 Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YCL011C GBP2 Protein with RNA recognition motifs M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YCL014W BUD3 involved in bud site selection M[32] RGTTTTTCCG Novel: Phd1 down 1 38 YOR373W NUD1 spindle pole body protein M[32] RGTTTTTCCG Novel: Phd1 down 1 37 YPL028W ERG10 acetoacetyl CoA thiolase M[32] RGTTTTTCCG Novel: Phd1 down 1 37 YER080W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 37 YBR043C AQR2 YBR043C M[32] RGTTTTTCCG Novel: Phd1 down 1 36 YER028C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 36 YKL214C YRA2 Yeast RNA Annealing protein M[32] RGTTTTTCCG Novel: Phd1 down 1 36 YLR248W RCK2 Serine/threonine protein kinase M[32] RGTTTTTCCG Novel: Phd1 down 1 36 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[32] RGTTTTTCCG Novel: Phd1 down 1 36 YER044C-A MEI4 mRNA is meiosis-specific and has 88 bp intron at 5' end spliced independently of MER1. M[32] RGTTTTTCCG Novel: Phd1 down 1 36 YAL024C LTE1 putative GTP-exchange protein M[32] RGTTTTTCCG Novel: Phd1 down 1 35 YOL110W SHR5 involved in RAS localization and palmitoylation M[32] RGTTTTTCCG Novel: Phd1 down 1 35 YDR456W NHX1 Na+/H+ exchanger M[32] RGTTTTTCCG Novel: Phd1 down 1 35 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[32] RGTTTTTCCG Novel: Phd1 down 1 35 YOR052C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 35 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[32] RGTTTTTCCG Novel: Phd1 down 1 35 YCR011C ADP1 Active transport ATPase M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YDR244W PEX5 69-kDa protein containing tetratricopeptide repeat (TPR) M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YKL059C MPE1 Protein required for cell viability M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YNL077W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YJR096W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YOL038W PRE6 alpha-type of subunit of 20S proteasome M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YMR252C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YMR251W-A HOR7 hyperosmolarity-responsive gene M[32] RGTTTTTCCG Novel: Phd1 down 1 34 YJR060W CBF1 basic helix-loop-helix protein M[32] RGTTTTTCCG Novel: Phd1 down 1 33 YOL066C RIB2 DRAP deaminase M[32] RGTTTTTCCG Novel: Phd1 down 1 33 YNL027W CRZ1 putative transcription factor M[32] RGTTTTTCCG Novel: Phd1 down 1 33 YGR161C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 33 YKL039W PTM1 Putative membrane protein M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YER103W SSA4 member of 70 kDa heat shock protein family M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YDR503C LPP1 Lipid phosphate phosphatase M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YOR033C EXO1 exonuclease M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YHR176W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YNL210W MER1 encodes protein with RNA-binding motifs required for MRE2-dependent mRNA splicing M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YHR008C SOD2 Manganese-containing superoxide dismutase M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YJR077C MIR1 Product of gene unknown M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YKR043C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YKR042W UTH1 involved in cell growth M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[32] RGTTTTTCCG Novel: Phd1 down 1 32 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[32] RGTTTTTCCG Novel: Phd1 down 1 31 YHR072W-A NOP10 Component of H/ACA-box snoRNPs M[32] RGTTTTTCCG Novel: Phd1 down 1 31 YPR151C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 31 YPR149W NCE102 Involved in secretion of proteins that lack classical secretory signal sequences M[32] RGTTTTTCCG Novel: Phd1 down 1 31 YCR030C Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 31 YKR041W Hypothetical ORF M[32] RGTTTTTCCG Novel: Phd1 down 1 30 YPL140C MKK2 protein kinase M[32] RGTTTTTCCG Novel: Phd1 down 1 30 YDR177W UBC1 ubiquitin-conjugating enzyme M[32] RGTTTTTCCG Novel: Phd1 down 1 30 YPR139C VPS66 M[32] RGTTTTTCCG Novel: Phd1 down 1 30 YHR178W STB5 Zinc finger (6-Cys) M[32] M[33] TTCTMGAAGA Known: Hsf1 down 2 105 YGR248W SOL4 similar to SOL3 M[33] TTCTMGAAGA Known: Hsf1 down 2 103 YGR093W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 2 85 YBR071W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 2 84 YCR023C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 2 83 YBR026C MRF1' Nuclear protein that binds to T-rich strand of core consensus sequence of autonomously replicating sequence M[33] TTCTMGAAGA Known: Hsf1 down 2 83 YJL157C FAR1 Cdc28p kinase inhibitor M[33] TTCTMGAAGA Known: Hsf1 down 2 80 YKL038W RGT1 transcriptional repressor and activator M[33] TTCTMGAAGA Known: Hsf1 down 1 62 YNL088W TOP2 topoisomerase II, Top2p localizes to axial cores in meiosis M[33] TTCTMGAAGA Known: Hsf1 down 1 61 YOL082W CVT19 CVT20 M[33] TTCTMGAAGA Known: Hsf1 down 1 60 YNL078W NIS1 Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 60 YOR337W TEA1 Ty1 enhancer activator M[33] TTCTMGAAGA Known: Hsf1 down 1 58 YNL161W CBK1 Protein kinase M[33] TTCTMGAAGA Known: Hsf1 down 1 56 YPL105C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 55 YCL049C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 54 YGR049W SCM4 suppressor of cdc4 mutations M[33] TTCTMGAAGA Known: Hsf1 down 1 51 YHR127W (H)igh copy (S)uppressor of (N)34 dominant negative allele of SEC4. Suppression is very specific to this allele. It has no affect on the analogous YPT1 allele. No homology or known function. M[33] TTCTMGAAGA Known: Hsf1 down 1 51 YGL189C RPS26A Ribosomal protein S26A M[33] TTCTMGAAGA Known: Hsf1 down 1 51 YDR213W UPC2 zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[33] TTCTMGAAGA Known: Hsf1 down 1 50 YNL282W POP3 RNase P and RNase MRP subunit M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YJR031C GEA1 GDP/GTP exchange factor M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YDL144C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YJL170C ASG7 An a-specific gene that is induced to a higher expression level by alpha factor M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YIR035C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YDR310C SUM1 nuclear protein involved in silencing M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YJL203W PRP21 RNA splicing factor M[33] TTCTMGAAGA Known: Hsf1 down 1 49 YHR049W FSH1 M[33] TTCTMGAAGA Known: Hsf1 down 1 48 YMR185W Protein required for cell viability M[33] TTCTMGAAGA Known: Hsf1 down 1 48 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[33] TTCTMGAAGA Known: Hsf1 down 1 47 YJR072C Protein required for cell viability M[33] TTCTMGAAGA Known: Hsf1 down 1 47 YKL186C MTR2 mRNA transport regulator M[33] TTCTMGAAGA Known: Hsf1 down 1 47 YLL023C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 46 YOR232W MGE1 GrpE homolog, mitochondrial matrix protein M[33] TTCTMGAAGA Known: Hsf1 down 1 46 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[33] TTCTMGAAGA Known: Hsf1 down 1 46 YHL022C SPO11 Encodes one of the earliest meiosis-specific recombination functions. M[33] TTCTMGAAGA Known: Hsf1 down 1 46 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YBR102C EXO84 Component of the exocyst complex; homolog in rat brain called rExo84. M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YBR175W SWD3 YBR175W M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YER025W GCD11 gamma subunit of translational initiation factor eIF-2 M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YER026C CHO1 phosphatidylserine synthase M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YKL068W NUP100 Nuclear pore complex protein homologous to Nup116p M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YIL142W CCT2 molecular chaperone M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YMR044W IOC4 ISWI One Complex M[33] TTCTMGAAGA Known: Hsf1 down 1 45 YMR047C NUP116 Nuclear pore complex protein that is member of GLFG repeat-containing family of nucleoporins and is highly homologous to Nup100p M[33] TTCTMGAAGA Known: Hsf1 down 1 44 YBR239C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 44 YLR401C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 44 YGR141W VPS62 M[33] TTCTMGAAGA Known: Hsf1 down 1 44 YPR074C TKL1 Transketolase 1 M[33] TTCTMGAAGA Known: Hsf1 down 1 44 YBR112C CYC8 Transcription regulatory protein M[33] TTCTMGAAGA Known: Hsf1 down 1 44 YOR361C PRT1 translation initiation factor eIF3 subunit M[33] TTCTMGAAGA Known: Hsf1 down 1 43 YDR305C HNT2 member of the histidine triad family M[33] TTCTMGAAGA Known: Hsf1 down 1 43 YER027C GAL83 glucose repression protein, a component of the Snf1 complex M[33] TTCTMGAAGA Known: Hsf1 down 1 43 YLR427W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 42 YDR322W MRPL35 Mitochondrial ribosomal protein MRPL35 (YmL35) M[33] TTCTMGAAGA Known: Hsf1 down 1 42 YDR322C-A TIM11 subunit e of mitochondrial F1F0-ATPase M[33] TTCTMGAAGA Known: Hsf1 down 1 42 YMR198W CIK1 spindle pole body associated protein M[33] TTCTMGAAGA Known: Hsf1 down 1 42 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[33] TTCTMGAAGA Known: Hsf1 down 1 41 YGR179C OKP1 Outer Kinetochore Protein M[33] TTCTMGAAGA Known: Hsf1 down 1 41 YPL262W FUM1 mitochondrial and cytoplasmic fumarase (fumarate hydralase) M[33] TTCTMGAAGA Known: Hsf1 down 1 41 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[33] TTCTMGAAGA Known: Hsf1 down 1 41 YMR093W UTP15 Protein required for cell viability M[33] TTCTMGAAGA Known: Hsf1 down 1 41 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[33] TTCTMGAAGA Known: Hsf1 down 1 40 YFL027C GYP8 Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 40 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YAL053W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YPR079W MRL1 M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YGR009C SEC9 Putative t-SNARE of the plasma membrane M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YEL041W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YCR018C SRD1 Transcription regulator M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YHR073W OSH3 Oxysterol Binding Protein M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[33] TTCTMGAAGA Known: Hsf1 down 1 39 YOR035C SHE4 Required for mother cell-specific HO expression M[33] TTCTMGAAGA Known: Hsf1 down 1 38 YMR251W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 38 YLL038C ENT4 Ent4p M[33] TTCTMGAAGA Known: Hsf1 down 1 38 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[33] TTCTMGAAGA Known: Hsf1 down 1 38 YGR013W SNU71 U1 snRNP protein M[33] TTCTMGAAGA Known: Hsf1 down 1 38 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[33] TTCTMGAAGA Known: Hsf1 down 1 38 YDL208W NHP2 HMG-like nuclear protein M[33] TTCTMGAAGA Known: Hsf1 down 1 37 YOR065W CYT1 Cytochrome c1 M[33] TTCTMGAAGA Known: Hsf1 down 1 37 YFL005W SEC4 Ras-like small GTP-binding protein M[33] TTCTMGAAGA Known: Hsf1 down 1 36 YBL072C RPS8A Ribosomal protein S8A (S14A) (rp19) (YS9) M[33] TTCTMGAAGA Known: Hsf1 down 1 36 YIR032C DAL3 ureidoglycolate hydrolase M[33] TTCTMGAAGA Known: Hsf1 down 1 36 YHR102W KIC1 PAK/Ste20 kinase family M[33] TTCTMGAAGA Known: Hsf1 down 1 36 YBR083W TEC1 transcription factor of the TEA/ATTS DNA-binding domain family, regulator of Ty1 expression M[33] TTCTMGAAGA Known: Hsf1 down 1 36 YLR262C-A Similar to C. elegans protein M[33] TTCTMGAAGA Known: Hsf1 down 1 36 YBR039W ATP3 gamma subunit of mitochondrial ATP synthase M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YDL019C OSH2 Oxysterol Binding Protein M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YKL129C MYO3 myosin I M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YPR139C VPS66 M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YNL190W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YLR249W YEF3 EF-3 (translational elongation factor 3) M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YGR098C ESP1 involved in regulation of spindle pole body duplication M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YGR097W ASK10 transcriptional activator of the SKN7 mediated 'two-component' regulatory system M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YHR008C SOD2 Manganese-containing superoxide dismutase M[33] TTCTMGAAGA Known: Hsf1 down 1 35 YEL042W GDA1 Guanosine diphosphatase of Golgi membrane M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YGL082W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YOR210W RPB10 RNA polymerase II subunit M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YOR211C MGM1 encodes protein with GTP-binding domain related to dynamin M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YAL017W FUN31 Serine/threonine kinase M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YBL049W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YBL047C EDE1 EH domain protein involved in endocytosis M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YOL033W MSE1 Mitochondrial glutamyl-tRNA synthetase M[33] TTCTMGAAGA Known: Hsf1 down 1 34 YOR310C NOP58 57 kDa nucleolar protein M[33] TTCTMGAAGA Known: Hsf1 down 1 33 YPL045W VPS16 Vacuolar sorting protein M[33] TTCTMGAAGA Known: Hsf1 down 1 33 YPL082C MOT1 putative helicase M[33] TTCTMGAAGA Known: Hsf1 down 1 33 YHR165C PRP8 U5 snRNP and spliceosome component M[33] TTCTMGAAGA Known: Hsf1 down 1 33 YJR122W CAF17 component of CCR4 transcriptional complex M[33] TTCTMGAAGA Known: Hsf1 down 1 33 YJR094C IME1 transcription factor involved in meiosis M[33] TTCTMGAAGA Known: Hsf1 down 1 33 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[33] TTCTMGAAGA Known: Hsf1 down 1 32 YHR003C Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 32 YHR002W LEU5 M[33] TTCTMGAAGA Known: Hsf1 down 1 32 YJR121W ATP2 F(1)F(0)-ATPase complex beta subunit, mitochondrial M[33] TTCTMGAAGA Known: Hsf1 down 1 32 YFL016C MDJ1 DnaJ homolog involved in mitochondrial biogenesis and protein folding M[33] TTCTMGAAGA Known: Hsf1 down 1 32 YHR177W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 31 YJR060W CBF1 basic helix-loop-helix protein M[33] TTCTMGAAGA Known: Hsf1 down 1 31 YBR288C APM3 clathrin associated protein medium chain M[33] TTCTMGAAGA Known: Hsf1 down 1 31 YBR287W Hypothetical ORF M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YJL194W CDC6 pre-initiation complex component M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YBR059C AKL1 Serine-threonine protein kinase M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YFR001W LOC1 Double-stranded RNA-binding protein M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YMR307W GAS1 cell surface glycoprotein 115-120 kDa M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YMR308C PSE1 Karyopherin M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[33] TTCTMGAAGA Known: Hsf1 down 1 30 YNL068C FKH2 Fork Head homolog two M[33] M[34] YCCGSGGS Known: Pdr1 down 2 75 YPL063W Protein required for cell viability M[34] YCCGSGGS Known: Pdr1 down 1 46 YOR371C KRH2 Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 46 YGR017W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 46 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[34] YCCGSGGS Known: Pdr1 down 1 45 YIL126W STH1 helicase related protein, snf2 homolog M[34] YCCGSGGS Known: Pdr1 down 1 45 YNL046W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 45 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[34] YCCGSGGS Known: Pdr1 down 1 45 YGR068C Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 44 YOL082W CVT19 CVT20 M[34] YCCGSGGS Known: Pdr1 down 1 41 YMR273C ZDS1 peripheral plasma membrane protein M[34] YCCGSGGS Known: Pdr1 down 1 41 YPR037C ERV2 M[34] YCCGSGGS Known: Pdr1 down 1 41 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[34] YCCGSGGS Known: Pdr1 down 1 36 YPR116W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 36 YMR043W MCM1 transcription factor containing the 56 amino-acid MADS (MCM1, AG, DEFAm SRF)-box motif within its DNA binding domain, plays a central role in the formation of both repressor and activator complexes M[34] YCCGSGGS Known: Pdr1 down 1 36 YJL151C SNA3 Small integral membrane protein M[34] YCCGSGGS Known: Pdr1 down 1 35 YBR222C FAT2 Probable AMP-binding protein M[34] YCCGSGGS Known: Pdr1 down 1 35 YOR051C Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 34 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[34] YCCGSGGS Known: Pdr1 down 1 33 YDR323C PEP7 cytosolic and peripheral membrane protein with three zinc fingers; cysteine rich regions of amino acids are essential for function M[34] YCCGSGGS Known: Pdr1 down 1 32 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[34] YCCGSGGS Known: Pdr1 down 1 32 YDL195W SEC31 Component (p150) of COPII coat of secretory pathway vesicles M[34] YCCGSGGS Known: Pdr1 down 1 32 YGR173W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 32 YGR174C CBP4 ubiquinol--cytochrome-c reductase assembly factor M[34] YCCGSGGS Known: Pdr1 down 1 32 YOL026C Protein required for cell viability M[34] YCCGSGGS Known: Pdr1 down 1 32 YGR016W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 32 YPR113W PIS1 phosphatidylinositol synthase M[34] YCCGSGGS Known: Pdr1 down 1 32 YPR159W KRE6 potential beta-glucan synthase M[34] YCCGSGGS Known: Pdr1 down 1 32 YJL083W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 32 YML058W-A HUG1 induced by DNA damage and replication arrest M[34] YCCGSGGS Known: Pdr1 down 1 32 YFR017C Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 32 YGR031W Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 31 YIL023C Hypothetical ORF M[34] YCCGSGGS Known: Pdr1 down 1 31 YNL161W CBK1 Protein kinase M[34] YCCGSGGS Known: Pdr1 down 1 31 YGR248W SOL4 similar to SOL3 M[34] M[35] C.CCTTTTATAC Novel: no cat down 2 93 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[35] C.CCTTTTATAC Novel: no cat down 1 69 YPR159W KRE6 potential beta-glucan synthase M[35] C.CCTTTTATAC Novel: no cat down 1 68 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[35] C.CCTTTTATAC Novel: no cat down 1 56 YML125C Protein required for cell viability M[35] C.CCTTTTATAC Novel: no cat down 1 55 YML058W-A HUG1 induced by DNA damage and replication arrest M[35] C.CCTTTTATAC Novel: no cat down 1 52 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[35] C.CCTTTTATAC Novel: no cat down 1 52 YMR185W Protein required for cell viability M[35] C.CCTTTTATAC Novel: no cat down 1 52 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[35] C.CCTTTTATAC Novel: no cat down 1 51 YJL061W NUP82 82-kDa protein, with putative coiled-coil domain, has carboxy-terminal domain, containing heptad repeats, that binds Nsp1p; nucleoporin M[35] C.CCTTTTATAC Novel: no cat down 1 51 YGR009C SEC9 Putative t-SNARE of the plasma membrane M[35] C.CCTTTTATAC Novel: no cat down 1 50 YOR033C EXO1 exonuclease M[35] C.CCTTTTATAC Novel: no cat down 1 50 YEL046C GLY1 Threonine Aldolase M[35] C.CCTTTTATAC Novel: no cat down 1 49 YHR182W Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 48 YOR178C GAC1 Regulatory subunit for Glc7p M[35] C.CCTTTTATAC Novel: no cat down 1 48 YIR032C DAL3 ureidoglycolate hydrolase M[35] C.CCTTTTATAC Novel: no cat down 1 48 YBL104C Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 48 YMR183C SSO2 post-Golgi t-SNARE M[35] C.CCTTTTATAC Novel: no cat down 1 47 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[35] C.CCTTTTATAC Novel: no cat down 1 47 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[35] C.CCTTTTATAC Novel: no cat down 1 46 YOR337W TEA1 Ty1 enhancer activator M[35] C.CCTTTTATAC Novel: no cat down 1 46 YER022W SRB4 subunit of RNA polymerase II holoenzyme/mediator complex M[35] C.CCTTTTATAC Novel: no cat down 1 46 YDL219W DTD1 D-Tyr-tRNA(Tyr) deacylase M[35] C.CCTTTTATAC Novel: no cat down 1 45 YDR432W NPL3 nuclear shuttling protein with an RNA recognition motif M[35] C.CCTTTTATAC Novel: no cat down 1 45 YJL149W Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 45 YDL195W SEC31 Component (p150) of COPII coat of secretory pathway vesicles M[35] C.CCTTTTATAC Novel: no cat down 1 45 YOR222W ODC2 M[35] C.CCTTTTATAC Novel: no cat down 1 44 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[35] C.CCTTTTATAC Novel: no cat down 1 44 YOR373W NUD1 spindle pole body protein M[35] C.CCTTTTATAC Novel: no cat down 1 43 YOL036W Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 43 YIL164C NIT1 nitrilase M[35] C.CCTTTTATAC Novel: no cat down 1 43 YOR179C Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 43 YPR093C Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 43 YKR048C NAP1 nucleosome assembly protein I M[35] C.CCTTTTATAC Novel: no cat down 1 43 YMR251W Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 43 YBL075C SSA3 heat-inducible cytosolic member of the 70 kDa heat shock protein family M[35] C.CCTTTTATAC Novel: no cat down 1 43 YHL020C OPI1 negative regulator of phospholipid biosynthesis M[35] C.CCTTTTATAC Novel: no cat down 1 43 YKL188C PXA2 peroxisomal ABC transporter 2 M[35] C.CCTTTTATAC Novel: no cat down 1 43 YKL189W HYM1 The homologue in Aspergillus nidulans, hymA, is involved in development, see Karos, M. and Fischer, R. (1996). hymA (hypha-like metulae), a new developmental mutant of Aspergillus nidulans. Microbiol. 142:3211-3218. M[35] C.CCTTTTATAC Novel: no cat down 1 42 YDL063C Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 42 YDL064W UBC9 ubiquitin-conjugating enzyme M[35] C.CCTTTTATAC Novel: no cat down 1 42 YMR178W Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 42 YBR086C IST2 Probable transmembrane protein M[35] C.CCTTTTATAC Novel: no cat down 1 41 YDR177W UBC1 ubiquitin-conjugating enzyme M[35] C.CCTTTTATAC Novel: no cat down 1 41 YLR390W ECM19 involved in cell wall biogenesis M[35] C.CCTTTTATAC Novel: no cat down 1 41 YOR054C Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 41 YHR122W Protein required for cell viability M[35] C.CCTTTTATAC Novel: no cat down 1 40 YGR100W MDR1 interacts with Mac1, a transcription factor that regulates genes involved in copper and iron utilization M[35] C.CCTTTTATAC Novel: no cat down 1 40 YNR051C BRE5 protein of unknown function M[35] C.CCTTTTATAC Novel: no cat down 1 38 YHR178W STB5 Zinc finger (6-Cys) M[35] C.CCTTTTATAC Novel: no cat down 1 37 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[35] C.CCTTTTATAC Novel: no cat down 1 37 YNL133C FYV6 Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 37 YOR012W Hypothetical ORF M[35] C.CCTTTTATAC Novel: no cat down 1 37 YER126C NSA2 M[35] C.CCTTTTATAC Novel: no cat down 1 37 YER125W RSP5 Rsp5p encodes a hect (homologous to E6-AP C terminus) and encodes a ubiquitin-protein ligase (E3 enzyme) M[35] C.CCTTTTATAC Novel: no cat down 1 37 YDL220C CDC13 binds to single-stranded TG1-3 telomere G-tails M[35] C.CCTTTTATAC Novel: no cat down 1 36 YHR142W CHS7 The seventh gene identified that is involved in chitin synthesis; involved in Chs3p export from the ER M[35] C.CCTTTTATAC Novel: no cat down 1 36 YJL018W Protein required for cell viability M[35] C.CCTTTTATAC Novel: no cat down 1 33 YPL029W SUV3 putative ATP-dependent helicase M[35] C.CCTTTTATAC Novel: no cat down 1 32 YKL186C MTR2 mRNA transport regulator M[35] C.CCTTTTATAC Novel: no cat down 1 32 YDL230W PTP1 phosphotyrosine-specific protein phosphatase M[35] M[36] .CCSGTA.CGG Known: Leu3 down 2 94 YGL008C PMA1 plasma membrane H+-ATPase M[36] .CCSGTA.CGG Known: Leu3 down 1 58 YOR107W RGS2 GTPase activating protein for Gpa2 M[36] .CCSGTA.CGG Known: Leu3 down 1 58 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[36] .CCSGTA.CGG Known: Leu3 down 1 58 YER158C Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 58 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[36] .CCSGTA.CGG Known: Leu3 down 1 58 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[36] .CCSGTA.CGG Known: Leu3 down 1 58 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[36] .CCSGTA.CGG Known: Leu3 down 1 57 YGL126W SCS3 involved in inositol biosynthesis M[36] .CCSGTA.CGG Known: Leu3 down 1 55 YNL066W SUN4 Protein involved in the aging process M[36] .CCSGTA.CGG Known: Leu3 down 1 45 YDR156W RPA14 RNA polymerase I subunit A14 M[36] .CCSGTA.CGG Known: Leu3 down 1 45 YMR099C Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 45 YNL191W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 45 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[36] .CCSGTA.CGG Known: Leu3 down 1 45 YDR059C UBC5 ubiquitin-conjugating enzyme M[36] .CCSGTA.CGG Known: Leu3 down 1 45 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[36] .CCSGTA.CGG Known: Leu3 down 1 44 YKL121W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 44 YHR025W THR1 homoserine kinase M[36] .CCSGTA.CGG Known: Leu3 down 1 43 YEL020C Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 43 YEL020W-A TIM9 mitochondrial inner membrane translocase M[36] .CCSGTA.CGG Known: Leu3 down 1 43 YPL176C Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 42 YCR073C SSK22 protein kinase M[36] .CCSGTA.CGG Known: Leu3 down 1 42 YHR064C SSZ1 Hsp70 Protein M[36] .CCSGTA.CGG Known: Leu3 down 1 41 YKR090W PXL1 Paxillin-like protein M[36] .CCSGTA.CGG Known: Leu3 down 1 41 YGR268C Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 41 YGR096W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 41 YKL098W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 40 YOR337W TEA1 Ty1 enhancer activator M[36] .CCSGTA.CGG Known: Leu3 down 1 40 YEL046C GLY1 Threonine Aldolase M[36] .CCSGTA.CGG Known: Leu3 down 1 39 YDL234C GYP7 GTPase-activating protein M[36] .CCSGTA.CGG Known: Leu3 down 1 38 YPR110C RPC40 RNA polymerase III (C) subunit M[36] .CCSGTA.CGG Known: Leu3 down 1 38 YPR109W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 38 YAL017W FUN31 Serine/threonine kinase M[36] .CCSGTA.CGG Known: Leu3 down 1 37 YGR049W SCM4 suppressor of cdc4 mutations M[36] .CCSGTA.CGG Known: Leu3 down 1 37 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[36] .CCSGTA.CGG Known: Leu3 down 1 37 YPL031C PHO85 cyclin-dependent protein kinase M[36] .CCSGTA.CGG Known: Leu3 down 1 35 YNR003C RPC34 34-kDa subunit of RNA polymerase III (C) M[36] .CCSGTA.CGG Known: Leu3 down 1 35 YGL058W RAD6 Ubiquitin conjugating (E2) enzyme. The C-terminal 23 residues are critical for sporulation and histone polyubiquitinating activity, but not UV repair or induced mutagenesis. M[36] .CCSGTA.CGG Known: Leu3 down 1 35 YGL057C Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 34 YKL069W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 34 YPR139C VPS66 M[36] .CCSGTA.CGG Known: Leu3 down 1 34 YGR013W SNU71 U1 snRNP protein M[36] .CCSGTA.CGG Known: Leu3 down 1 34 YPL222W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 34 YER096W SHC1 sporulation-specific homolog of csd4 M[36] .CCSGTA.CGG Known: Leu3 down 1 33 YNL209W SSB2 Heat shock protein of HSP70 family, homolog of SSB1 M[36] .CCSGTA.CGG Known: Leu3 down 1 32 YJL010C Protein required for cell viability M[36] .CCSGTA.CGG Known: Leu3 down 1 31 YDR444W Hypothetical ORF M[36] .CCSGTA.CGG Known: Leu3 down 1 31 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[36] .CCSGTA.CGG Known: Leu3 down 1 30 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[36] .CCSGTA.CGG Known: Leu3 down 1 30 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[36] .CCSGTA.CGG Known: Leu3 down 1 30 YDR076W RAD55 RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis M[36] M[37] SKTKCCTT Novel: Phd1 down 2 86 YKL029C MAE1 mitochondrial malic enzyme M[37] SKTKCCTT Novel: Phd1 down 2 77 YCR023C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 2 76 YGR059W SPR3 septin protein involved in sporulation M[37] SKTKCCTT Novel: Phd1 down 2 76 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[37] SKTKCCTT Novel: Phd1 down 2 73 YPR159W KRE6 potential beta-glucan synthase M[37] SKTKCCTT Novel: Phd1 down 2 63 YLR045C STU2 spindle pole body component M[37] SKTKCCTT Novel: Phd1 down 1 44 YOR033C EXO1 exonuclease M[37] SKTKCCTT Novel: Phd1 down 1 44 YER013W PRP22 helicase-like protein M[37] SKTKCCTT Novel: Phd1 down 1 44 YER065C ICL1 isocitrate lyase M[37] SKTKCCTT Novel: Phd1 down 1 44 YPR105C COD1 M[37] SKTKCCTT Novel: Phd1 down 1 44 YJL149W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 44 YPL068C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 44 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[37] SKTKCCTT Novel: Phd1 down 1 43 YGL192W IME4 mRNA methyltransferase (putative) M[37] SKTKCCTT Novel: Phd1 down 1 43 YBR067C TIP1 cell wall mannoprotein M[37] SKTKCCTT Novel: Phd1 down 1 43 YDR119W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 43 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[37] SKTKCCTT Novel: Phd1 down 1 43 YMR198W CIK1 spindle pole body associated protein M[37] SKTKCCTT Novel: Phd1 down 1 43 YDL079C MRK1 MDS1 related protein kinase M[37] SKTKCCTT Novel: Phd1 down 1 43 YDL019C OSH2 Oxysterol Binding Protein M[37] SKTKCCTT Novel: Phd1 down 1 43 YPL093W NOG1 (putative) nucleolar G-protein; homologs identified in human and Trypanosoma brucei M[37] SKTKCCTT Novel: Phd1 down 1 43 YPL031C PHO85 cyclin-dependent protein kinase M[37] SKTKCCTT Novel: Phd1 down 1 43 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[37] SKTKCCTT Novel: Phd1 down 1 43 YDL213C FYV14 Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 43 YGL048C RPT6 ATPase M[37] SKTKCCTT Novel: Phd1 down 1 43 YMR039C SUB1 transcriptional coactivator M[37] SKTKCCTT Novel: Phd1 down 1 43 YOR144C ELG1 Enhanced Frequency of Direct-repeat recombination M[37] SKTKCCTT Novel: Phd1 down 1 43 YLR257W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 43 YER140W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 43 YIL017C VID28 vacuole import and degradation M[37] SKTKCCTT Novel: Phd1 down 1 43 YIL018W RPL2B Ribosomal protein L2B (L5B) (rp8) (YL6) M[37] SKTKCCTT Novel: Phd1 down 1 42 YMR255W GFD1 GREAT for FULL DEAD box protein activity M[37] SKTKCCTT Novel: Phd1 down 1 42 YMR256C COX7 subunit VII of cytochrome c oxidase M[37] SKTKCCTT Novel: Phd1 down 1 42 YLL028W TPO1 polyamine transport protein M[37] SKTKCCTT Novel: Phd1 down 1 42 YGR248W SOL4 similar to SOL3 M[37] SKTKCCTT Novel: Phd1 down 1 41 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[37] SKTKCCTT Novel: Phd1 down 1 41 YGR145W Protein required for cell viability M[37] SKTKCCTT Novel: Phd1 down 1 41 YGR146C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 41 YML015C TAF11 TFIID subunit M[37] SKTKCCTT Novel: Phd1 down 1 41 YDR443C SSN2 transcription factor M[37] SKTKCCTT Novel: Phd1 down 1 41 YCL037C SRO9 RNA binding protein with La motif M[37] SKTKCCTT Novel: Phd1 down 1 40 YKR053C YSR3 DHS-1-P phosphatase M[37] SKTKCCTT Novel: Phd1 down 1 40 YNL016W PUB1 poly(A)+ RNA-binding protein M[37] SKTKCCTT Novel: Phd1 down 1 40 YER066W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 39 YMR321C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 39 YDR222W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 38 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[37] SKTKCCTT Novel: Phd1 down 1 38 YJR121W ATP2 F(1)F(0)-ATPase complex beta subunit, mitochondrial M[37] SKTKCCTT Novel: Phd1 down 1 37 YDL125C HNT1 similarity to protein kinase C inhibitor-I M[37] SKTKCCTT Novel: Phd1 down 1 36 YNL190W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 36 YKR019C IRS4 involved in rDNA silencing M[37] SKTKCCTT Novel: Phd1 down 1 36 YHR155W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 36 YHR156C LIN1 Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 36 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[37] SKTKCCTT Novel: Phd1 down 1 35 YOR138C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 35 YGL187C COX4 subunit IV of cytochrome c oxidase M[37] SKTKCCTT Novel: Phd1 down 1 35 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[37] SKTKCCTT Novel: Phd1 down 1 35 YJR125C ENT3 Ent3p M[37] SKTKCCTT Novel: Phd1 down 1 34 YKL171W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 34 YIL123W SIM1 (putative) invovled in control of DNA replication M[37] SKTKCCTT Novel: Phd1 down 1 34 YGR197C SNG1 involved in nitrosoguanidine resistance M[37] SKTKCCTT Novel: Phd1 down 1 34 YPL105C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 34 YER027C GAL83 glucose repression protein, a component of the Snf1 complex M[37] SKTKCCTT Novel: Phd1 down 1 33 YDR086C SSS1 endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex M[37] SKTKCCTT Novel: Phd1 down 1 33 YOL145C CTR9 involved in mitosis and chromosome segregation M[37] SKTKCCTT Novel: Phd1 down 1 33 YOL146W Protein required for cell viability M[37] SKTKCCTT Novel: Phd1 down 1 33 YER164W CHD1 transcriptional regulator M[37] SKTKCCTT Novel: Phd1 down 1 32 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[37] SKTKCCTT Novel: Phd1 down 1 32 YML016C PPZ1 serine-threonine phosphatase Z M[37] SKTKCCTT Novel: Phd1 down 1 32 YML017W PSP2 (putative) involved in mRNA splicing M[37] SKTKCCTT Novel: Phd1 down 1 32 YGR124W ASN2 asparagine synthetase M[37] SKTKCCTT Novel: Phd1 down 1 32 YML002W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 32 YOR222W ODC2 M[37] SKTKCCTT Novel: Phd1 down 1 32 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[37] SKTKCCTT Novel: Phd1 down 1 32 YDR214W AHA1 Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 32 YGR217W CCH1 putative calcium channel M[37] SKTKCCTT Novel: Phd1 down 1 32 YHL031C GOS1 Golgi SNARE protein M[37] SKTKCCTT Novel: Phd1 down 1 32 YLR287C Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 32 YPL039W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 32 YIL145C PAN6 M[37] SKTKCCTT Novel: Phd1 down 1 31 YOR112W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 31 YPR184W GDB1 Glycogen debranching enzyme M[37] SKTKCCTT Novel: Phd1 down 1 31 YKL043W PHD1 putative transcription factor M[37] SKTKCCTT Novel: Phd1 down 1 31 YMR160W Hypothetical ORF M[37] SKTKCCTT Novel: Phd1 down 1 31 YER044C-A MEI4 mRNA is meiosis-specific and has 88 bp intron at 5' end spliced independently of MER1. M[37] SKTKCCTT Novel: Phd1 down 1 31 YGR029W ERV1 involved in mitochondrial biogenesis M[37] SKTKCCTT Novel: Phd1 down 1 31 YPL255W BBP1 Involved in mitotic and meitoic cell cycle M[37] SKTKCCTT Novel: Phd1 down 1 31 YGR030C POP6 integral subunit of RNase P and apparent subunit of RNase MRP M[37] SKTKCCTT Novel: Phd1 down 1 31 YDR364C CDC40 Member of the beta transducin family M[37] SKTKCCTT Novel: Phd1 down 1 31 YDR363W-A SEM1 unknown function, similar to S. pombe Dss1 M[37] SKTKCCTT Novel: Phd1 down 1 30 YBR050C REG2 putative Glc7 regulatory subunit M[37] SKTKCCTT Novel: Phd1 down 1 30 YHR085W Protein required for cell viability M[37] SKTKCCTT Novel: Phd1 down 1 30 YMR017W SPO20 DBF2 Interacting Protein; SNAP 25 homolog M[37] M[38] CTCCCCTTAT Knonw: Msn2/4 down 3 116 YPR159W KRE6 potential beta-glucan synthase M[38] CTCCCCTTAT Knonw: Msn2/4 down 2 91 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[38] CTCCCCTTAT Knonw: Msn2/4 down 2 80 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[38] CTCCCCTTAT Knonw: Msn2/4 down 2 80 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[38] CTCCCCTTAT Knonw: Msn2/4 down 2 74 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[38] CTCCCCTTAT Knonw: Msn2/4 down 2 68 YNL161W CBK1 Protein kinase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 62 YOR056C NOB1 Protein required for cell viability M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 61 YCR060W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 54 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 54 YER158C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 54 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 53 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 53 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 53 YGL189C RPS26A Ribosomal protein S26A M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 53 YNL182C Protein required for cell viability M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 52 YDR447C RPS17B Ribosomal protein S17B (rp51B) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 52 YDR446W ECM11 (putative) involved in cell wall biogenesis M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 51 YER053C sequence similarity to mitochondrial phosphate transporters M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 50 YKL108W SLD2 Synthetically lethal with dpb11-1; required for DNA replication M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 50 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 47 YOR284W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 46 YPL222W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 44 YJL066C MPM1 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 44 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 44 YPR139C VPS66 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 44 YDR225W HTA1 Histone H2A (HTA1 and HTA2 code for nearly identical proteins) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 43 YMR014W BUD22 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 43 YMR015C ERG5 cytochrome P450 involved in C-22 denaturation of the ergosterol side-chain M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 43 YER096W SHC1 sporulation-specific homolog of csd4 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 42 YOR229W WTM2 Transcriptional modulator M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 42 YOR323C PRO2 gamma-glutamyl phosphate reductase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 42 YPL176C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 41 YJR095W SFC1 mitochondrial succinate-fumarate transport protein M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 41 YDL109C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 41 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 41 YOR201C PET56 Ribose methyltransferase for mitochondrial 21S rRNA M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 41 YGL228W SHE10 lethal when overexpressed M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YKL205W LOS1 nuclear protein LOS1 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YOR373W NUD1 spindle pole body protein M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YGL236C MTO1 Mitochondrial Translation Optimization; Strong similarity to E. coli GidA M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YOR112W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YDR432W NPL3 nuclear shuttling protein with an RNA recognition motif M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YJL163C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 40 YIL145C PAN6 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YPL184C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YDR119W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YKL045W PRI2 p58 polypeptide of DNA primase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YER080W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YJL083W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YJL099W CHS6 involved in chitin biosynthesis M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YBR213W MET8 Effector in the expression of PAPS reductase and sulfite reductase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YMR314W PRE5 alpha-type of subunit of 20S proteasome M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YPL088W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 39 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 38 YER126C NSA2 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 38 YER125W RSP5 Rsp5p encodes a hect (homologous to E6-AP C terminus) and encodes a ubiquitin-protein ligase (E3 enzyme) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 38 YCR011C ADP1 Active transport ATPase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 38 YPR184W GDB1 Glycogen debranching enzyme M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 38 YKL099C UTP11 Protein required for cell viability M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 38 YJL109C UTP10 Protein required for cell viability M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YDL019C OSH2 Oxysterol Binding Protein M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YMR080C NAM7 putative helicase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YMR079W SEC14 phosphatidylinositol transfer protein M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YDR177W UBC1 ubiquitin-conjugating enzyme M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YDR222W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YNL218W MGS1 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YNL230C ELA1 elongin A M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YER055C HIS1 ATP phosphoribosyltransferase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 37 YDR506C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YDR444W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YJL010C Protein required for cell viability M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YDL220C CDC13 binds to single-stranded TG1-3 telomere G-tails M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YNL288W CAF40 CCR4 Associated Factor 40 kDa M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YGR096W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 36 YDL044C MTF2 involved in mRNA splicing M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 35 YKL038W RGT1 transcriptional repressor and activator M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 35 YLR291C GCD7 translation initiation factor eIF2b, 43 kDa subunit; negative regulator of GCN4 expression M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 35 YER178W PDA1 alpha subunit of pyruvate dehydrogenase (E1 alpha) M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 35 YBR141C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 35 YOL012C HTZ1 An evolutionarily conserved member of the histone H2A F/Z family of histone variants M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 35 YGL186C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 34 YPL180W SHD7 Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 34 YKL192C ACP1 mitochondrial acyl carrier protein M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 34 YPR152C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 34 YGR237C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 34 YDR248C Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 34 YDR247W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 33 YNL191W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 33 YMR043W MCM1 transcription factor containing the 56 amino-acid MADS (MCM1, AG, DEFAm SRF)-box motif within its DNA binding domain, plays a central role in the formation of both repressor and activator complexes M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 33 YPR125W Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 32 YBL076C ILS1 cytoplasmic isoleucyl-tRNA synthetase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 32 YPR183W DPM1 dolichol phosphate mannose synthase M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 31 YML071C DOR1 Hypothetical ORF M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 31 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[38] CTCCCCTTAT Knonw: Msn2/4 down 1 30 YPL179W PPQ1 protein phosphatase Q M[38] M[39] GCCCGG Novel: SOK2 (hits tRNA) down 2 72 YPL063W Protein required for cell viability M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 42 YJR127C ZMS1 Product of gene unknown M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 42 YDL019C OSH2 Oxysterol Binding Protein M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 42 YOL104C NDJ1 involved in meiotic chromosome segregation M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 42 YDR030C RAD28 involved in DNA repair, has WD repeats M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 42 YDR098C GRX3 Protein with glutaredoxin activity M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YGR173W Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YGR174C CBP4 ubiquinol--cytochrome-c reductase assembly factor M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YDR310C SUM1 nuclear protein involved in silencing M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YJR051W OSM1 osmotic growth protein M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YPL155C KIP2 kinesin-related protein M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YGR112W SHY1 mitochondrial protein with homology to the mammalian SURF-1 gene M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YPR159W KRE6 potential beta-glucan synthase M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YFR017C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 41 YKR041W Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 40 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 39 YPL127C HHO1 histone H1 M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 39 YER014W HEM14 protoporphyrinogen oxidase M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 38 YKL098W Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 38 YHR008C SOD2 Manganese-containing superoxide dismutase M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 38 YJR017C ESS1 Peptidyl-prolyl cis/trans isomerase (PPIase) M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 38 YOR373W NUD1 spindle pole body protein M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 38 YBR052C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 38 YGL008C PMA1 plasma membrane H+-ATPase M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 37 YML125C Protein required for cell viability M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 36 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 35 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 35 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 34 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 34 YLL029W Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 34 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YDR295C PLO2 Ploidy-related M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YOR229W WTM2 Transcriptional modulator M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YGR133W PEX4 Member of ubiquitin-conjugating protein family M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YBR281C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YNL101W Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YJL089W SIP4 shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region; lexA-Sip4p activates transcription M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 32 YNL195C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YLR094C GIS3 GIG3 suppressor M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YER029C SMB1 U1 snRNP protein M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YER177W BMH1 Homolog of mammalian 14-3-3 proteins M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YPL176C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YDR391C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YEL020C Hypothetical ORF M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YEL020W-A TIM9 mitochondrial inner membrane translocase M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YIL073C SPO22 meiosis-specific phospholipase A2 homolog M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YNL016W PUB1 poly(A)+ RNA-binding protein M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YIL049W DFG10 involved in filamentous growth M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 31 YIR009W MSL1 encodes YU2B, a component of yeast U2 snRNP M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 30 YOL038W PRE6 alpha-type of subunit of 20S proteasome M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 30 YGR049W SCM4 suppressor of cdc4 mutations M[39] GCCCGG Novel: SOK2 (hits tRNA) down 1 30 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[39] M[40] SGCGCGRB. Novel: No cat down 2 61 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[40] SGCGCGRB. Novel: No cat down 2 61 YNL200C Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 44 YGR277C Protein required for cell viability M[40] SGCGCGRB. Novel: No cat down 1 44 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[40] SGCGCGRB. Novel: No cat down 1 44 YNL092W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 44 YGL228W SHE10 lethal when overexpressed M[40] SGCGCGRB. Novel: No cat down 1 44 YOR337W TEA1 Ty1 enhancer activator M[40] SGCGCGRB. Novel: No cat down 1 44 YHR009C Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 44 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[40] SGCGCGRB. Novel: No cat down 1 44 YMR084W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 43 YER034W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 43 YKL029C MAE1 mitochondrial malic enzyme M[40] SGCGCGRB. Novel: No cat down 1 43 YDR246W TRS23 TRAPP subunit of 23 kDa M[40] SGCGCGRB. Novel: No cat down 1 43 YNL133C FYV6 Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 43 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[40] SGCGCGRB. Novel: No cat down 1 43 YMR198W CIK1 spindle pole body associated protein M[40] SGCGCGRB. Novel: No cat down 1 43 YER176W ECM32 DNA Helicase I M[40] SGCGCGRB. Novel: No cat down 1 40 YDR393W SHE9 similar to Arabidopsis Cip1, lethal when overexpressed M[40] SGCGCGRB. Novel: No cat down 1 40 YDR310C SUM1 nuclear protein involved in silencing M[40] SGCGCGRB. Novel: No cat down 1 40 YOR033C EXO1 exonuclease M[40] SGCGCGRB. Novel: No cat down 1 38 YIL146C ECM37 (putative) involved in cell wall biogenesis M[40] SGCGCGRB. Novel: No cat down 1 37 YIL150C DNA43 (putative) involved in DNA replication M[40] SGCGCGRB. Novel: No cat down 1 35 YGR068C Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 34 YPR124W CTR1 Copper transport protein M[40] SGCGCGRB. Novel: No cat down 1 34 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[40] SGCGCGRB. Novel: No cat down 1 34 YFL024C EPL1 Probable chromatin protein because of homology to Drosophila Enahncer of Polycomb M[40] SGCGCGRB. Novel: No cat down 1 33 YFR033C QCR6 ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa) M[40] SGCGCGRB. Novel: No cat down 1 33 YPL220W RPL1A Ribosomal protein L1A, forms part of the 60S ribosomal subunit M[40] SGCGCGRB. Novel: No cat down 1 33 YPL063W Protein required for cell viability M[40] SGCGCGRB. Novel: No cat down 1 32 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[40] SGCGCGRB. Novel: No cat down 1 31 YMR107W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 31 YJL118W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 31 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[40] SGCGCGRB. Novel: No cat down 1 31 YMR276W DSK2 ubiquitin-like protein M[40] SGCGCGRB. Novel: No cat down 1 30 YKL127W PGM1 phosphoglucomutase, minor isoform M[40] SGCGCGRB. Novel: No cat down 1 30 YBR083W TEC1 transcription factor of the TEA/ATTS DNA-binding domain family, regulator of Ty1 expression M[40] SGCGCGRB. Novel: No cat down 1 30 YLR356W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 30 YNL007C SIS1 sit4 suppressor, dnaJ homolog M[40] SGCGCGRB. Novel: No cat down 1 30 YDL103C QRI1 UDP-N-acetylglucosamine pyrophosphorylase M[40] SGCGCGRB. Novel: No cat down 1 30 YHR162W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 30 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[40] SGCGCGRB. Novel: No cat down 1 30 YNL234W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 30 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[40] SGCGCGRB. Novel: No cat down 1 30 YHR105W Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 30 YDR482C CWC21 YDR482C M[40] SGCGCGRB. Novel: No cat down 1 30 YPR145W ASN1 asparagine synthetase M[40] SGCGCGRB. Novel: No cat down 1 30 YPR147C Hypothetical ORF M[40] SGCGCGRB. Novel: No cat down 1 30 YDR408C ADE8 glycinamide ribotide transformylase M[40] SGCGCGRB. Novel: No cat down 1 30 YMR147W Hypothetical ORF M[40] M[41] CTCSGCS Novel: No cat down 1 43 YMR219W ESC1 involved in silencing M[41] CTCSGCS Novel: No cat down 1 42 YKR010C TOF2 topoisomerase I interacting factor 2 M[41] CTCSGCS Novel: No cat down 1 42 YMR099C Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[41] CTCSGCS Novel: No cat down 1 42 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[41] CTCSGCS Novel: No cat down 1 42 YMR301C ATM1 mitochondrial ABC transporter protein M[41] CTCSGCS Novel: No cat down 1 42 YMR102C Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YER048C CAJ1 homologous to E. coli DnaJ M[41] CTCSGCS Novel: No cat down 1 42 YDR323C PEP7 cytosolic and peripheral membrane protein with three zinc fingers; cysteine rich regions of amino acids are essential for function M[41] CTCSGCS Novel: No cat down 1 42 YLR357W RSC2 Member of RSC complex. M[41] CTCSGCS Novel: No cat down 1 42 YOL132W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YGR016W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YBR250W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YNL279W PRM1 pheromone-regulated membrane protein M[41] CTCSGCS Novel: No cat down 1 42 YER014W HEM14 protoporphyrinogen oxidase M[41] CTCSGCS Novel: No cat down 1 42 YPL201C Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YNR004W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YDR221W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[41] CTCSGCS Novel: No cat down 1 42 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[41] CTCSGCS Novel: No cat down 1 42 YBR136W MEC1 similar to phosphatidylinositol(PI)3-kinases required for DNA damage induced checkpoint responses in G1, S/M, intra S, and G2/M in mitosis M[41] CTCSGCS Novel: No cat down 1 42 YDR059C UBC5 ubiquitin-conjugating enzyme M[41] CTCSGCS Novel: No cat down 1 42 YPR008W HAA1 Homolog of Ace1 Activator M[41] CTCSGCS Novel: No cat down 1 42 YIL024C Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 42 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[41] CTCSGCS Novel: No cat down 1 42 YPL040C ISM1 nuclear encoded mitochondrial isoleucyl-tRNA synthetase M[41] CTCSGCS Novel: No cat down 1 41 YKL086W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 41 YPL222W Hypothetical ORF M[41] CTCSGCS Novel: No cat down 1 39 YKL038W RGT1 transcriptional repressor and activator M[41] CTCSGCS Novel: No cat down 1 36 YPR074C TKL1 Transketolase 1 M[41] CTCSGCS Novel: No cat down 1 35 YLL028W TPO1 polyamine transport protein M[41] CTCSGCS Novel: No cat down 1 32 YGL100W SEH1 nuclear pore protein M[41] CTCSGCS Novel: No cat down 1 31 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[41] CTCSGCS Novel: No cat down 1 31 YOR134W BAG7 GTPase activating protein (GAP) M[41] CTCSGCS Novel: No cat down 1 31 YML058W-A HUG1 induced by DNA damage and replication arrest M[41] M[42] TG.KAGCGCCG down 2 94 YPL063W Protein required for cell viability M[42] TG.KAGCGCCG down 2 89 YDR091C RLI1 putative member of nontransporter group of ATP-binding cassette (ABC) superfamily M[42] TG.KAGCGCCG down 1 65 YCL037C SRO9 RNA binding protein with La motif M[42] TG.KAGCGCCG down 1 64 YPR183W DPM1 dolichol phosphate mannose synthase M[42] TG.KAGCGCCG down 1 63 YMR251W Hypothetical ORF M[42] TG.KAGCGCCG down 1 61 YHR139C SPS100 sporulation-specific wall maturation protein M[42] TG.KAGCGCCG down 1 60 YBL074C AAR2 MATa1-mRNA splicing factor M[42] TG.KAGCGCCG down 1 58 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[42] TG.KAGCGCCG down 1 54 YML053C Hypothetical ORF M[42] TG.KAGCGCCG down 1 51 YPR157W Hypothetical ORF M[42] TG.KAGCGCCG down 1 51 YPR105C COD1 M[42] TG.KAGCGCCG down 1 50 YLR445W Hypothetical ORF M[42] TG.KAGCGCCG down 1 50 YDL213C FYV14 Hypothetical ORF M[42] TG.KAGCGCCG down 1 48 YPL163C SVS1 Serine and threonine rich protein. M[42] TG.KAGCGCCG down 1 44 YKL038W RGT1 transcriptional repressor and activator M[42] TG.KAGCGCCG down 1 43 YKR020W WHI6 M[42] TG.KAGCGCCG down 1 41 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[42] TG.KAGCGCCG down 1 41 YKR010C TOF2 topoisomerase I interacting factor 2 M[42] TG.KAGCGCCG down 1 38 YJL128C PBS2 MAP kinase kinase (MEK), may act as a scaffolding protein for Sho1p, Ste11p, and Hog1p M[42] TG.KAGCGCCG down 1 38 YLR380W CSR1 chs5 spa2 rescue; isolated as a multicopy suppressor of the lethality of chs5 spa2 double mutant at 37 degrees. M[42] TG.KAGCGCCG down 1 38 YLL051C FRE6 similar to FRE2 M[42] TG.KAGCGCCG down 1 37 YOR054C Hypothetical ORF M[42] TG.KAGCGCCG down 1 35 YGR156W PTI1 M[42] TG.KAGCGCCG down 1 35 YDL076C Hypothetical ORF M[42] TG.KAGCGCCG down 1 33 YNR017W MAS6 23 kDa mitochondrial inner membrane protein M[42] TG.KAGCGCCG down 1 32 YHL010C Hypothetical ORF M[42] TG.KAGCGCCG down 1 31 YBR133C HSL7 regulator of Swe1p kinase M[42] TG.KAGCGCCG down 1 30 YLR095C IOC2 ISWI One Complex M[42] M[43] ATGACTCWT Known: Gcn4/Bas1 down 3 129 YOL059W GPD2 Glycerol-3-phosphate dehydrogenase (NAD+) M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 96 YIR035C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 86 YER068W MOT2 putative zinc finger protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 84 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 83 YOR129C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 83 YBR249C ARO4 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase isoenzyme M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 83 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 81 YGL183C MND1 M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 81 YLR307W CDA1 Chitin Deacetylase M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 81 YCL029C BIK1 Microtubule-binding protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 76 YGL025C PGD1 RNA polymerase II mediator subunit M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 71 YFL005W SEC4 Ras-like small GTP-binding protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 65 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 64 YPL210C SRP72 component of signal recognition particle M[43] ATGACTCWT Known: Gcn4/Bas1 down 2 64 YPL211W NIP7 involved in ribosome biogenesis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 55 YBL075C SSA3 heat-inducible cytosolic member of the 70 kDa heat shock protein family M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 54 YBR044C TCM62 mitochondrial protein; (putative) chaperone M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 54 YDR444W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 54 YJL010C Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 53 YOL093W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 50 YNL315C ATP11 F1FO ATPase assembly protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 50 YGR203W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 49 YLR059C REX2 RNA exonuclease M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 46 YGL115W SNF4 associates with Snf1p M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 45 YGL106W MLC1 light chain for myosin Myo2p M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 45 YOR112W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 44 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YER053C sequence similarity to mitochondrial phosphate transporters M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YLR277C YSH1 subunit of Polyadenylation factor I (PF I) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YLR049C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YLR048W RPS0B Ribosomal protein S0B M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YIL003W DRE3 Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YIL002C INP51 phosphatidylinositol 4,5-bisphosphate 5-phosphatase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YLR056W ERG3 C-5 sterol desaturase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 43 YPR093C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YGR268C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YGL063W PUS2 pseudouridine synthase 2 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YNL182C Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YGR093W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YJR017C ESS1 Peptidyl-prolyl cis/trans isomerase (PPIase) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 42 YGL073W HSF1 heat shock transcription factor M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 41 YIL093C RSM25 mitochondrial ribosome small subunit component M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 41 YCR024C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 41 YKL034W TUL1 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 41 YOR229W WTM2 Transcriptional modulator M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 41 YPL263C KEL3 Kelch-repeat protein, similar to Kel1 and Kel2 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YPR008W HAA1 Homolog of Ace1 Activator M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YDL197C ASF2 Anti-silencing protein, involved in transcription M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YKR020W WHI6 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YMR301C ATM1 mitochondrial ABC transporter protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YPL176C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YOR107W RGS2 GTPase activating protein for Gpa2 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YDR363W ESC2 establishes silent chromatin M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 40 YDL144C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YDR156W RPA14 RNA polymerase I subunit A14 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YBR240C THI2 Probable Zn-finger protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YOL086C ADH1 Alcohol dehydrogenase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YOL086W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YHL010C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YPL230W Up in StarVation M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YBL087C RPL23A Ribosomal protein L23A (L17aA) (YL32) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YJL089W SIP4 shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region; lexA-Sip4p activates transcription M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YMR107W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YOR185C GSP2 GTP binding protein, almost identical to Gsp1p M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 39 YOR184W SER1 phosphoserine transaminase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YOL047C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YGL254W FZF1 putative transcription factor, has five zinc fingers M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YGL181W GTS1 Glycine-threonine-serine repeat protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YGL185C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YLL046C RNP1 ribonucleoprotein 1 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YER023W PRO3 delta 1-pyrroline-5-carboxylate reductase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YMR058W FET3 multicopper oxidase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YKL081W TEF4 Translation elongation factor EF-1gamma M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YOL036W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YGR145W Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YGR146C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YPL097W MSY1 Tyrosyl-tRNA synthetase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YKL172W EBP2 Nucleolar protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 38 YER080W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YAL041W CDC24 Guanine nucleotide exchange factor (a.k.a. GDP-release factor) for cdc42 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YAL040C CLN3 G(sub)1 cyclin M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YAL038W CDC19 Pyruvate kinase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YJL141C YAK1 Serine-threonine protein kinase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YJL143W TIM17 16.5 kDa inner membrane protein required for import of mitochondrial precursor proteins M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YNL201C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YNL202W SPS19 peroxisomal 2,4-dienoyl-CoA reductase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YER006W NUG1 Nuclear GTPase involved in Ribosome biogenesis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YBR146W MRPS9 Probable mitochondrial ribosomal protein S9 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YNR051C BRE5 protein of unknown function M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YIR022W SEC11 signal peptidase subunit M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 37 YDR488C PAC11 similar to rat dynein intermediate chain M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YMR147W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YKL185W ASH1 probable purine nucleotide-binding protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YMR243C ZRC1 involved in zinc and cadmium ion homeostasis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YNL310C Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YHR019C DED81 Asparaginyl-tRNA synthetase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YKL209C STE6 ABC transporter, glycoprotein, component of a-factor secretory pathway M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YKL210W UBA1 ubiquitin activating enzyme, similar to Uba2p M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YOL120C RPL18A Ribosomal protein L18A (rp28A) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YCR005C CIT2 non-mitochondrial citrate synthase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 36 YHR030C SLT2 serine/threonine MAP kinase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YNL227C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YLL028W TPO1 polyamine transport protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YGL099W LSG1 Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YMR139W RIM11 Serine/threonine protein kinase, phosphorylates the mitotic activator IME1 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YPL140C MKK2 protein kinase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YBL091C MAP2 methionine aminopeptidase 2 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YDR447C RPS17B Ribosomal protein S17B (rp51B) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YDR446W ECM11 (putative) involved in cell wall biogenesis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YER090W TRP2 anthranilate synthase Component I M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YER091C MET6 vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YMR063W RIM9 involved in sporulation M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YJL107C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 35 YDR353W TRR1 Thioredoxin reductase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YPL250C ICY2 interacting with the cytoskeleton M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YJR077C MIR1 Product of gene unknown M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YAL027W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YAL026C DRS2 Membrane-spanning Ca-ATPase (P-type),member of the cation transport (E1-E2) ATPases M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YOR336W KRE5 involved in cell wall biogenesis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YDR126W PSL10 Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YLR190W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YFL024C EPL1 Probable chromatin protein because of homology to Drosophila Enahncer of Polycomb M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YER164W CHD1 transcriptional regulator M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YGR096W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YOL026C Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YGL117W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YPL036W PMA2 plasma membrane ATPase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YNL085W MKT1 retroviral protease signature protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 34 YNL084C END3 Required for endocytosis and organization of the cytoskeleton M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YDR222W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YNL066W SUN4 Protein involved in the aging process M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YPR005C HAL1 polar 32k Da cytoplasmic protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YHR065C RRP3 RRP3 is a DEAD box gene homologous to eIF-4a which encodes an RNA-dependent ATPase possessing helicase activity which is not specific for RNA M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YBR107C IML3 weakly similar to chitin synthases, involved in chromosomal segregation and mitosis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YBR106W PHO88 regulator of Pho81, involved in regulating phosphate transport M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YLR450W HMG2 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YOL045W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YJL110C GZF3 GATA zinc finger protein 3 homologous to Dal80 in structure and function M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YJL111W CCT7 Component of Chaperonin Containing T-complex subunit seven M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 33 YNL153C GIM3 bovine prefoldin subunit 4 homolog (putative) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YGR029W ERV1 involved in mitochondrial biogenesis M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YGR030C POP6 integral subunit of RNase P and apparent subunit of RNase MRP M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YLR007W Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YLR008C Protein required for cell viability M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YKL073W LHS1 novel member of the Hsp70 family of molecular chaperones that localizes to the lumen of the endoplasmic reticulum: M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YNL024C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YOR298C-A MBF1 multiprotein bridging factor M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YOR298W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YGR008C STF2 ATPase stabilizing factor M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YGR007W MUQ1 choline phosphate cytidylyltransferase (also called phosphoethanolamine cytidylyltransferase or phosphocholine cytidylyltransferase) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YOL033W MSE1 Mitochondrial glutamyl-tRNA synthetase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YBR222C FAT2 Probable AMP-binding protein M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YOR176W HEM15 ferrochelatase (protoheme ferrolyase) M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YOR177C MPC54 YOR177c M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 32 YPR184W GDB1 Glycogen debranching enzyme M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YNL159C ASI2 M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YNL160W YGP1 YGP1 encodes gp37, a glycoprotein synthesized in response to nutrient limitation which is homologous to the sporulation-specific SPS100 gene M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YPR145W ASN1 asparagine synthetase M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YPR147C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YHR119W SET1 trithorax M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YPL098C Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YLR423C APG17 involved in autophagy M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YLR422W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 31 YDL186W Hypothetical ORF M[43] ATGACTCWT Known: Gcn4/Bas1 down 1 30 YJL184W Hypothetical ORF M[43] M[44] CCGA...TCGG Novel: Facilitators palindrome down 3 135 YOR134W BAG7 GTPase activating protein (GAP) M[44] CCGA...TCGG Novel: Facilitators palindrome down 2 99 YLL028W TPO1 polyamine transport protein M[44] CCGA...TCGG Novel: Facilitators palindrome down 2 81 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 54 YGR240C PFK1 phosphofructokinase alpha subunit M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 54 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 44 YPL201C Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 41 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 41 YER048C CAJ1 homologous to E. coli DnaJ M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 41 YKL086W Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 41 YOR054C Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 40 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 40 YKR002W PAP1 poly(A) polymerase M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 38 YPR151C Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 38 YPR149W NCE102 Involved in secretion of proteins that lack classical secretory signal sequences M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 37 YLL029W Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 37 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 36 YMR104C YPK2 protein kinase M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 36 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 36 YPL133C RDS2 Transcriptional regulator M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 35 YBR241C Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 35 YDL139C SCM3 Suppressor of chromosome missegregation M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 34 YPL176C Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 34 YDR155C CPR1 cyclophilin peptidyl-prolyl cis-trans isomerase M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 34 YJL157C FAR1 Cdc28p kinase inhibitor M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 34 YGR100W MDR1 interacts with Mac1, a transcription factor that regulates genes involved in copper and iron utilization M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 32 YHR205W SCH9 cAMP-dependent protein kinase homolog, suppressor of cdc25ts M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 32 YGR249W MGA1 Mga1p shows similarity to heat shock transcription factor M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 32 YGR250C Hypothetical ORF M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 32 YDR073W SNF11 component of SWI/SNF global transcription activator complex M[44] CCGA...TCGG Novel: Facilitators palindrome down 1 31 YPR015C Hypothetical ORF M[44] M[45] .SCGM......KCG. Novel: No cat down 1 39 YJL102W MEF2 mitochondrial elongation factor G-like protein M[45] .SCGM......KCG. Novel: No cat down 1 39 YJL101C GSH1 gamma-glutamylcysteine synthetase M[45] .SCGM......KCG. Novel: No cat down 1 39 YOR201C PET56 Ribose methyltransferase for mitochondrial 21S rRNA M[45] .SCGM......KCG. Novel: No cat down 1 39 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[45] .SCGM......KCG. Novel: No cat down 1 39 YNR054C Protein required for cell viability M[45] .SCGM......KCG. Novel: No cat down 1 39 YNL113W RPC19 subunit common to RNA polymerases I (A) and III (C) M[45] .SCGM......KCG. Novel: No cat down 1 39 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[45] .SCGM......KCG. Novel: No cat down 1 39 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[45] .SCGM......KCG. Novel: No cat down 1 39 YDR087C RRP1 involved in rRNA processing M[45] .SCGM......KCG. Novel: No cat down 1 39 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[45] .SCGM......KCG. Novel: No cat down 1 39 YDR119W Hypothetical ORF M[45] .SCGM......KCG. Novel: No cat down 1 39 YJR044C VPS55 YJR044c M[45] .SCGM......KCG. Novel: No cat down 1 39 YPL268W PLC1 phosphoinositide-specific phospholipase C M[45] .SCGM......KCG. Novel: No cat down 1 39 YKL086W Hypothetical ORF M[45] .SCGM......KCG. Novel: No cat down 1 39 YIL037C PRM2 M[45] .SCGM......KCG. Novel: No cat down 1 38 YNL270C ALP1 Basic amino acid permease M[45] .SCGM......KCG. Novel: No cat down 1 38 YLR401C Hypothetical ORF M[45] .SCGM......KCG. Novel: No cat down 1 38 YLR074C BUD20 M[45] .SCGM......KCG. Novel: No cat down 1 38 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[45] .SCGM......KCG. Novel: No cat down 1 38 YDR482C CWC21 YDR482C M[45] .SCGM......KCG. Novel: No cat down 1 37 YPR145W ASN1 asparagine synthetase M[45] .SCGM......KCG. Novel: No cat down 1 37 YPR147C Hypothetical ORF M[45] .SCGM......KCG. Novel: No cat down 1 37 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[45] .SCGM......KCG. Novel: No cat down 1 37 YMR251W Hypothetical ORF M[45] .SCGM......KCG. Novel: No cat down 1 35 YEL066W HPA3 histone acetyltransferase complex subunit M[45] .SCGM......KCG. Novel: No cat down 1 35 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[45] .SCGM......KCG. Novel: No cat down 1 35 YPR139C VPS66 M[45] .SCGM......KCG. Novel: No cat down 1 33 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[45] .SCGM......KCG. Novel: No cat down 1 33 YPL191C Hypothetical ORF M[45] .SCGM......KCG. Novel: No cat down 1 33 YJR031C GEA1 GDP/GTP exchange factor M[45] .SCGM......KCG. Novel: No cat down 1 32 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[45] M[46] C.CCGCGC..TTTs Novel: No cat down 2 101 YJR044C VPS55 YJR044c M[46] C.CCGCGC..TTTs Novel: No cat down 2 78 YOR337W TEA1 Ty1 enhancer activator M[46] C.CCGCGC..TTTs Novel: No cat down 1 69 YLR401C Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 56 YGR054W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 56 YMR301C ATM1 mitochondrial ABC transporter protein M[46] C.CCGCGC..TTTs Novel: No cat down 1 55 YMR251W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 55 YHR177W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 49 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[46] C.CCGCGC..TTTs Novel: No cat down 1 49 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[46] C.CCGCGC..TTTs Novel: No cat down 1 49 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[46] C.CCGCGC..TTTs Novel: No cat down 1 47 YKL130C SHE2 involved in cell polarity M[46] C.CCGCGC..TTTs Novel: No cat down 1 47 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[46] C.CCGCGC..TTTs Novel: No cat down 1 47 YGR059W SPR3 septin protein involved in sporulation M[46] C.CCGCGC..TTTs Novel: No cat down 1 46 YNR051C BRE5 protein of unknown function M[46] C.CCGCGC..TTTs Novel: No cat down 1 46 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[46] C.CCGCGC..TTTs Novel: No cat down 1 46 YLR450W HMG2 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme M[46] C.CCGCGC..TTTs Novel: No cat down 1 45 YCR023C Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 45 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[46] C.CCGCGC..TTTs Novel: No cat down 1 44 YLL029W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 44 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[46] C.CCGCGC..TTTs Novel: No cat down 1 44 YCR047C BUD23 M[46] C.CCGCGC..TTTs Novel: No cat down 1 44 YLR295C ATP14 ATP synthase subunit h M[46] C.CCGCGC..TTTs Novel: No cat down 1 43 YBL013W FMT1 Methionyl-tRNA Transformylase M[46] C.CCGCGC..TTTs Novel: No cat down 1 43 YLL038C ENT4 Ent4p M[46] C.CCGCGC..TTTs Novel: No cat down 1 43 YPL222W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 43 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[46] C.CCGCGC..TTTs Novel: No cat down 1 43 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[46] C.CCGCGC..TTTs Novel: No cat down 1 42 YNL193W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 42 YGR156W PTI1 M[46] C.CCGCGC..TTTs Novel: No cat down 1 42 YDR323C PEP7 cytosolic and peripheral membrane protein with three zinc fingers; cysteine rich regions of amino acids are essential for function M[46] C.CCGCGC..TTTs Novel: No cat down 1 42 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[46] C.CCGCGC..TTTs Novel: No cat down 1 41 YER089C PTC2 Protein phosphatase type 2C M[46] C.CCGCGC..TTTs Novel: No cat down 1 41 YPL164C MLH3 MutL Homolog M[46] C.CCGCGC..TTTs Novel: No cat down 1 41 YJL083W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 41 YLR267W BOP2 Bypass of PAM1 M[46] C.CCGCGC..TTTs Novel: No cat down 1 40 YOR033C EXO1 exonuclease M[46] C.CCGCGC..TTTs Novel: No cat down 1 40 YCR011C ADP1 Active transport ATPase M[46] C.CCGCGC..TTTs Novel: No cat down 1 40 YMR302C PRP12 Integral membrane mitochondrial protein M[46] C.CCGCGC..TTTs Novel: No cat down 1 39 YCR010C ADY2 Protein involved in Accumulation of DYads M[46] C.CCGCGC..TTTs Novel: No cat down 1 39 YML053C Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 38 YHR172W SPC97 spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP M[46] C.CCGCGC..TTTs Novel: No cat down 1 37 YER111C SWI4 transcription factor M[46] C.CCGCGC..TTTs Novel: No cat down 1 37 YHR102W KIC1 PAK/Ste20 kinase family M[46] C.CCGCGC..TTTs Novel: No cat down 1 37 YPL113C Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 37 YPL231W FAS2 alpha subunit of fatty acid synthase M[46] C.CCGCGC..TTTs Novel: No cat down 1 36 YHR096C HXT5 hexose transporter M[46] C.CCGCGC..TTTs Novel: No cat down 1 36 YIR036C Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 36 YKR054C DYN1 heavy chain of cytoplasmic dynein M[46] C.CCGCGC..TTTs Novel: No cat down 1 36 YNL279W PRM1 pheromone-regulated membrane protein M[46] C.CCGCGC..TTTs Novel: No cat down 1 36 YOR373W NUD1 spindle pole body protein M[46] C.CCGCGC..TTTs Novel: No cat down 1 36 YJL155C FBP26 fructose-2,6-bisphosphatase M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YLR045C STU2 spindle pole body component M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YMR178W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YOR054C Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YDR530C APA2 5',5'''-P-1,P-4-tetraphosphate phosphorylase II M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YGR277C Protein required for cell viability M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YAL038W CDC19 Pyruvate kinase M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YOL132W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[46] C.CCGCGC..TTTs Novel: No cat down 1 35 YOL026C Protein required for cell viability M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YGR016W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YMR105C PGM2 Phosphoglucomutase M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YDR246W TRS23 TRAPP subunit of 23 kDa M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YLR024C UBR2 ubiquitin-protein ligase (E3) M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YKL029C MAE1 mitochondrial malic enzyme M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YBR071W Hypothetical ORF M[46] C.CCGCGC..TTTs Novel: No cat down 1 34 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[46] C.CCGCGC..TTTs Novel: No cat down 1 33 YJL157C FAR1 Cdc28p kinase inhibitor M[46] C.CCGCGC..TTTs Novel: No cat down 1 33 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[46] C.CCGCGC..TTTs Novel: No cat down 1 33 YPR113W PIS1 phosphatidylinositol synthase M[46] C.CCGCGC..TTTs Novel: No cat down 1 33 YNL007C SIS1 sit4 suppressor, dnaJ homolog M[46] C.CCGCGC..TTTs Novel: No cat down 1 32 YMR243C ZRC1 involved in zinc and cadmium ion homeostasis M[46] C.CCGCGC..TTTs Novel: No cat down 1 31 YHL031C GOS1 Golgi SNARE protein M[46] C.CCGCGC..TTTs Novel: No cat down 1 31 YHR204W MNL1 M[46] C.CCGCGC..TTTs Novel: No cat down 1 31 YKL038W RGT1 transcriptional repressor and activator M[46] C.CCGCGC..TTTs Novel: No cat down 1 30 YJL047C RTT101 Regulator of Ty1 Transposition M[46] M[47] TTTT............gGGGT Novel: No cat down 2 90 YMR321C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 2 83 YDR076W RAD55 RecA homolog (related to DMC1, RAD51, RAD57), interacts with Rad51p and Rad57p by two-hybrid analysis M[47] TTTT............gGGGT Novel: No cat down 2 77 YMR181C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 2 73 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[47] TTTT............gGGGT Novel: No cat down 2 70 YMR183C SSO2 post-Golgi t-SNARE M[47] TTTT............gGGGT Novel: No cat down 2 69 YOL135C MED7 Stoichiometric member of mediator complex M[47] TTTT............gGGGT Novel: No cat down 2 68 YER176W ECM32 DNA Helicase I M[47] TTTT............gGGGT Novel: No cat down 2 68 YNL193W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 2 68 YGR096W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 2 67 YOR028C CIN5 bZIP protein, can activate transcription from a promoter containing a Yap recognition site M[47] TTTT............gGGGT Novel: No cat down 2 67 YOR027W STI1 Heat shock protein also induced by canavanine and entry into stationary phase M[47] TTTT............gGGGT Novel: No cat down 2 65 YJL153C INO1 L-myo-inositol-1-phosphate synthase M[47] TTTT............gGGGT Novel: No cat down 2 65 YER166W DNF1 Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 57 YML119W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 55 YPR151C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 55 YPR149W NCE102 Involved in secretion of proteins that lack classical secretory signal sequences M[47] TTTT............gGGGT Novel: No cat down 1 49 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[47] TTTT............gGGGT Novel: No cat down 1 46 YPR156C TPO3 M[47] TTTT............gGGGT Novel: No cat down 1 46 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[47] TTTT............gGGGT Novel: No cat down 1 46 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[47] TTTT............gGGGT Novel: No cat down 1 46 YER158C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 46 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[47] TTTT............gGGGT Novel: No cat down 1 46 YMR262W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 46 YJL163C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 45 YKL094W YJU3 Product of gene unknown M[47] TTTT............gGGGT Novel: No cat down 1 45 YOR051C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 44 YNL200C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 44 YOR229W WTM2 Transcriptional modulator M[47] TTTT............gGGGT Novel: No cat down 1 43 YPR116W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 43 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[47] TTTT............gGGGT Novel: No cat down 1 43 YJL170C ASG7 An a-specific gene that is induced to a higher expression level by alpha factor M[47] TTTT............gGGGT Novel: No cat down 1 42 YBR284W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 42 YDR077W SED1 putative cell surface glycoprotein M[47] TTTT............gGGGT Novel: No cat down 1 42 YDR078C SHU2 M[47] TTTT............gGGGT Novel: No cat down 1 42 YPL029W SUV3 putative ATP-dependent helicase M[47] TTTT............gGGGT Novel: No cat down 1 42 YDL076C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 41 YPL016W SWI1 Zinc-finger transcription factor M[47] TTTT............gGGGT Novel: No cat down 1 41 YPL015C HST2 similar to Sir2p M[47] TTTT............gGGGT Novel: No cat down 1 41 YBR067C TIP1 cell wall mannoprotein M[47] TTTT............gGGGT Novel: No cat down 1 41 YHL020C OPI1 negative regulator of phospholipid biosynthesis M[47] TTTT............gGGGT Novel: No cat down 1 41 YDL197C ASF2 Anti-silencing protein, involved in transcription M[47] TTTT............gGGGT Novel: No cat down 1 41 YLR207W HRD3 involved in HMG-CoA reductase degradation M[47] TTTT............gGGGT Novel: No cat down 1 40 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[47] TTTT............gGGGT Novel: No cat down 1 40 YKL049C CSE4 high similarity to histone H3 and to human centromere protein CENP-A M[47] TTTT............gGGGT Novel: No cat down 1 40 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[47] TTTT............gGGGT Novel: No cat down 1 40 YLR295C ATP14 ATP synthase subunit h M[47] TTTT............gGGGT Novel: No cat down 1 40 YOR222W ODC2 M[47] TTTT............gGGGT Novel: No cat down 1 40 YBR035C PDX3 pyridoxine (pyridoxiamine) phosphate oxidase M[47] TTTT............gGGGT Novel: No cat down 1 39 YJR013W Protein required for cell viability M[47] TTTT............gGGGT Novel: No cat down 1 39 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[47] TTTT............gGGGT Novel: No cat down 1 39 YPL176C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 39 YHR096C HXT5 hexose transporter M[47] TTTT............gGGGT Novel: No cat down 1 39 YAL037W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 39 YAL036C FUN11 similar to Xenopus GTP-binding protein DRG M[47] TTTT............gGGGT Novel: No cat down 1 39 YHR049W FSH1 M[47] TTTT............gGGGT Novel: No cat down 1 39 YAL035W FUN12 97 kDa protein M[47] TTTT............gGGGT Novel: No cat down 1 39 YPR174C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 39 YER066W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 38 YPL269W KAR9 Component of cortical adaptor complex that orients microtubules M[47] TTTT............gGGGT Novel: No cat down 1 38 YBR205W KTR3 Putative alpha-1,2-mannosyltransferase M[47] TTTT............gGGGT Novel: No cat down 1 38 YDR349C YPS7 GPI-anchored aspartic protease M[47] TTTT............gGGGT Novel: No cat down 1 38 YHR065C RRP3 RRP3 is a DEAD box gene homologous to eIF-4a which encodes an RNA-dependent ATPase possessing helicase activity which is not specific for RNA M[47] TTTT............gGGGT Novel: No cat down 1 38 YNR051C BRE5 protein of unknown function M[47] TTTT............gGGGT Novel: No cat down 1 37 YMR160W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 37 YGL207W SPT16 global regulator of transcription M[47] TTTT............gGGGT Novel: No cat down 1 37 YGL206C CHC1 presumed vesicle coat protein M[47] TTTT............gGGGT Novel: No cat down 1 37 YER048C CAJ1 homologous to E. coli DnaJ M[47] TTTT............gGGGT Novel: No cat down 1 37 YFL037W TUB2 beta-tubulin M[47] TTTT............gGGGT Novel: No cat down 1 37 YER090W TRP2 anthranilate synthase Component I M[47] TTTT............gGGGT Novel: No cat down 1 37 YER091C MET6 vitamin B12-(cobalamin)-independent isozyme of methionine synthase (also called N5-methyltetrahydrofolate homocysteine methyltransferase or 5-methyltetrahydropteroyl triglutamate homocysteine methyltransferase) M[47] TTTT............gGGGT Novel: No cat down 1 37 YPL041C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 37 YNL066W SUN4 Protein involved in the aging process M[47] TTTT............gGGGT Novel: No cat down 1 37 YHR078W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 37 YHR079C IRE1 Ire1p is a transmembrane protein that has both serine-threonine kinase and endoribonuclease activities M[47] TTTT............gGGGT Novel: No cat down 1 37 YPR015C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 37 YOL097C WRS1 cytoplasmic tryptophanyl-tRNA synthetase M[47] TTTT............gGGGT Novel: No cat down 1 37 YLR412W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 36 YIL083C Protein required for cell viability M[47] TTTT............gGGGT Novel: No cat down 1 36 YKL121W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 36 YMR148W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 36 YKL045W PRI2 p58 polypeptide of DNA primase M[47] TTTT............gGGGT Novel: No cat down 1 36 YCR073C SSK22 protein kinase M[47] TTTT............gGGGT Novel: No cat down 1 36 YJR006W HYS2 DNA polymerase delta 55 KD subunit M[47] TTTT............gGGGT Novel: No cat down 1 36 YIL145C PAN6 M[47] TTTT............gGGGT Novel: No cat down 1 36 YMR283C RIT1 Initiator methionine tRNA 2'-O-ribosyl phosphate transferase M[47] TTTT............gGGGT Novel: No cat down 1 36 YOR145C Protein required for cell viability M[47] TTTT............gGGGT Novel: No cat down 1 36 YJL099W CHS6 involved in chitin biosynthesis M[47] TTTT............gGGGT Novel: No cat down 1 36 YIL138C TPM2 Tropomyosin isoform 2 M[47] TTTT............gGGGT Novel: No cat down 1 36 YDL030W PRP9 RNA splicing factor M[47] TTTT............gGGGT Novel: No cat down 1 36 YJL194W CDC6 pre-initiation complex component M[47] TTTT............gGGGT Novel: No cat down 1 35 YGL146C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 35 YOR271C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 35 YFL040W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 35 YFL039C ACT1 Actin M[47] TTTT............gGGGT Novel: No cat down 1 35 YNL197C WHI3 Putative RNA binding protein M[47] TTTT............gGGGT Novel: No cat down 1 35 YNL037C IDH1 alpha-4-beta-4 subunit of mitochondrial isocitrate dehydrogenase 1 M[47] TTTT............gGGGT Novel: No cat down 1 35 YNL038W GPI15 human Pig-H homolog; required for N-acetylglucosaminyphosphatidylinositol synthesis.l M[47] TTTT............gGGGT Novel: No cat down 1 35 YOR152C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 35 YOL038W PRE6 alpha-type of subunit of 20S proteasome M[47] TTTT............gGGGT Novel: No cat down 1 35 YFR048W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 35 YMR263W SAP30 M[47] TTTT............gGGGT Novel: No cat down 1 35 YCR031C RPS14A Ribosomal protein S14A (rp59A) M[47] TTTT............gGGGT Novel: No cat down 1 35 YDL234C GYP7 GTPase-activating protein M[47] TTTT............gGGGT Novel: No cat down 1 34 YGL083W SCY1 similar to bovine rhodopsin kinase; suppressor of GTPase mutation M[47] TTTT............gGGGT Novel: No cat down 1 34 YPL045W VPS16 Vacuolar sorting protein M[47] TTTT............gGGGT Novel: No cat down 1 34 YNL077W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 34 YJL018W Protein required for cell viability M[47] TTTT............gGGGT Novel: No cat down 1 34 YDR536W STL1 sugar transporter-like protein M[47] TTTT............gGGGT Novel: No cat down 1 34 YGL254W FZF1 putative transcription factor, has five zinc fingers M[47] TTTT............gGGGT Novel: No cat down 1 34 YOL138C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 34 YNL263C YIF1 Similar to NADH dehydrogenases M[47] TTTT............gGGGT Novel: No cat down 1 34 YGR155W CYS4 Cystathionine beta-synthase M[47] TTTT............gGGGT Novel: No cat down 1 34 YDR505C PSP1 high-copy suppressor of cdc17 DNA polymerase alpha mutations M[47] TTTT............gGGGT Novel: No cat down 1 34 YGR161C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 33 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[47] TTTT............gGGGT Novel: No cat down 1 33 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[47] TTTT............gGGGT Novel: No cat down 1 33 YGL191W COX13 subunit VIa of cytochrome c oxidase, may specifically interact with ATP M[47] TTTT............gGGGT Novel: No cat down 1 33 YGL190C CDC55 Protein phosphatase 2A regulatory subunit B M[47] TTTT............gGGGT Novel: No cat down 1 33 YJL167W ERG20 Farnesyl diphosphate synthetase (FPP synthetase) M[47] TTTT............gGGGT Novel: No cat down 1 33 YBR252W DUT1 dUTP pyrophosphatase (dUTPase) M[47] TTTT............gGGGT Novel: No cat down 1 33 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[47] TTTT............gGGGT Novel: No cat down 1 33 YGL159W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 33 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[47] TTTT............gGGGT Novel: No cat down 1 33 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[47] TTTT............gGGGT Novel: No cat down 1 33 YGR166W KRE11 involved in cell wall biogenesis M[47] TTTT............gGGGT Novel: No cat down 1 33 YOR141C ARP8 actin-related protein M[47] TTTT............gGGGT Novel: No cat down 1 33 YOR140W SFL1 Transcription factor M[47] TTTT............gGGGT Novel: No cat down 1 33 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[47] TTTT............gGGGT Novel: No cat down 1 33 YPL220W RPL1A Ribosomal protein L1A, forms part of the 60S ribosomal subunit M[47] TTTT............gGGGT Novel: No cat down 1 33 YBL031W SHE1 Product of gene unknown M[47] TTTT............gGGGT Novel: No cat down 1 33 YBL030C PET9 mitochondrial ADP/ATP translocator M[47] TTTT............gGGGT Novel: No cat down 1 33 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[47] TTTT............gGGGT Novel: No cat down 1 33 YKL093W MBR1 MBR1 protein precursor M[47] TTTT............gGGGT Novel: No cat down 1 33 YKL092C BUD2 GTPase-activating protein (GAP) for Rsr1p/Bud1p M[47] TTTT............gGGGT Novel: No cat down 1 33 YDR394W RPT3 ATPase (AAA family) component of the 26S proteasome complex M[47] TTTT............gGGGT Novel: No cat down 1 32 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[47] TTTT............gGGGT Novel: No cat down 1 32 YKL127W PGM1 phosphoglucomutase, minor isoform M[47] TTTT............gGGGT Novel: No cat down 1 32 YDR352W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 32 YNL258C DSL1 M[47] TTTT............gGGGT Novel: No cat down 1 32 YOL082W CVT19 CVT20 M[47] TTTT............gGGGT Novel: No cat down 1 32 YBR265W TSC10 3-ketosphinganine reductase M[47] TTTT............gGGGT Novel: No cat down 1 32 YOL047C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 32 YGL189C RPS26A Ribosomal protein S26A M[47] TTTT............gGGGT Novel: No cat down 1 32 YPR113W PIS1 phosphatidylinositol synthase M[47] TTTT............gGGGT Novel: No cat down 1 32 YMR008C PLB1 Phospholipase B (lypophospholipase) M[47] TTTT............gGGGT Novel: No cat down 1 32 YGR201C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 32 YGR284C ERV29 ER-Golgi transport vesicle protein M[47] TTTT............gGGGT Novel: No cat down 1 32 YPR169W Protein required for cell viability M[47] TTTT............gGGGT Novel: No cat down 1 31 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[47] TTTT............gGGGT Novel: No cat down 1 31 YKR052C MRS4 mitochondrial carrier protein, highly homologous to Mrs3p M[47] TTTT............gGGGT Novel: No cat down 1 31 YKR051W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 31 YPL153C RAD53 protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation M[47] TTTT............gGGGT Novel: No cat down 1 31 YPR035W GLN1 glutamine synthetase M[47] TTTT............gGGGT Novel: No cat down 1 31 YBR239C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 31 YNR017W MAS6 23 kDa mitochondrial inner membrane protein M[47] TTTT............gGGGT Novel: No cat down 1 31 YMR042W ARG80 transcription factor M[47] TTTT............gGGGT Novel: No cat down 1 31 YKL067W YNK1 Nucleoside diphosphate kinase M[47] TTTT............gGGGT Novel: No cat down 1 31 YKL065C YET1 Yeast endoplasmic reticulum 25 kDa transmembrane protein M[47] TTTT............gGGGT Novel: No cat down 1 31 YER089C PTC2 Protein phosphatase type 2C M[47] TTTT............gGGGT Novel: No cat down 1 31 YNL190W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 31 YPL075W GCR1 trans-acting positive regulator of the enolase and glyceraldehyde-3-phosphate dehydrogenase gene families M[47] TTTT............gGGGT Novel: No cat down 1 31 YDR135C YCF1 metal resistance protein, similar to multidrug resistance proteins and cystic fibrosis protein CFTR M[47] TTTT............gGGGT Novel: No cat down 1 31 YOR188W MSB1 involved in polarized growth M[47] TTTT............gGGGT Novel: No cat down 1 31 YPL160W CDC60 cytosolic leucyl tRNA synthetase M[47] TTTT............gGGGT Novel: No cat down 1 31 YPL159C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 30 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[47] TTTT............gGGGT Novel: No cat down 1 30 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[47] TTTT............gGGGT Novel: No cat down 1 30 YNL204C SPS18 Transcription factor M[47] TTTT............gGGGT Novel: No cat down 1 30 YKL113C RAD27 42 kDa 5' to 3' exonuclease required for Okazaki fragment processing M[47] TTTT............gGGGT Novel: No cat down 1 30 YKL151C Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 30 YKR041W Hypothetical ORF M[47] TTTT............gGGGT Novel: No cat down 1 30 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[47] TTTT............gGGGT Novel: No cat down 1 30 YPR037C ERV2 M[47] TTTT............gGGGT Novel: No cat down 1 30 YGR124W ASN2 asparagine synthetase M[47] TTTT............gGGGT Novel: No cat down 1 30 YDL139C SCM3 Suppressor of chromosome missegregation M[47] TTTT............gGGGT Novel: No cat down 1 30 YOL086C ADH1 Alcohol dehydrogenase M[47] TTTT............gGGGT Novel: No cat down 1 30 YOL086W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[47] TTTT............gGGGT Novel: No cat down 1 30 YIL117C PRM5 M[47] TTTT............gGGGT Novel: No cat down 1 30 YIL118W RHO3 ras homolog--GTP binding protein M[47] M[48] TGTR.CAW Novel: No cat down 2 74 YPR145W ASN1 asparagine synthetase M[48] TGTR.CAW Novel: No cat down 2 74 YPR147C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 41 YDL133W Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 40 YPR093C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 40 YJR063W RPA12 A12.2 subunit of RNA polymerase I M[48] TGTR.CAW Novel: No cat down 1 40 YPL093W NOG1 (putative) nucleolar G-protein; homologs identified in human and Trypanosoma brucei M[48] TGTR.CAW Novel: No cat down 1 40 YBR261C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 40 YIL021W RPB3 45 kDa subunit of RNA polymerase II M[48] TGTR.CAW Novel: No cat down 1 40 YIL020C HIS6 phosphoribosyl-5-amino-1-phosphoribosyl-4-imidazolecarboxiamide isomerase M[48] TGTR.CAW Novel: No cat down 1 40 YGL126W SCS3 involved in inositol biosynthesis M[48] TGTR.CAW Novel: No cat down 1 40 YKL069W Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 40 YIR036C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 40 YLR363W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[48] TGTR.CAW Novel: No cat down 1 40 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[48] TGTR.CAW Novel: No cat down 1 40 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[48] TGTR.CAW Novel: No cat down 1 39 YPR120C CLB5 B-type cyclin M[48] TGTR.CAW Novel: No cat down 1 39 YPR119W CLB2 G(sub)2-specific B-type cyclin M[48] TGTR.CAW Novel: No cat down 1 39 YDR399W HPT1 hypoxanthine guanine phosphoribosyltransferase M[48] TGTR.CAW Novel: No cat down 1 39 YDR408C ADE8 glycinamide ribotide transformylase M[48] TGTR.CAW Novel: No cat down 1 39 YKL038W RGT1 transcriptional repressor and activator M[48] TGTR.CAW Novel: No cat down 1 39 YIL037C PRM2 M[48] TGTR.CAW Novel: No cat down 1 39 YOR065W CYT1 Cytochrome c1 M[48] TGTR.CAW Novel: No cat down 1 39 YGR088W CTT1 cytoplasmic catalase T M[48] TGTR.CAW Novel: No cat down 1 39 YDR527W Protein required for cell viability M[48] TGTR.CAW Novel: No cat down 1 39 YDL031W DBP10 similar to RNA helicases M[48] TGTR.CAW Novel: No cat down 1 39 YBR070C Protein required for cell viability M[48] TGTR.CAW Novel: No cat down 1 39 YOR033C EXO1 exonuclease M[48] TGTR.CAW Novel: No cat down 1 39 YPR169W Protein required for cell viability M[48] TGTR.CAW Novel: No cat down 1 39 YKL128C PMU1 Phospo-mutase homolog M[48] TGTR.CAW Novel: No cat down 1 39 YBR052C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 39 YKL178C STE3 a factor recptor M[48] TGTR.CAW Novel: No cat down 1 39 YPL078C ATP4 F(1)F(0)-ATPase complex delta subunit, mitochondrial M[48] TGTR.CAW Novel: No cat down 1 39 YPL079W RPL21B Ribosomal protein L21B M[48] TGTR.CAW Novel: No cat down 1 39 YGL229C SAP4 Sit4 protein phosphatase-associated protein M[48] TGTR.CAW Novel: No cat down 1 39 YDR388W RVS167 (putative) cytoskeletal protein M[48] TGTR.CAW Novel: No cat down 1 39 YDR245W MNN10 galactosyltransferase M[48] TGTR.CAW Novel: No cat down 1 39 YPL031C PHO85 cyclin-dependent protein kinase M[48] TGTR.CAW Novel: No cat down 1 39 YLL022C HIF1 interacts with histone acetyltransferase M[48] TGTR.CAW Novel: No cat down 1 38 YDR118W APC4 subunit of the anaphase promoting complex (APC) M[48] TGTR.CAW Novel: No cat down 1 38 YOR035C SHE4 Required for mother cell-specific HO expression M[48] TGTR.CAW Novel: No cat down 1 38 YOR341W RPA190 RNA polymerase I subunit 190 (alpha) M[48] TGTR.CAW Novel: No cat down 1 38 YOR342C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 38 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[48] TGTR.CAW Novel: No cat down 1 38 YDR078C SHU2 M[48] TGTR.CAW Novel: No cat down 1 38 YDR077W SED1 putative cell surface glycoprotein M[48] TGTR.CAW Novel: No cat down 1 38 YCR024C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 38 YER111C SWI4 transcription factor M[48] TGTR.CAW Novel: No cat down 1 38 YHR172W SPC97 spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP M[48] TGTR.CAW Novel: No cat down 1 38 YDL064W UBC9 ubiquitin-conjugating enzyme M[48] TGTR.CAW Novel: No cat down 1 38 YDL063C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 38 YBL071W-A Similar to Hemiascomycetous yeast protein (FEBS Lett. 487(1): 31-36 (2000)). M[48] TGTR.CAW Novel: No cat down 1 38 YCR057C PWP2 regulatory protein M[48] TGTR.CAW Novel: No cat down 1 38 YGL008C PMA1 plasma membrane H+-ATPase M[48] TGTR.CAW Novel: No cat down 1 38 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[48] TGTR.CAW Novel: No cat down 1 38 YBR067C TIP1 cell wall mannoprotein M[48] TGTR.CAW Novel: No cat down 1 38 YKL119C VPH2 25.2 kDa protein involved in assembly of vacuolar H(+) ATPase M[48] TGTR.CAW Novel: No cat down 1 38 YKL120W OAC1 mitochondrial oxaloacetate transport protein M[48] TGTR.CAW Novel: No cat down 1 38 YDR277C MTH1 Protein is 61% identical to Msn3p M[48] TGTR.CAW Novel: No cat down 1 38 YGR029W ERV1 involved in mitochondrial biogenesis M[48] TGTR.CAW Novel: No cat down 1 38 YGR030C POP6 integral subunit of RNase P and apparent subunit of RNase MRP M[48] TGTR.CAW Novel: No cat down 1 37 YNL085W MKT1 retroviral protease signature protein M[48] TGTR.CAW Novel: No cat down 1 37 YNL084C END3 Required for endocytosis and organization of the cytoskeleton M[48] TGTR.CAW Novel: No cat down 1 37 YIL048W NEO1 P-Type ATPase M[48] TGTR.CAW Novel: No cat down 1 37 YIL047C SYG1 plasma membrane protein M[48] TGTR.CAW Novel: No cat down 1 37 YNL258C DSL1 M[48] TGTR.CAW Novel: No cat down 1 37 YGR240C PFK1 phosphofructokinase alpha subunit M[48] TGTR.CAW Novel: No cat down 1 37 YPR015C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 37 YIL126W STH1 helicase related protein, snf2 homolog M[48] TGTR.CAW Novel: No cat down 1 37 YDL160C DHH1 (putative) DEAD box RNA helicase M[48] TGTR.CAW Novel: No cat down 1 37 YDL161W ENT1 Ent1p M[48] TGTR.CAW Novel: No cat down 1 37 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[48] TGTR.CAW Novel: No cat down 1 37 YBR112C CYC8 Transcription regulatory protein M[48] TGTR.CAW Novel: No cat down 1 37 YAL025C MAK16 putative nuclear protein M[48] TGTR.CAW Novel: No cat down 1 37 YNR051C BRE5 protein of unknown function M[48] TGTR.CAW Novel: No cat down 1 37 YDR188W CCT6 component of cytoplasmic chaperonin complex M[48] TGTR.CAW Novel: No cat down 1 37 YIR011C STS1 (putative) involved in control rRNA stability and protein transport M[48] TGTR.CAW Novel: No cat down 1 37 YIR010W DSN1 YIR010W M[48] TGTR.CAW Novel: No cat down 1 37 YER106W MAM1 monopolin; involved in chromosome attachment to meiotic spindle M[48] TGTR.CAW Novel: No cat down 1 37 YER107C GLE2 homologous to S. pombe RAE1 gene; 2-hybrid analysis demonstrates an interaction with Srp1p and Rip1p; copurifies with Nup116p M[48] TGTR.CAW Novel: No cat down 1 37 YOL012C HTZ1 An evolutionarily conserved member of the histone H2A F/Z family of histone variants M[48] TGTR.CAW Novel: No cat down 1 37 YJL149W Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 37 YIL073C SPO22 meiosis-specific phospholipase A2 homolog M[48] TGTR.CAW Novel: No cat down 1 37 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[48] TGTR.CAW Novel: No cat down 1 37 YJL008C CCT8 Component of Chaperonin Containing T-complex subunit eight M[48] TGTR.CAW Novel: No cat down 1 37 YDR501W PLM2 PLasmid Maintenance M[48] TGTR.CAW Novel: No cat down 1 37 YDR502C SAM2 S-adenosylmethionine synthetase M[48] TGTR.CAW Novel: No cat down 1 37 YHR085W Protein required for cell viability M[48] TGTR.CAW Novel: No cat down 1 37 YKL043W PHD1 putative transcription factor M[48] TGTR.CAW Novel: No cat down 1 36 YAR003W SWD1 M[48] TGTR.CAW Novel: No cat down 1 36 YAR007C RFA1 69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1 M[48] TGTR.CAW Novel: No cat down 1 36 YOR014W RTS1 B-type regulatory subunit of protein phosphatase 2A (PP2A) M[48] TGTR.CAW Novel: No cat down 1 36 YOR016C ERP4 p24 protein involved in membrane trafficking M[48] TGTR.CAW Novel: No cat down 1 36 YPR024W YME1 Mitochondrial member of the CDC48/PAS1/SEC18 family of ATPases M[48] TGTR.CAW Novel: No cat down 1 36 YPR025C CCL1 novel cyclin gene; encodes subunits of TFIIK, a subcomplex of transcription factor TFIIH M[48] TGTR.CAW Novel: No cat down 1 36 YAL005C SSA1 Heat shock protein of HSP70 family, cytoplasmic M[48] TGTR.CAW Novel: No cat down 1 36 YDR045C RPC11 TFIIS-like small Pol III subunit C11 M[48] TGTR.CAW Novel: No cat down 1 36 YDR044W HEM13 Coproporphyrinogen III oxidase M[48] TGTR.CAW Novel: No cat down 1 36 YNL054W VAC7 Integral vacuolar membrane protein M[48] TGTR.CAW Novel: No cat down 1 36 YOR047C STD1 homologous to MTH1; interacts with the SNF1 protein kinase and TBP in two-hybrid and in in vitro binding studies M[48] TGTR.CAW Novel: No cat down 1 36 YPL255W BBP1 Involved in mitotic and meitoic cell cycle M[48] TGTR.CAW Novel: No cat down 1 36 YKL033W Protein required for cell viability M[48] TGTR.CAW Novel: No cat down 1 36 YKL032C IXR1 intrastrand crosslink recognition protein M[48] TGTR.CAW Novel: No cat down 1 36 YNL271C BNI1 contains formin homology domains; homologous to BNR1 (BNI1 related protein) M[48] TGTR.CAW Novel: No cat down 1 36 YHR174W ENO2 enolase M[48] TGTR.CAW Novel: No cat down 1 36 YKL008C LAC1 Homolog of the LAG1 longevity gene. M[48] TGTR.CAW Novel: No cat down 1 36 YKL009W MRT4 involved in mRNA decay M[48] TGTR.CAW Novel: No cat down 1 36 YML081W Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 36 YJR106W ECM27 (putative) involved in cell wall biogenesis M[48] TGTR.CAW Novel: No cat down 1 36 YNL112W DBP2 ATP-dependent RNA helicase of DEAD box family M[48] TGTR.CAW Novel: No cat down 1 36 YNL111C CYB5 cytochrome b5 M[48] TGTR.CAW Novel: No cat down 1 36 YIR007W Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 36 YIR008C PRI1 p48 polypeptide of DNA primase M[48] TGTR.CAW Novel: No cat down 1 36 YPL218W SAR1 GTP-binding protein of the ARF family M[48] TGTR.CAW Novel: No cat down 1 36 YPL217C BMS1 BMH1 sensitive M[48] TGTR.CAW Novel: No cat down 1 36 YCR044C PER1 Protein Processing in the ER M[48] TGTR.CAW Novel: No cat down 1 36 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[48] TGTR.CAW Novel: No cat down 1 36 YMR253C Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 35 YIL011W TIR3 M[48] TGTR.CAW Novel: No cat down 1 35 YDL239C ADY3 Protein involved in Accumulation of DYads M[48] TGTR.CAW Novel: No cat down 1 35 YDL240W LRG1 Protein similar to LIM-domain proteins and to rho/rac GTPase-activating family of proteins M[48] TGTR.CAW Novel: No cat down 1 35 YCR033W SNT1 M[48] TGTR.CAW Novel: No cat down 1 35 YDR217C RAD9 cell cycle arrest protein M[48] TGTR.CAW Novel: No cat down 1 35 YDR216W ADR1 positive transcriptional regulator of ADH2 and peroxisomal protein genes M[48] TGTR.CAW Novel: No cat down 1 34 YPR074C TKL1 Transketolase 1 M[48] TGTR.CAW Novel: No cat down 1 34 YPR019W CDC54 Involved in initiation of DNA replication M[48] TGTR.CAW Novel: No cat down 1 34 YJR077C MIR1 Product of gene unknown M[48] TGTR.CAW Novel: No cat down 1 33 YBL066C SEF1 putative transcription factor M[48] TGTR.CAW Novel: No cat down 1 33 YFL033C RIM15 Trehalose-associated protein kinase related to S. pombe cek1+ M[48] TGTR.CAW Novel: No cat down 1 33 YFL034W Hypothetical ORF M[48] TGTR.CAW Novel: No cat down 1 33 YHR086W NAM8 putative RNA binding protein, involved in meiosis-specific splicing of the REC107 transcripts in cooperation with the Mer1 protein M[48] TGTR.CAW Novel: No cat down 1 32 YNL288W CAF40 CCR4 Associated Factor 40 kDa M[48] TGTR.CAW Novel: No cat down 1 32 YDR176W NGG1 transcription factor; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex M[48] TGTR.CAW Novel: No cat down 1 32 YOL065C INP54 inositol polyphosphate 5-phosphatase M[48] TGTR.CAW Novel: No cat down 1 31 YNL068C FKH2 Fork Head homolog two M[48] TGTR.CAW Novel: No cat down 1 31 YGR054W Hypothetical ORF M[48] M[49] .YCSk.........KCGG Known: Put3 down 2 74 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[49] .YCSk.........KCGG Known: Put3 down 2 74 YER158C Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 2 74 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[49] .YCSk.........KCGG Known: Put3 down 2 74 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[49] .YCSk.........KCGG Known: Put3 down 1 42 YOL135C MED7 Stoichiometric member of mediator complex M[49] .YCSk.........KCGG Known: Put3 down 1 42 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[49] .YCSk.........KCGG Known: Put3 down 1 41 YMR147W Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 41 YLL023C Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 41 YML125C Protein required for cell viability M[49] .YCSk.........KCGG Known: Put3 down 1 41 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[49] .YCSk.........KCGG Known: Put3 down 1 41 YER048W-A Similar to D. melanogaster protein; weaker homology to C. elegans protein with similarity to human cdk7/cyclin H assembly factor M[49] .YCSk.........KCGG Known: Put3 down 1 41 YHR005C GPA1 alpha subunit of G protein coupled to mating factor receptors M[49] .YCSk.........KCGG Known: Put3 down 1 40 YHR008C SOD2 Manganese-containing superoxide dismutase M[49] .YCSk.........KCGG Known: Put3 down 1 40 YDR295C PLO2 Ploidy-related M[49] .YCSk.........KCGG Known: Put3 down 1 40 YHR189W Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 40 YBR052C Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 40 YDR277C MTH1 Protein is 61% identical to Msn3p M[49] .YCSk.........KCGG Known: Put3 down 1 40 YGR016W Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 38 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[49] .YCSk.........KCGG Known: Put3 down 1 38 YDL138W RGT2 glucose permease M[49] .YCSk.........KCGG Known: Put3 down 1 38 YLL028W TPO1 polyamine transport protein M[49] .YCSk.........KCGG Known: Put3 down 1 37 YIL104C SHQ1 Essential protein involved in snoRNA accumulation. M[49] .YCSk.........KCGG Known: Put3 down 1 36 YOR134W BAG7 GTPase activating protein (GAP) M[49] .YCSk.........KCGG Known: Put3 down 1 36 YPR001W CIT3 Mitochondrial isoform of citrate synthase M[49] .YCSk.........KCGG Known: Put3 down 1 35 YOR363C PIP2 activator of peroxisome proliferation M[49] .YCSk.........KCGG Known: Put3 down 1 35 YJL129C TRK1 180 kDa high affinity potassium transporter M[49] .YCSk.........KCGG Known: Put3 down 1 34 YPL063W Protein required for cell viability M[49] .YCSk.........KCGG Known: Put3 down 1 34 YGR049W SCM4 suppressor of cdc4 mutations M[49] .YCSk.........KCGG Known: Put3 down 1 33 YGR096W Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 33 YMR160W Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 32 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[49] .YCSk.........KCGG Known: Put3 down 1 31 YOR373W NUD1 spindle pole body protein M[49] .YCSk.........KCGG Known: Put3 down 1 31 YJR122W CAF17 component of CCR4 transcriptional complex M[49] .YCSk.........KCGG Known: Put3 down 1 31 YMR251W Hypothetical ORF M[49] .YCSk.........KCGG Known: Put3 down 1 31 YPL232W SSO1 post-Golgi t-SNARE M[49] .YCSk.........KCGG Known: Put3 down 1 31 YGR245C SDA1 Severe Depolymerization of Actin M[49] .YCSk.........KCGG Known: Put3 down 1 30 YGR178C PBP1 interacts with poly(A)-binding protein M[49] .YCSk.........KCGG Known: Put3 down 1 30 YIR036C Hypothetical ORF M[49] M[50] .CGG.............KCGV Novel: No cat down 1 40 YMR314W PRE5 alpha-type of subunit of 20S proteasome M[50] .CGG.............KCGV Novel: No cat down 1 40 YDR052C DBF4 Regulatory subunit of Cdc7p-Dbf4p kinase complex M[50] .CGG.............KCGV Novel: No cat down 1 40 YNL270C ALP1 Basic amino acid permease M[50] .CGG.............KCGV Novel: No cat down 1 40 YOL132W Hypothetical ORF M[50] .CGG.............KCGV Novel: No cat down 1 40 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[50] .CGG.............KCGV Novel: No cat down 1 39 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[50] .CGG.............KCGV Novel: No cat down 1 39 YJL157C FAR1 Cdc28p kinase inhibitor M[50] .CGG.............KCGV Novel: No cat down 1 38 YMR251W Hypothetical ORF M[50] .CGG.............KCGV Novel: No cat down 1 36 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[50] .CGG.............KCGV Novel: No cat down 1 36 YOL082W CVT19 CVT20 M[50] .CGG.............KCGV Novel: No cat down 1 36 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[50] .CGG.............KCGV Novel: No cat down 1 33 YDR425W Hypothetical ORF M[50] M[51] ...WGTGACg. Novel: Sum1 down 2 77 YJR030C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 2 72 YDR398W UTP5 Protein required for cell viability M[51] ...WGTGACg. Novel: Sum1 down 2 68 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[51] ...WGTGACg. Novel: Sum1 down 2 68 YCL029C BIK1 Microtubule-binding protein M[51] ...WGTGACg. Novel: Sum1 down 2 64 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[51] ...WGTGACg. Novel: Sum1 down 2 64 YPR169W Protein required for cell viability M[51] ...WGTGACg. Novel: Sum1 down 1 43 YBR284W Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 43 YGR274C TAF1 TFIID 145 KDa subunit M[51] ...WGTGACg. Novel: Sum1 down 1 43 YPL032C SVL3 (putative) involved in vacuole function M[51] ...WGTGACg. Novel: Sum1 down 1 43 YIL142W CCT2 molecular chaperone M[51] ...WGTGACg. Novel: Sum1 down 1 42 YER005W YND1 apyrase (NDPase/NTPase) M[51] ...WGTGACg. Novel: Sum1 down 1 42 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[51] ...WGTGACg. Novel: Sum1 down 1 42 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[51] ...WGTGACg. Novel: Sum1 down 1 42 YDL180W Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 42 YGR225W AMA1 Required for sporulation; highly induced during sporulation M[51] ...WGTGACg. Novel: Sum1 down 1 42 YMR231W PEP5 peripheral vaculor membrane protein; putative Zn-finger protein M[51] ...WGTGACg. Novel: Sum1 down 1 42 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[51] ...WGTGACg. Novel: Sum1 down 1 42 YML094W GIM5 bovine prefoldin subunit 5 homolog (putative) M[51] ...WGTGACg. Novel: Sum1 down 1 42 YKL029C MAE1 mitochondrial malic enzyme M[51] ...WGTGACg. Novel: Sum1 down 1 42 YFR021W AUT10 Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 41 YGR252W GCN5 histone acetyltransferase M[51] ...WGTGACg. Novel: Sum1 down 1 41 YGR253C PUP2 Proteasome subunit M[51] ...WGTGACg. Novel: Sum1 down 1 41 YNL024C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 41 YOR214C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 41 YOL092W Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 41 YBR046C ZTA1 Homolog to quinone oxidoreductase (E. coli) M[51] ...WGTGACg. Novel: Sum1 down 1 40 YPL132W COX11 mitochondrial membrane protein required for insertion of Cu(B) and magnesium during assembly of cytochrome c oxidase M[51] ...WGTGACg. Novel: Sum1 down 1 40 YFL041W FET5 multicopper oxidase, type 1 integral membrane protein M[51] ...WGTGACg. Novel: Sum1 down 1 39 YPL140C MKK2 protein kinase M[51] ...WGTGACg. Novel: Sum1 down 1 37 YGR049W SCM4 suppressor of cdc4 mutations M[51] ...WGTGACg. Novel: Sum1 down 1 37 YLR340W RPP0 60S ribosomal protein P0 (A0) (L10E) M[51] ...WGTGACg. Novel: Sum1 down 1 36 YBR018C GAL7 galactose-1-phosphate uridyl transferase M[51] ...WGTGACg. Novel: Sum1 down 1 35 YBL031W SHE1 Product of gene unknown M[51] ...WGTGACg. Novel: Sum1 down 1 35 YBL030C PET9 mitochondrial ADP/ATP translocator M[51] ...WGTGACg. Novel: Sum1 down 1 35 YJL137C GLG2 glycogen synthesis initiator M[51] ...WGTGACg. Novel: Sum1 down 1 35 YDR451C YHP1 M[51] ...WGTGACg. Novel: Sum1 down 1 35 YDR450W RPS18A Ribosomal protein S18A M[51] ...WGTGACg. Novel: Sum1 down 1 35 YIL016W SNL1 18.3 kD integral membrane protein M[51] ...WGTGACg. Novel: Sum1 down 1 35 YOR310C NOP58 57 kDa nucleolar protein M[51] ...WGTGACg. Novel: Sum1 down 1 35 YNL052W COX5A Cytochrome-c oxidase chain Va M[51] ...WGTGACg. Novel: Sum1 down 1 35 YGR197C SNG1 involved in nitrosoguanidine resistance M[51] ...WGTGACg. Novel: Sum1 down 1 34 YDR328C SKP1 Skp1p encodes Cbf3d, a 29 Kd kinetochore protein subunit of CBF3 -- a complex which binds to the CDE III element of centromeres. Skp1p is also a subunit of the SculCdc4 (also termed SCFCdc4p) complex. SculCdc4 transfers ubiquitin to phosphorylated Sic1p and substrate recognition is thought to involve Skp1p. M[51] ...WGTGACg. Novel: Sum1 down 1 34 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[51] ...WGTGACg. Novel: Sum1 down 1 34 YKR058W GLG1 glycogen synthesis initiator M[51] ...WGTGACg. Novel: Sum1 down 1 34 YOR012W Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 34 YBR117C TKL2 transketolase, homologous to tkl1 M[51] ...WGTGACg. Novel: Sum1 down 1 34 YLR356W Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 34 YLR094C GIS3 GIG3 suppressor M[51] ...WGTGACg. Novel: Sum1 down 1 34 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[51] ...WGTGACg. Novel: Sum1 down 1 33 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[51] ...WGTGACg. Novel: Sum1 down 1 33 YKL176C LST4 involved in regulated secretion/recycling of nitrogen regulated permeases M[51] ...WGTGACg. Novel: Sum1 down 1 33 YGL249W ZIP2 involved in meiotic recombination and disjunction M[51] ...WGTGACg. Novel: Sum1 down 1 33 YOL141W PPM2 carboxy methyl transferase; homolog of PPM1 M[51] ...WGTGACg. Novel: Sum1 down 1 33 YPR093C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 33 YKL128C PMU1 Phospo-mutase homolog M[51] ...WGTGACg. Novel: Sum1 down 1 33 YAL022C FUN26 predicted membrane protein M[51] ...WGTGACg. Novel: Sum1 down 1 33 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[51] ...WGTGACg. Novel: Sum1 down 1 33 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[51] ...WGTGACg. Novel: Sum1 down 1 33 YCL016C DCC1 M[51] ...WGTGACg. Novel: Sum1 down 1 33 YOR371C KRH2 Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 33 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[51] ...WGTGACg. Novel: Sum1 down 1 33 YAL043C PTA1 pre-tRNA processing M[51] ...WGTGACg. Novel: Sum1 down 1 33 YLR410W VIP1 Homologous to S. pombe asp1+ M[51] ...WGTGACg. Novel: Sum1 down 1 33 YBL071W-A Similar to Hemiascomycetous yeast protein (FEBS Lett. 487(1): 31-36 (2000)). M[51] ...WGTGACg. Novel: Sum1 down 1 33 YOR033C EXO1 exonuclease M[51] ...WGTGACg. Novel: Sum1 down 1 33 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[51] ...WGTGACg. Novel: Sum1 down 1 33 YKL045W PRI2 p58 polypeptide of DNA primase M[51] ...WGTGACg. Novel: Sum1 down 1 32 YDR034W-B Similar to probable membrane protein YDR210W and others; Similar to YBR016W M[51] ...WGTGACg. Novel: Sum1 down 1 32 YJR106W ECM27 (putative) involved in cell wall biogenesis M[51] ...WGTGACg. Novel: Sum1 down 1 32 YPL176C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 32 YHR202W Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 32 YHR203C RPS4B Ribosomal protein S4B (YS6) (rp5) (S7B) M[51] ...WGTGACg. Novel: Sum1 down 1 32 YDR408C ADE8 glycinamide ribotide transformylase M[51] ...WGTGACg. Novel: Sum1 down 1 32 YBR252W DUT1 dUTP pyrophosphatase (dUTPase) M[51] ...WGTGACg. Novel: Sum1 down 1 32 YDL147W RPN5 Subunit of the regulatory particle of the proteasome M[51] ...WGTGACg. Novel: Sum1 down 1 31 YKL039W PTM1 Putative membrane protein M[51] ...WGTGACg. Novel: Sum1 down 1 31 YEL060C PRB1 vacuolar protease B M[51] ...WGTGACg. Novel: Sum1 down 1 31 YER065C ICL1 isocitrate lyase M[51] ...WGTGACg. Novel: Sum1 down 1 31 YGL229C SAP4 Sit4 protein phosphatase-associated protein M[51] ...WGTGACg. Novel: Sum1 down 1 31 YJL107C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 31 YGL077C HNM1 Transporter (permease) for choline and nitrogen mustard; share homology with UGA4 M[51] ...WGTGACg. Novel: Sum1 down 1 30 YBR166C TYR1 Prephenate dehydrogenase (NADP+) M[51] ...WGTGACg. Novel: Sum1 down 1 30 YBR165W UBS1 positive regulator of CDC34, involved in ubiquitin-mediated degradation M[51] ...WGTGACg. Novel: Sum1 down 1 30 YBL034C STU1 component of the mitotic spindle M[51] ...WGTGACg. Novel: Sum1 down 1 30 YMR310C Hypothetical ORF M[51] ...WGTGACg. Novel: Sum1 down 1 30 YGL008C PMA1 plasma membrane H+-ATPase M[51] M[52] .RTCCCTV Novel: No cat down 1 40 YEL046C GLY1 Threonine Aldolase M[52] .RTCCCTV Novel: No cat down 1 40 YGR124W ASN2 asparagine synthetase M[52] .RTCCCTV Novel: No cat down 1 40 YDL144C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 40 YNL023C FAP1 Transcription factor homolog; similarity to Drosophila melanogaster shuttle craft protein; similarity to human NFX1 protein; similarity to human DNA-binding protein tenascin M[52] .RTCCCTV Novel: No cat down 1 40 YKL059C MPE1 Protein required for cell viability M[52] .RTCCCTV Novel: No cat down 1 40 YOL095C HMI1 mitochondrial DNA helicase (putative) M[52] .RTCCCTV Novel: No cat down 1 40 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[52] .RTCCCTV Novel: No cat down 1 40 YLR091W Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 39 YJL099W CHS6 involved in chitin biosynthesis M[52] .RTCCCTV Novel: No cat down 1 39 YOR337W TEA1 Ty1 enhancer activator M[52] .RTCCCTV Novel: No cat down 1 39 YLL022C HIF1 interacts with histone acetyltransferase M[52] .RTCCCTV Novel: No cat down 1 39 YPR118W Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 39 YJL047C RTT101 Regulator of Ty1 Transposition M[52] .RTCCCTV Novel: No cat down 1 39 YMR201C RAD14 human xeroderma pigmentosum group A DNA repair gene homolog M[52] .RTCCCTV Novel: No cat down 1 39 YMR200W ROT1 putative membrane protein M[52] .RTCCCTV Novel: No cat down 1 39 YDR086C SSS1 endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex M[52] .RTCCCTV Novel: No cat down 1 39 YLR412W Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 39 YBR067C TIP1 cell wall mannoprotein M[52] .RTCCCTV Novel: No cat down 1 39 YHR096C HXT5 hexose transporter M[52] .RTCCCTV Novel: No cat down 1 39 YJL138C TIF2 translation initiation factor eIF4A M[52] .RTCCCTV Novel: No cat down 1 39 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[52] .RTCCCTV Novel: No cat down 1 39 YGL037C PNC1 pyrazinamidase and nicotinamidase M[52] .RTCCCTV Novel: No cat down 1 39 YOR048C RAT1 RNA trafficking protein; transcription activator M[52] .RTCCCTV Novel: No cat down 1 39 YGL254W FZF1 putative transcription factor, has five zinc fingers M[52] .RTCCCTV Novel: No cat down 1 39 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[52] .RTCCCTV Novel: No cat down 1 39 YHR009C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 39 YBL071W-A Similar to Hemiascomycetous yeast protein (FEBS Lett. 487(1): 31-36 (2000)). M[52] .RTCCCTV Novel: No cat down 1 39 YDR267C Protein required for cell viability M[52] .RTCCCTV Novel: No cat down 1 38 YOL082W CVT19 CVT20 M[52] .RTCCCTV Novel: No cat down 1 38 YCL014W BUD3 involved in bud site selection M[52] .RTCCCTV Novel: No cat down 1 38 YCL011C GBP2 Protein with RNA recognition motifs M[52] .RTCCCTV Novel: No cat down 1 38 YPR145W ASN1 asparagine synthetase M[52] .RTCCCTV Novel: No cat down 1 38 YPR147C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 38 YIL123W SIM1 (putative) invovled in control of DNA replication M[52] .RTCCCTV Novel: No cat down 1 38 YOL047C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 38 YAL020C ATS1 similarity to human RCC1 protein M[52] .RTCCCTV Novel: No cat down 1 38 YBL066C SEF1 putative transcription factor M[52] .RTCCCTV Novel: No cat down 1 38 YGR210C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 38 YCL016C DCC1 M[52] .RTCCCTV Novel: No cat down 1 37 YDR277C MTH1 Protein is 61% identical to Msn3p M[52] .RTCCCTV Novel: No cat down 1 37 YMR107W Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 37 YBL074C AAR2 MATa1-mRNA splicing factor M[52] .RTCCCTV Novel: No cat down 1 37 YNL077W Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 37 YJL145W SFH5 M[52] .RTCCCTV Novel: No cat down 1 36 YAL031C FUN21 FUN21 M[52] .RTCCCTV Novel: No cat down 1 36 YKL025C PAN3 76-kDa subunit of Pab1p-dependent poly(A) ribonuclease (PAN) M[52] .RTCCCTV Novel: No cat down 1 36 YNL263C YIF1 Similar to NADH dehydrogenases M[52] .RTCCCTV Novel: No cat down 1 35 YPR093C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 34 YPR015C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 34 YMR132C Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 34 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[52] .RTCCCTV Novel: No cat down 1 33 YOR091W Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 33 YDR163W CWC15 Hypothetical ORF M[52] .RTCCCTV Novel: No cat down 1 33 YDR164C SEC1 (putative) SNARE docking complex subunit M[52] M[53] YTCGTTTAGG Novel: lipid metabolism down 3 132 YHR008C SOD2 Manganese-containing superoxide dismutase M[53] YTCGTTTAGG Novel: lipid metabolism down 2 100 YDR212W TCP1 chaperonin subunit alpha M[53] YTCGTTTAGG Novel: lipid metabolism down 2 89 YGR178C PBP1 interacts with poly(A)-binding protein M[53] YTCGTTTAGG Novel: lipid metabolism down 2 87 YNL191W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 2 82 YMR016C SOK2 displays homologies to several transcription factors M[53] YTCGTTTAGG Novel: lipid metabolism down 2 75 YGR059W SPR3 septin protein involved in sporulation M[53] YTCGTTTAGG Novel: lipid metabolism down 2 65 YPR145W ASN1 asparagine synthetase M[53] YTCGTTTAGG Novel: lipid metabolism down 2 65 YPR147C Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 64 YHR189W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 63 YCL037C SRO9 RNA binding protein with La motif M[53] YTCGTTTAGG Novel: lipid metabolism down 1 56 YBL105C PKC1 Protein Kinase C M[53] YTCGTTTAGG Novel: lipid metabolism down 1 52 YJL197W UBP12 ubiquitin carboxyl-terminal hydrolase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 52 YJL196C ELO1 Elongation enzyme 1 M[53] YTCGTTTAGG Novel: lipid metabolism down 1 52 YGL157W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 50 YIL043C CBR1 cytochrome b reductase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 49 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[53] YTCGTTTAGG Novel: lipid metabolism down 1 49 YER013W PRP22 helicase-like protein M[53] YTCGTTTAGG Novel: lipid metabolism down 1 49 YGR248W SOL4 similar to SOL3 M[53] YTCGTTTAGG Novel: lipid metabolism down 1 48 YNL023C FAP1 Transcription factor homolog; similarity to Drosophila melanogaster shuttle craft protein; similarity to human NFX1 protein; similarity to human DNA-binding protein tenascin M[53] YTCGTTTAGG Novel: lipid metabolism down 1 48 YNL054W VAC7 Integral vacuolar membrane protein M[53] YTCGTTTAGG Novel: lipid metabolism down 1 47 YPR118W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 45 YLR412W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 44 YBR199W KTR4 Putative alpha-1,2-mannosyltransferase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 43 YLR426W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 43 YDR119W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 43 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 42 YGR155W CYS4 Cystathionine beta-synthase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 42 YNL052W COX5A Cytochrome-c oxidase chain Va M[53] YTCGTTTAGG Novel: lipid metabolism down 1 42 YGR049W SCM4 suppressor of cdc4 mutations M[53] YTCGTTTAGG Novel: lipid metabolism down 1 42 YLR307W CDA1 Chitin Deacetylase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 42 YNL091W NST1 Negative affector of Salt tolerance M[53] YTCGTTTAGG Novel: lipid metabolism down 1 41 YLR352W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 41 YMR316W DIA1 may be involved in invasive growth, pseudohyphal growth M[53] YTCGTTTAGG Novel: lipid metabolism down 1 40 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YIL049W DFG10 involved in filamentous growth M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YLR267W BOP2 Bypass of PAM1 M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YGL126W SCS3 involved in inositol biosynthesis M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YMR219W ESC1 involved in silencing M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YKL045W PRI2 p58 polypeptide of DNA primase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YGL012W ERG4 Sterol C-24 reductase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 39 YGL011C SCL1 Proteasome subunit YC7alpha/Y8 (protease yscE subunit 7) M[53] YTCGTTTAGG Novel: lipid metabolism down 1 38 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[53] YTCGTTTAGG Novel: lipid metabolism down 1 38 YMR010W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 36 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[53] YTCGTTTAGG Novel: lipid metabolism down 1 36 YOR035C SHE4 Required for mother cell-specific HO expression M[53] YTCGTTTAGG Novel: lipid metabolism down 1 35 YJL158C CIS3 Protein with homology to Hsp150p and Pir1p, Pir2p, and Pir3p M[53] YTCGTTTAGG Novel: lipid metabolism down 1 35 YJL159W HSP150 Heat shock protein, secretory glycoprotein M[53] YTCGTTTAGG Novel: lipid metabolism down 1 35 YBR067C TIP1 cell wall mannoprotein M[53] YTCGTTTAGG Novel: lipid metabolism down 1 34 YER159C BUR6 Transcriptional regulator which functions in modulating the activity of the general transcription machinery in vivo M[53] YTCGTTTAGG Novel: lipid metabolism down 1 34 YGR239C PEX21 Peroxin Pex21p M[53] YTCGTTTAGG Novel: lipid metabolism down 1 34 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[53] YTCGTTTAGG Novel: lipid metabolism down 1 33 YPR015C Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 33 YCR068W CVT17 lipase (putative) M[53] YTCGTTTAGG Novel: lipid metabolism down 1 32 YBR071W Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 32 YOL121C RPS19A 40S ribosomal protein S19A (S16aA) (rp55A) (YS16A) M[53] YTCGTTTAGG Novel: lipid metabolism down 1 31 YDR454C GUK1 guanylate kinase M[53] YTCGTTTAGG Novel: lipid metabolism down 1 31 YJR011C Hypothetical ORF M[53] YTCGTTTAGG Novel: lipid metabolism down 1 31 YDR517W GRH1 Yeast homologue of mammalian GRASP proteins, also localised to the Golgi apparatus. M[53] YTCGTTTAGG Novel: lipid metabolism down 1 30 YJL062W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[53] M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 2 67 YMR147W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 2 62 YPL176C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 2 61 YNR052C POP2 Putative transcription factor M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YOL104C NDJ1 involved in meiotic chromosome segregation M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YDR098C GRX3 Protein with glutaredoxin activity M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YGR173W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YGR174C CBP4 ubiquinol--cytochrome-c reductase assembly factor M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YIL021W RPB3 45 kDa subunit of RNA polymerase II M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YIL020C HIS6 phosphoribosyl-5-amino-1-phosphoribosyl-4-imidazolecarboxiamide isomerase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YMR237W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YGR086C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YJR051W OSM1 osmotic growth protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YDR030C RAD28 involved in DNA repair, has WD repeats M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YER014W HEM14 protoporphyrinogen oxidase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YIL049W DFG10 involved in filamentous growth M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YGR112W SHY1 mitochondrial protein with homology to the mammalian SURF-1 gene M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YPR159W KRE6 potential beta-glucan synthase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YFR017C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 36 YFR033C QCR6 ubiquinol-cytochrome c oxidoreductase subunit 6 (17 kDa) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YKL094W YJU3 Product of gene unknown M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YJR130C STR2 Cystathionine gamma-synthase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YDR515W SLF1 RNA binding protein with La motif M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YDR516C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YER053C sequence similarity to mitochondrial phosphate transporters M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YKR085C MRPL20 22.3 kDa mitochondrial ribosomal large subunit protein YmL20; homologous to L17 of E. coli M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YFR011C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YFR010W UBP6 (putative) ubiquitin-specific protease M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YGL143C MRF1 Mitochondrial polypeptide chain release factor M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YOR035C SHE4 Required for mother cell-specific HO expression M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YMR117C SPC24 component of spindle pole M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YNL196C SLZ1 Sporulation-specific protein with a leucine zipper motif M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YGL008C PMA1 plasma membrane H+-ATPase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YDR264C AKR1 Ankyrin repeat-containing protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YJR054W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YNL191W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YMR099C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YKL127W PGM1 phosphoglucomutase, minor isoform M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YEL019C MMS21 involved in DNA repair M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YGL249W ZIP2 involved in meiotic recombination and disjunction M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YDR336W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YGR239C PEX21 Peroxin Pex21p M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 35 YNL095C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YER110C KAP123 Karyopherin beta 4 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPL089C RLM1 serum response factor-like protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YOL120C RPL18A Ribosomal protein L18A (rp28A) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YGL254W FZF1 putative transcription factor, has five zinc fingers M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YIL043C CBR1 cytochrome b reductase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YIR001C SGN1 Contains one RNA recognition (RRM) domain M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YIL001W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YOR113W AZF1 similar to Zn-finger transcription factors M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YHR197W Protein required for cell viability M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YHR198C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YKL040C NFU1 Nifu-like protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YKL041W VPS24 involved in secretion M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPR015C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPL026C SKS1 serine/threonine protein kinase homologous to Ran1p M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YPL027W SMA1 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YOR179C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YJL034W KAR2 Homologue of mammalian BiP (GPR78) protein; member of the HSP70 gene family M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YDR390C UBA2 similar to ubiquitin activating enzyme (E1) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YDR389W SAC7 GTPase activating protein (GAP) for RHO1 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YLR401C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YDR208W MSS4 Phosphatidylinositol 4-phosphate kinase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YMR001C CDC5 protein kinase which functions at the G(sub)2/M boundary M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 34 YML001W YPT7 GTP-binding protein, rab family M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YML109W ZDS2 Zds1 homolog M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YGR255C COQ6 COQ6 monooxygenase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YGR254W ENO1 enolase I M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YPL063W Protein required for cell viability M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YCR065W HCM1 Transcription factor (fork head domain) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YMR081C ISF1 involved in mitochondrial RNA splicing M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YOL119C MCH4 monocarboxylate permease homologue M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YAL062W GDH3 NADP-linked glutamate dehydrogenase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YOR123C LEO1 Product of gene unknown M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YCL011C GBP2 Protein with RNA recognition motifs M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YCL014W BUD3 involved in bud site selection M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YMR160W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YDR506C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YLR396C VPS33 involved in vacuolar protein targeting M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YDR177W UBC1 ubiquitin-conjugating enzyme M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YHR096C HXT5 hexose transporter M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YOR313C SPS4 sporulation-specific protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YNL271C BNI1 contains formin homology domains; homologous to BNR1 (BNI1 related protein) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YER028C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YLR219W MSC3 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 33 YJR129C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YHR142W CHS7 The seventh gene identified that is involved in chitin synthesis; involved in Chs3p export from the ER M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YMR192W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YOR370C MRS6 Rab geranylgeranyltransferase regulatory subunit M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YKR010C TOF2 topoisomerase I interacting factor 2 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YOR001W RRP6 involved in 5.8S rRNA processing M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YHR094C HXT1 High-affinity hexose (glucose) transporter M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YPL221W BOP1 Bypass of PAM1 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YER044C-A MEI4 mRNA is meiosis-specific and has 88 bp intron at 5' end spliced independently of MER1. M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YPR122W AXL1 putative homolog of human insulin-degrading endoprotease M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YJL149W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YGL135W RPL1B Ribosomal protein L1B M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YMR262W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YHR097C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YBR067C TIP1 cell wall mannoprotein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YML094W GIM5 bovine prefoldin subunit 5 homolog (putative) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YDL197C ASF2 Anti-silencing protein, involved in transcription M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 32 YOL097C WRS1 cytoplasmic tryptophanyl-tRNA synthetase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YOR355W GDS1 involved in nuclear control of mitochondria M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YHR178W STB5 Zinc finger (6-Cys) M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YPL222W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YDL053C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YOL138C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YHR165C PRP8 U5 snRNP and spliceosome component M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YER068W MOT2 putative zinc finger protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YOR204W DED1 ATP-dependent RNA helicase of DEAD box family M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YOR205C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YGR016W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YMR308C PSE1 Karyopherin M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YMR307W GAS1 cell surface glycoprotein 115-120 kDa M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YCR009C RVS161 Reduced viability on starvation protein RVS161 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YCR008W SAT4 Ser/Thr protein kinase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YML082W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YML081C-A ATP18 protein associated to the ATP synthase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YCL055W KAR4 transcription factor involved in karyogamy M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YOR307C SLY41 homolog of chloroplast phosphate transporter M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YCL044C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YGR013W SNU71 U1 snRNP protein M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 31 YDR210W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YDL121C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YDL122W UBP1 Ubiquitin-specific protease M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YDR176W NGG1 transcription factor; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YBL064C EC 1.11.1.- M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YPR151C Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YPR149W NCE102 Involved in secretion of proteins that lack classical secretory signal sequences M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YMR010W Hypothetical ORF M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[54] TYCGKRM Novel: SOK2 (hits tRNA) down 1 30 YMR266W RSN1 M[54] M[55] .CGC..............BCGB Novel: No cat down 1 38 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[55] .CGC..............BCGB Novel: No cat down 1 38 YOR337W TEA1 Ty1 enhancer activator M[55] .CGC..............BCGB Novel: No cat down 1 38 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[55] .CGC..............BCGB Novel: No cat down 1 38 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[55] .CGC..............BCGB Novel: No cat down 1 38 YER158C Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 38 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[55] .CGC..............BCGB Novel: No cat down 1 38 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[55] .CGC..............BCGB Novel: No cat down 1 38 YBR052C Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 38 YJR115W Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 38 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[55] .CGC..............BCGB Novel: No cat down 1 38 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[55] .CGC..............BCGB Novel: No cat down 1 38 YHR182W Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 38 YOL045W Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 38 YBR050C REG2 putative Glc7 regulatory subunit M[55] .CGC..............BCGB Novel: No cat down 1 37 YBR289W SNF5 subunit of the chromatin remodeling Snf/Swi complex M[55] .CGC..............BCGB Novel: No cat down 1 37 YMR084W Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 37 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[55] .CGC..............BCGB Novel: No cat down 1 37 YLR035C MLH2 MutL Homolog M[55] .CGC..............BCGB Novel: No cat down 1 36 YER008C SEC3 SEC3 encodes the 144 kD and 91 kD components of the Exocyst complex; the 91 kD component is a C-terminal proteolytic breakdown product of full length Sec3p M[55] .CGC..............BCGB Novel: No cat down 1 36 YDR482C CWC21 YDR482C M[55] .CGC..............BCGB Novel: No cat down 1 36 YBR062C Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 36 YOL020W TAT2 Tryptophan permease, high affinity M[55] .CGC..............BCGB Novel: No cat down 1 36 YHR165C PRP8 U5 snRNP and spliceosome component M[55] .CGC..............BCGB Novel: No cat down 1 36 YMR198W CIK1 spindle pole body associated protein M[55] .CGC..............BCGB Novel: No cat down 1 35 YDR208W MSS4 Phosphatidylinositol 4-phosphate kinase M[55] .CGC..............BCGB Novel: No cat down 1 35 YFR031C-A RPL2A Ribosomal protein L2A (L5A) (rp8) (YL6) M[55] .CGC..............BCGB Novel: No cat down 1 35 YIL146C ECM37 (putative) involved in cell wall biogenesis M[55] .CGC..............BCGB Novel: No cat down 1 35 YER041W YEN1 M[55] .CGC..............BCGB Novel: No cat down 1 33 YIL043C CBR1 cytochrome b reductase M[55] .CGC..............BCGB Novel: No cat down 1 31 YDR476C Hypothetical ORF M[55] .CGC..............BCGB Novel: No cat down 1 31 YOR377W ATF1 Alcohol acetyltransferase M[55] .CGC..............BCGB Novel: No cat down 1 31 YPR139C VPS66 M[55] M[56] TWCCCCM. Known: Mig1 + Facilitators down 2 72 YOR179C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 2 64 YDL078C MDH3 malate dehydrogenase M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 43 YPL247C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YGR161C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YJL200C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YJL201W ECM25 (putative) involved in cell wall biogenesis M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YML053C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YAL037W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YAL036C FUN11 similar to Xenopus GTP-binding protein DRG M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YJR021C REC107 ds break formation complex subunit M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YMR205C PFK2 phosphofructokinase beta subunit M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YDR086C SSS1 endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YFR048W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 42 YOR355W GDS1 involved in nuclear control of mitochondria M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 41 YNR053C NOG2 Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 41 YDL195W SEC31 Component (p150) of COPII coat of secretory pathway vesicles M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 41 YDR113C PDS1 42-kDa nuclear protein M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 41 YKL094W YJU3 Product of gene unknown M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 41 YHR094C HXT1 High-affinity hexose (glucose) transporter M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 41 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YEL020C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YEL020W-A TIM9 mitochondrial inner membrane translocase M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YNL300W TOS6 Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YNL010W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YJR007W SUI2 Translation initiation factor eIF-2 alpha subunit M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YPL133C RDS2 Transcriptional regulator M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 40 YMR017W SPO20 DBF2 Interacting Protein; SNAP 25 homolog M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 39 YCR011C ADP1 Active transport ATPase M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 39 YNL092W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 38 YNL204C SPS18 Transcription factor M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 38 YMR253C Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 38 YLR024C UBR2 ubiquitin-protein ligase (E3) M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 38 YER066W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 38 YNL279W PRM1 pheromone-regulated membrane protein M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 37 YDL019C OSH2 Oxysterol Binding Protein M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 37 YMR010W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 37 YOR012W Hypothetical ORF M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 37 YPL231W FAS2 alpha subunit of fatty acid synthase M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 36 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 35 YOR125C CAT5 may encode a protein involved in one or more monoxygenase or hydroxylase steps of ubiquinone biosynthesis M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 35 YLL038C ENT4 Ent4p M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 34 YHR096C HXT5 hexose transporter M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 33 YCR063W BUD31 M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 32 YBR133C HSL7 regulator of Swe1p kinase M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 31 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[56] TWCCCCM. Known: Mig1 + Facilitators down 1 31 YOR373W NUD1 spindle pole body protein M[56] M[57] CGGC..MG.......CGC Known: Gal4 down 2 74 YEL020C Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 2 74 YEL020W-A TIM9 mitochondrial inner membrane translocase M[57] CGGC..MG.......CGC Known: Gal4 down 1 57 YAL022C FUN26 predicted membrane protein M[57] CGGC..MG.......CGC Known: Gal4 down 1 51 YAL043C PTA1 pre-tRNA processing M[57] CGGC..MG.......CGC Known: Gal4 down 1 48 YJL157C FAR1 Cdc28p kinase inhibitor M[57] CGGC..MG.......CGC Known: Gal4 down 1 45 YOL020W TAT2 Tryptophan permease, high affinity M[57] CGGC..MG.......CGC Known: Gal4 down 1 44 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[57] CGGC..MG.......CGC Known: Gal4 down 1 44 YIR036C Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 44 YLR401C Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 43 YBR067C TIP1 cell wall mannoprotein M[57] CGGC..MG.......CGC Known: Gal4 down 1 42 YDR156W RPA14 RNA polymerase I subunit A14 M[57] CGGC..MG.......CGC Known: Gal4 down 1 42 YEL046C GLY1 Threonine Aldolase M[57] CGGC..MG.......CGC Known: Gal4 down 1 41 YKL086W Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 40 YOR134W BAG7 GTPase activating protein (GAP) M[57] CGGC..MG.......CGC Known: Gal4 down 1 40 YOL082W CVT19 CVT20 M[57] CGGC..MG.......CGC Known: Gal4 down 1 38 YML112W CTK3 CTD kinase-I gamma subunit M[57] CGGC..MG.......CGC Known: Gal4 down 1 37 YHR097C Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 37 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[57] CGGC..MG.......CGC Known: Gal4 down 1 37 YDR212W TCP1 chaperonin subunit alpha M[57] CGGC..MG.......CGC Known: Gal4 down 1 36 YBL013W FMT1 Methionyl-tRNA Transformylase M[57] CGGC..MG.......CGC Known: Gal4 down 1 35 YCL037C SRO9 RNA binding protein with La motif M[57] CGGC..MG.......CGC Known: Gal4 down 1 35 YKR041W Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 34 YHR176W Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 33 YDR498C SEC20 membrane glycoprotein, sorted by HDEL retrieval system M[57] CGGC..MG.......CGC Known: Gal4 down 1 31 YMR107W Hypothetical ORF M[57] CGGC..MG.......CGC Known: Gal4 down 1 31 YGR156W PTI1 M[57] CGGC..MG.......CGC Known: Gal4 down 1 31 YLR299W ECM38 gamma-glutamyltransferase homolog M[57] CGGC..MG.......CGC Known: Gal4 down 1 31 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[57] M[58] CCGS.....GVC Novel: No cat down 2 64 YLL028W TPO1 polyamine transport protein M[58] CCGS.....GVC Novel: No cat down 1 41 YDR156W RPA14 RNA polymerase I subunit A14 M[58] CCGS.....GVC Novel: No cat down 1 40 YDR061W Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 40 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[58] CCGS.....GVC Novel: No cat down 1 40 YGR096W Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 40 YER011W TIR1 Cold-shock induced protein of the Srp1p/Tip1p family of serine-alanine-rich proteins M[58] CCGS.....GVC Novel: No cat down 1 40 YER158C Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 40 YER157W SEC34 Sec34p is a 92.5 kD protein that is primarily cytosolic but a small pool associates with the particulate fraction upon centrifugation at 150,000xg. Sec34p stably associates with Sec35p, a protein implicated in vesicle docking, to form a multiprotein complex of approximately 480kD. M[58] CCGS.....GVC Novel: No cat down 1 40 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[58] CCGS.....GVC Novel: No cat down 1 40 YDL181W INH1 ATPase inhibitor M[58] CCGS.....GVC Novel: No cat down 1 40 YKR041W Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 40 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[58] CCGS.....GVC Novel: No cat down 1 40 YDR119W Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 40 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[58] CCGS.....GVC Novel: No cat down 1 40 YKL098W Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 40 YPL063W Protein required for cell viability M[58] CCGS.....GVC Novel: No cat down 1 40 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[58] CCGS.....GVC Novel: No cat down 1 40 YDR246W TRS23 TRAPP subunit of 23 kDa M[58] CCGS.....GVC Novel: No cat down 1 39 YGL126W SCS3 involved in inositol biosynthesis M[58] CCGS.....GVC Novel: No cat down 1 39 YIR036C Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 38 YGL073W HSF1 heat shock transcription factor M[58] CCGS.....GVC Novel: No cat down 1 36 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[58] CCGS.....GVC Novel: No cat down 1 36 YKL121W Hypothetical ORF M[58] CCGS.....GVC Novel: No cat down 1 36 YOR134W BAG7 GTPase activating protein (GAP) M[58] CCGS.....GVC Novel: No cat down 1 36 YPR139C VPS66 M[58] CCGS.....GVC Novel: No cat down 1 34 YDR530C APA2 5',5'''-P-1,P-4-tetraphosphate phosphorylase II M[58] CCGS.....GVC Novel: No cat down 1 32 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[58] CCGS.....GVC Novel: No cat down 1 30 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[58] CCGS.....GVC Novel: No cat down 1 30 YOR107W RGS2 GTPase activating protein for Gpa2 M[58] M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 5 167 YBR241C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 136 YIL124W AYR1 1-Acyl dihydroxyacetone phosphate reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 109 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 109 YEL023C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 109 YEL024W RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 107 YDR186C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 105 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 93 YGR146C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 93 YGR145W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 3 92 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 85 YHL034C SBP1 Single-strand nucleic acid binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 83 YOR065W CYT1 Cytochrome c1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 81 YPL029W SUV3 putative ATP-dependent helicase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 81 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 80 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 79 YOL023W IFM1 mitochondrial initiation factor 2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 79 YOL022C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 77 YER177W BMH1 Homolog of mammalian 14-3-3 proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 77 YER119C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 77 YNL083W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 76 YLR421C RPN13 New 26S proteasome subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 76 YLR420W URA4 dihydrooratase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 76 YBL076C ILS1 cytoplasmic isoleucyl-tRNA synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 76 YER089C PTC2 Protein phosphatase type 2C M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 76 YGR049W SCM4 suppressor of cdc4 mutations M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 75 YER113C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 75 YER112W LSM4 U6 snRNA associated protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 74 YCL011C GBP2 Protein with RNA recognition motifs M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 74 YCL014W BUD3 involved in bud site selection M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 73 YKL135C APL2 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 73 YKL137W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 73 YPR133W-A TOM5 Membrane protein involved in protein translocation to the mitochondria M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 73 YHR168W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 73 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 73 YNL002C RLP7 Protein with similarity to ribosomal proteins including Rpl6p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 72 YJL157C FAR1 Cdc28p kinase inhibitor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 72 YHR006W STP2 Zinc finger (Cys(2)-His(2)) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 72 YHR007C ERG11 cytochrome P450 lanosterol 14a-demethylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 72 YIL006W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 72 YLR221C RSA3 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 72 YLR220W CCC1 Possible transmembrane Ca2+ transporter M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 71 YJL062W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 71 YLR248W RCK2 Serine/threonine protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 71 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 71 YHR202W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 71 YHR203C RPS4B Ribosomal protein S4B (YS6) (rp5) (S7B) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 70 YGR054W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 70 YDR086C SSS1 endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 69 YPL191C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 69 YBR204C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 69 YBR203W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 69 YMR234W RNH1 ribonuclease H M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 69 YMR235C RNA1 GTPase activating protein for Gsp1p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 68 YER095W RAD51 RecA homolog; Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 68 YIL135C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 68 YIL136W OM45 45-kDa mitochondrial outer membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 68 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 68 YDL214C PRR2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 67 YDR225W HTA1 Histone H2A (HTA1 and HTA2 code for nearly identical proteins) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 67 YJL047C RTT101 Regulator of Ty1 Transposition M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 67 YGL018C JAC1 member of the 20-kDa J-protein family of co-chaperones; homolog of E. coli Hsc20 co-chaperone protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 67 YGL019W CKB1 beta (38kDa) subunit of casein kinase II (CKII) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 67 YNR037C RSM19 mitochondrial ribosome small subunit component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 67 YJL138C TIF2 translation initiation factor eIF4A M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 66 YMR310C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 66 YDR162C NBP2 interacts with Nap1, which is involved in histone assembly M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 66 YDR161W TCI1 interacts with PP2C M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 66 YDR377W ATP17 ATP synthase subunit f M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 66 YDR378C LSM6 Sm-like protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 65 YER122C GLO3 Zinc-finger-containing protein with similarity to Gcs1p and Sps18p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 65 YER120W SCS2 involved in inositol metabolism, regulator of INO1 expression M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YNR014W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YBR112C CYC8 Transcription regulatory protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YGL126W SCS3 involved in inositol biosynthesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YOR205C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YOR204W DED1 ATP-dependent RNA helicase of DEAD box family M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YBR049C REB1 RNA polymerase I enhancer binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 64 YBR048W RPS11B Ribosomal protein S11B (S18B) (rp41B) (YS12) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 63 YOL058W ARG1 arginosuccinate synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 63 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 63 YGL001C ERG26 C-3 sterol dehydrogenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 63 YGL002W ERP6 p24 protein involved in membrane trafficking M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 62 YKL148C SDH1 flavoprotein subunit of succinate dehydrogenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 62 YML098W TAF13 TFIID subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 62 YML097C VPS9 similar to mammalian ras inhibitors M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 61 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 2 61 YPR037C ERV2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 54 YMR104C YPK2 protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 52 YNR017W MAS6 23 kDa mitochondrial inner membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 52 YNL113W RPC19 subunit common to RNA polymerases I (A) and III (C) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 51 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YDR348C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YDR347W MRP1 37 kDa mitochondrial ribosomal protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YAL020C ATS1 similarity to human RCC1 protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YMR016C SOK2 displays homologies to several transcription factors M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YLR381W CTF3 kinetochore-related protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YLR382C NAM2 mitochondrial leucyl tRNA synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YDR152W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 49 YDR153C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 48 YBR151W APD1 Actin Patches Distal M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 48 YJL063C MRPL8 Mitochondrial ribosomal protein MRPL8 (YmL8) (E. coli L17) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 48 YKR064W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 48 YKR065C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YMR024W MRPL3 Mitochondrial ribosomal protein MRPL3 (YmL3) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YGR121C MEP1 ammonia permease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YDR116C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YDR115W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YPL215W CBP3 involved in cytochrome-c reductase assembly M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 47 YPL214C THI6 TMP pyrophosphorylase, hydroxyethylthiazole kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 46 YKR052C MRS4 mitochondrial carrier protein, highly homologous to Mrs3p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 46 YKR051W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 46 YKL192C ACP1 mitochondrial acyl carrier protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YGR202C PCT1 phosphorylcholine transferase; or cholinephosphate cytidylyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YJR101W RSM26 mitochondrial ribosome small subunit component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YJR102C VPS25 vacuolar protein sorting (putative) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YLL005C SPO75 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YLL006W MMM1 mitochondrial outer membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YLR293C GSP1 GTP-binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YBR067C TIP1 cell wall mannoprotein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YGR068C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 45 YMR296C LCB1 Probable component of serine palmitoyltransferase, which catalyzes the first step in biosynthesis of long-chain sphingolipids M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YMR067C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YMR066W SOV1 (putative) involved in respiration M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YER085C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YBR200W BEM1 contains two SH3 domains M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YNL186W UBP10 predicted to encode a ubiquitin-processing protease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YNL185C MRPL19 mitochondrial ribosomal protein of the large subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YGR207C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YGR206W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 44 YNL080C Deletion causes slight growth defect, similar to U. maydis myp1 protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YPR191W QCR2 40 kDa ubiquinol cytochrome-c reductase core protein 2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YGR086C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YGL068W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YLR058C SHM2 serine hydroxymethyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YLR057W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YOL062C APM4 Clathrin associated protein, medium subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YHR187W IKI1 involved in sensitivity to pGKL killer toxin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YHR188C GPI16 YHR188C M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YPR174C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YHR083W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YGR135W PRE9 proteasome component Y13 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YHR037W PUT2 delta-1-pyrroline-5-carboxylate dehydrogenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YLR373C VID22 vacuole import and degradation M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 43 YLR372W SUR4 involved in fatty acid biosynthesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YNL260C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YNL261W ORC5 Fifth largest subunit of origin recognition complex; contains possible ATP-binding site M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YDR205W MSC2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YLR295C ATP14 ATP synthase subunit h M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YHR123W EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YGL078C DBP3 ATP-dependent RNA helicase CA3 of the DEAD/DEAH box family M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YGL079W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YJL208C NUC1 mitochondrial nuclease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YJL209W CBP1 involved in control of mRNA stablility M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YOR134W BAG7 GTPase activating protein (GAP) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YGL125W MET13 putative methylenetetrahydrofolate reductase (mthfr) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YGL124C MON1 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YPL004C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YPL005W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YNR051C BRE5 protein of unknown function M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 42 YPL132W COX11 mitochondrial membrane protein required for insertion of Cu(B) and magnesium during assembly of cytochrome c oxidase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YML048W GSF2 involved in glucose repression M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YML047C PRM6 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YPL139C UME1 Transcriptional modulator M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YBR056W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YBR057C MUM2 similar to ubiquitin C-terminal hydrolase, involved in meiosis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YBR003W COQ1 hexaprenyl pyrophosphate synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YBR004C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDR451C YHP1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDR450W RPS18A Ribosomal protein S18A M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDR214W AHA1 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YCL008C STP22 homologous to mouse and human Tsg101 tumor susceptibility genes M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDR498C SEC20 membrane glycoprotein, sorted by HDEL retrieval system M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YKL062W MSN4 zinc finger protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YJR065C ARP3 involved in the function of the actin cytoskeleton M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YJR064W CCT5 subunit of chaperonin subunit epsilon M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YBL022C PIM1 mitochondrial ATP-dependent protease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDL205C HEM3 phorphobilinogen deaminase (uroporphyrinogen synthase), the third step in heme biosynthesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDL206W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDL059C RAD59 The RAD59 gene product has homology to the Rad52 protein. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YDL060W TSR1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YHR091C MSR1 Arginyl-tRNA synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 41 YGL027C CWH41 glucosidase I M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YBR282W MRPL27 Mitochondrial ribosomal protein MRPL27 (YmL27) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YBR283C SSH1 Probable SEC61 protein homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YDR493W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YKL007W CAP1 alpha subunit of capping protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YKL006C-A SFT1 intra-Golgi v-SNARE M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YFR018C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YMR241W YHM2 DNA-binding protein, mtDNA stabilizing protein, mitochondrial inner membrane protein with low homology to RIM2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YMR242C RPL20A Ribosomal protein L20A (L18A) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YLL051C FRE6 similar to FRE2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YAL026C DRS2 Membrane-spanning Ca-ATPase (P-type),member of the cation transport (E1-E2) ATPases M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YAL027W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YPR124W CTR1 Copper transport protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YOL017W ESC8 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YOL016C CMK2 Calmodulin-dependent protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YBR172C SMY2 Kinesin-related protein suppressing myosin defects (MYO2) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YBR171W SEC66 glycoprotein complexed with Sec62p and Sec63p in the Sec63 complex, an integral endoplasmic reticulum membrane protein complex required for translocation of presecretory proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YOR087W YVC1 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YOR089C VPS21 small GTP-binding protein; geranylgeranylated; geranylgeranylation required for membrane association; also involved in endocytosis post vesicle internalization M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YMR315W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YNL066W SUN4 Protein involved in the aging process M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YPR047W MSF1 alpha subunit of yeast mitochondrial phenylalanyl-tRNA synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YMR119W ASI1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YMR120C ADE17 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YBL005W PDR3 Pleiotropic drug resistance protein 3 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YFR032C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YGL169W SUA5 translation initiation protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YGL167C PMR1 Ca++-Pump, ATPase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YKR005C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YDR456W NHX1 Na+/H+ exchanger M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YFL016C MDJ1 DnaJ homolog involved in mitochondrial biogenesis and protein folding M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YPR024W YME1 Mitochondrial member of the CDC48/PAS1/SEC18 family of ATPases M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YPR025C CCL1 novel cyclin gene; encodes subunits of TFIIK, a subcomplex of transcription factor TFIIH M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YER043C SAH1 putative S-adenosyl-L-homocysteine hydrolase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 40 YER042W MXR1 peptide methionine sulfoxide reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YOR028C CIN5 bZIP protein, can activate transcription from a promoter containing a Yap recognition site M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YOR027W STI1 Heat shock protein also induced by canavanine and entry into stationary phase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YGR036C CAX4 CAX4p contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YLR390W ECM19 involved in cell wall biogenesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YPL204W HRR25 casein kinase I isoform M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YMR181C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YHR193C EGD2 GAL4 enhancer protein, homolog of human alpha NAC subunit of the nascent-polypeptide-associated complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YHR192W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YEL007W TOS9 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YDR494W RSM28 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YDR495C VPS3 vacuolar protein targeting protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YGL208W SIP2 component of Snf1 protein complex involved in response to glucose starvation M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YKL139W CTK1 alpha subunit of the kinase which phosphorylates the RNA polymerase largest subunit CTD (carboxyl-terminal domain) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YKL138C MRPL31 15.5 kDa mitochondrial ribosomal protein YmL31 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YJL210W PEX2 CH3HC4 zinc-binding integral peroxisomal membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YNL281W HCH1 high copy Hsp90 supressor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YNL280C ERG24 sterol C-14 reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YPL032C SVL3 (putative) involved in vacuole function M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YNL225C CNM67 Spindle pole body protein involved in nuclear migration M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YGL183C MND1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YKL090W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YDR122W KIN1 Serine/threonine protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YDR123C INO2 helix-loop-helix protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YKR037C SPC34 component of spindle pole M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YMR321C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YGR248W SOL4 similar to SOL3 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YBL066C SEF1 putative transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YDR155C CPR1 cyclophilin peptidyl-prolyl cis-trans isomerase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YPL176C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YMR112C MED11 14 Kd mediator subunit of RNA polymerase II holoenzyme M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YOL135C MED7 Stoichiometric member of mediator complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YNL099C OCA1 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 39 YNL100W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YJR049C UTR1 involved in ferric reductase activity M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YJR048W CYC1 iso-1-cytochrome c M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YDR167W TAF10 TFIID subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YBR192W RIM2 Probable carrier protein, mitochondrial M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YBR193C MED8 Stoichiometric member of mediator complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YPL028W ERG10 acetoacetyl CoA thiolase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YDR069C DOA4 ubiquitin isopeptidase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YDR068W DOS2 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YEL020C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YEL020W-A TIM9 mitochondrial inner membrane translocase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YGR218W CRM1 Chromosome region maintenance protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YGR220C MRPL9 Mitochondrial ribosomal protein MRPL9 (YmL9) (E. coli L3) (human MRL3) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YFR029W PTR3 regulator of peptide permease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YHR058C MED6 RNA polymerase II mediator subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YHR032W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YNL137C NAM9 putative mitochondrial S4 ribosomal protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YNL138W SRV2 70-kDa adenylyl cyclase-associated protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YPL109C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YBR233W PBP2 Homolog to human hnRNP complex K protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YOR232W MGE1 GrpE homolog, mitochondrial matrix protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YDL004W ATP16 ATP synthase delta subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YLL012W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YNL243W SLA2 transmembrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YBR121C GRS1 Glycyl-tRNA synthase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YKL004W AUR1 involved in phospolipid metabolism M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YKL003C MRP17 Mitochondrial ribosomal protein MRP17 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YGL063W PUS2 pseudouridine synthase 2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YNL085W MKT1 retroviral protease signature protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YNL084C END3 Required for endocytosis and organization of the cytoskeleton M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YBR044C TCM62 mitochondrial protein; (putative) chaperone M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YNL071W LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 38 YBL038W MRPL16 Mitochondrial ribosomal protein MRPL16 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YDL106C PHO2 Homeobox-domain containing transcription fractor which is a positive regulator of PHO5 and other genes. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YDL107W MSS2 cox1 pre-mRNA splicing factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YGL073W HSF1 heat shock transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YLR254C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YLR253W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YDL110C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YLR303W MET17 O-Acetylhomoserine-O-Acetylserine Sulfhydralase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YLR304C ACO1 Aconitase, mitochondrial M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YGR092W DBF2 Serine/threonine protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YOL088C MPD2 protein disulfide isomerase related protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YPR117W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YDL052C SLC1 putative 1-acyl-sn-gylcerol-3-phosphate acyl transferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YKL103C LAP4 vacuolar aminopeptidase ysc1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YBR196C PGI1 Glucose-6-phosphate isomerase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YPR114W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YOR140W SFL1 Transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YOR141C ARP8 actin-related protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YGR252W GCN5 histone acetyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YGR253C PUP2 Proteasome subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YBR136W MEC1 similar to phosphatidylinositol(PI)3-kinases required for DNA damage induced checkpoint responses in G1, S/M, intra S, and G2/M in mitosis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YPL078C ATP4 F(1)F(0)-ATPase complex delta subunit, mitochondrial M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YPL079W RPL21B Ribosomal protein L21B M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YJL128C PBS2 MAP kinase kinase (MEK), may act as a scaffolding protein for Sho1p, Ste11p, and Hog1p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YJL118W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YLR429W CRN1 has homology to the Dictyostelium and human actin-binding protein coronin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YPR056W TFB4 Transcription initiation factor TFIIH subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YKL085W MDH1 mitochondrial malate dehydrogenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YML012W ERV25 vesicle coat component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YML011C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YLR355C ILV5 acetohydroxyacid reductoisomerase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YDR052C DBF4 Regulatory subunit of Cdc7p-Dbf4p kinase complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YER062C HOR2 DL-glycerol-3-phosphatase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YBL030C PET9 mitochondrial ADP/ATP translocator M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 37 YBL031W SHE1 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YCL054W SPB1 Putative methyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YCL052C PBN1 Protease B, nonderepressible form M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YJR080C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YJR078W BNA2 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER059W PCL6 PHO85 cyclin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YKR053C YSR3 DHS-1-P phosphatase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YPR116W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YDR392W SPT3 transcription factor, member of the histone acetyltransferase SAGA complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YIL076W SEC28 epsilon-COP coatomer subunit Sec28p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YIL075C RPN2 RPN2p is a component of the 26S proteosome M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YOL096C COQ3 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YML017W PSP2 (putative) involved in mRNA splicing M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YML016C PPZ1 serine-threonine phosphatase Z M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER141W COX15 cytochrome oxidase assembly factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER142C MAG1 3-methyladenine DNA glycosylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YDR156W RPA14 RNA polymerase I subunit A14 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YBR041W FAT1 Fatty acid transporter M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YBR042C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YLR440C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YLR439W MRPL4 Mitochondrial 60S ribosomal protein L4 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER087C-A SBH1 homologous to Sbh2p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER087W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YMR260C TIF11 Translation initiation factor eIF1A M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YHR059W FYV4 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YHR190W ERG9 squalene synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YHR191C CTF8 (putative) kinetochore protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YNL161W CBK1 Protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YHR109W CTM1 Cytochrome c methyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YPL200W CSM4 Protein required for meiotic chromosome segregation M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YPL199C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YGL245W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YBL072C RPS8A Ribosomal protein S8A (S14A) (rp19) (YS9) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YHR181W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YJR034W PET191 involved in cytochrome c oxidase assembly M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YNL209W SSB2 Heat shock protein of HSP70 family, homolog of SSB1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER031C YPT31 ras-like GTPase, highly homologous to YPT32 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YER030W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YOL026C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YML120C NDI1 NADH dehydrogenase (ubiquinone) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 36 YML121W GTR1 Putative small GTPase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YER022W SRB4 subunit of RNA polymerase II holoenzyme/mediator complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR394W CST9 required for synapsis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR395C COX8 Cytochrome-c oxidase chain VIII M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YPL250C ICY2 interacting with the cytoskeleton M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YBR153W RIB7 Riboflavin biosynthesis protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YBR154C RPB5 25-kDa RNA polymerase subunit (common to polymerases I, II and III) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YMR273C ZDS1 peripheral plasma membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YHR019C DED81 Asparaginyl-tRNA synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YOR157C PUP1 putative proteasome subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YER065C ICL1 isocitrate lyase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR050C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDL236W PHO13 p-nitrophenyl phosphatase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDL235C YPD1 Two-component phosphorelay intermediate M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YGR180C RNR4 Ribonucleotide Reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YHR128W FUR1 UPRTase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YHR129C ARP1 Centractin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR457C NBP1 Nap1p binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR456W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YOR362C PRE10 proteasome component YC1 (protease yscE subunit 1) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDL202W MRPL11 Mitochondrial ribosomal protein MRPL11 (YmL11) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YGL252C RTG2 involved in interorganelle communication between mitochondria, peroxisomes, and nucleus M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YGL253W HXK2 Hexokinase II (PII) (also called Hexokinase B) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YNL091W NST1 Negative affector of Salt tolerance M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YOL012C HTZ1 An evolutionarily conserved member of the histone H2A F/Z family of histone variants M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YKL201C MNN4 involved in mannose metabolism M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR033W MRH1 Membrane protein Related to Hsp30p; Localized by immunofluorescence to cell membranes, primarily the plasma membrane. A punctuate immunofluorescence pattern was observed within cell buds. The nuclear envelope, but not the vacuole or mitochondrial membranes, are also immunostained. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR034C LYS14 transcription factor involved in lysine biosynthesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YMR049C ERB1 conserved eukaryotic protein involved in ribosome biogenesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YMR048W CSM3 Protein required for meiotic chromosome segregation M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YGL187C COX4 subunit IV of cytochrome c oxidase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YHR170W NMD3 cytoplasmic factor required for a late cytoplasmic assembly step of the 60S subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YIL126W STH1 helicase related protein, snf2 homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YML109W ZDS2 Zds1 homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YBL036C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YBL037W APL3 Large subunit of clathrin associated protein complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YPR110C RPC40 RNA polymerase III (C) subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YPR109W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YIL031W ULP2 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YIL030C SSM4 integral nuclear membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YPL100W MAI1 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YPL099C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR003W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR056W ERG3 C-5 sterol desaturase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YCL048W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YCL047C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YNL173C MDG1 Involved in G-protein mediated signal transduction M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YOR178C GAC1 Regulatory subunit for Glc7p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YBR085W AAC3 mitochondrial ADP/ATP translocator M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YBR085C-A Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YNR028W CPR8 Cyclophilin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YNR029C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YLR207W HRD3 involved in HMG-CoA reductase degradation M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR443C SSN2 transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YER051W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YER052C HOM3 Aspartate kinase (L-aspartate 4-P-transferase) (EC 2.7.2.4) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YNL310C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR100W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YDR101C ARX1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YHR002W LEU5 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YHR003C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YIL020C HIS6 phosphoribosyl-5-amino-1-phosphoribosyl-4-imidazolecarboxiamide isomerase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 35 YIL021W RPB3 45 kDa subunit of RNA polymerase II M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YIL019W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDL128W VCX1 vacuolar H+/Ca2+ exchanger M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YML092C PRE8 proteasome component Y7 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YML093W UTP14 Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YOR315W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YOR316C COT1 involved in cobalt accumulation M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YOR306C MCH5 monocarboxylate permease homologue M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YOR305W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YJR015W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YJR016C ILV3 dihydroxyacid dehydratase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPR118W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPR008W HAA1 Homolog of Ace1 Activator M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPL133C RDS2 Transcriptional regulator M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YIL144W TID3 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YIL143C SSL2 DNA helicase homolog; homolog of human XPBC, ERCC3 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YFL040W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YFL039C ACT1 Actin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YML009C MRPL39 Mitochondrial ribosomal protein MRPL39 (YmL39) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YML010W SPT5 transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL130W CEG1 mRNA guanylyltransferase (mRNA capping enzyme), alpha subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL129C RSM23 mitochondrial ribosome small subunit component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YER071C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YER070W RNR1 ribonucleotide reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBL091C MAP2 methionine aminopeptidase 2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YMR255W GFD1 GREAT for FULL DEAD box protein activity M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YMR256C COX7 subunit VII of cytochrome c oxidase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGR081C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGR080W TWF1 Twinfilin A, an actin monomer sequestering protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YKR076W ECM4 (putative) involved in cell wall biogenesis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YNL230C ELA1 elongin A M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YKL019W RAM2 CAAX farnesyltransferase alpha subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YKL018C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YNR052C POP2 Putative transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YOR117W RPT5 26S protease regulatory subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YLR091W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YHR134W WSS1 weak suppressor of smt3 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YHR135C YCK1 membrane-bound casein kinase I homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL222C EDC1 Enhancer of mRNA Decapping M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YEL046C GLY1 Threonine Aldolase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL022W STT3 Putative integral ER membrane protein; subunit of the oligosaccharyltransferase complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDR065W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDR066C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YKL213C DOA1 phospholipase A2-activating protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YOR025W HST3 involved in telomeric silencing M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YFL005W SEC4 Ras-like small GTP-binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBL081W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBL080C PET112 62-kDa protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YJL163C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YNL190W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YKL064W MNR2 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YKL063C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDR119W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBR163W DEM1 Weak similarity to Pta1p (pre-tRNA processing protein) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YNR007C AUT1 Involved in autophagocytosis. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YNR006W VPS27 hydrophilic protein; has cysteine rich putative zinc finger esential for function M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBR164C ARL1 ADP-ribosylation factor-like protein 1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YEL016C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YEL017W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YFR011C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YFR010W UBP6 (putative) ubiquitin-specific protease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGR155W CYS4 Cystathionine beta-synthase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YJR072C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPL271W ATP15 nuclear gene for ATP synthase epsilon subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDR079C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDR079W PET100 cytochrome c oxidase-specific assembly factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL243W TAD1 tRNA-specific adenosine deaminase 1 (TAD1); Tad1p/scADAT1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YGL242C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPR086W SUA7 transcription factor TFIIB homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YPR088C SRP54 Signal recognition particle subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBR184W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBR185C MBA1 involved in assembly of mitochondrial respiratory complexes M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YJR126C VPS70 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YEL032W MCM3 component of DNA replication initiator complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YDL031W DBP10 similar to RNA helicases M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 34 YBR265W TSC10 3-ketosphinganine reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDR408C ADE8 glycinamide ribotide transformylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL065W AQR1 multidrug resistance transporter M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL064C YDJ1 yeast dnaJ homolog (nuclear envelope protein); heat shock protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPR165W RHO1 GTP-binding protein of the rho subfamily of ras-like proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPR166C MRP2 14 kDa mitochondrial ribosomal protein; homologous to E. coli S14 protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDL076C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDR507C GIN4 putative serine/threonine kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YOR171C LCB4 sphingoid long chain base (LCB) kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YOR168W GLN4 glutaminyl-tRNA synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YML080W DUS1 tRNA dihydrouridine synthase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YCR063W BUD31 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGR057C LST7 involved in transport of nitrogen-regulated permeases M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGR056W RSC1 Member of RSC complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YER155C BEM2 Rho-type GTPase activating protein (GAP) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YER154W OXA1 involved in cytochrome c oxidase and ATP synthase assembly M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YER169W RPH1 Repressor of PHR1 transcription; binds to PHR1 URS M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YIL067C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR287C MSU1 component of 3'-5'exonuclease complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR286W MRPL33 Mitochondrial ribosomal protein MRPL33 (YmL33) (E. coli L30) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDR304C CPR5 Cyclophilin D, Peptidyl-prolyl cis-trans isomerase D M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR309C NIP1 ~100 kDa cytoplasmic protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YJR094C IME1 transcription factor involved in meiosis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YOR054C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YLR033W RSC58 Chromatin Remodeling Complex subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YLR034C SMF3 Putative metal transporter, Nramp homolog, homolog of SMF1 and SMF2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YJL129C TRK1 180 kDa high affinity potassium transporter M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL304W YPT11 similar to Ypt1 and other Ras-like GTP-binding proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL302C RPS19B Ribosomal protein S19B (rp55B) (S16aB) (YS16B) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR268C PRP24 U4/U6 snRNP protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR267W PPA2 mitochondrial inorganic pyrophosphatase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDL005C MED2 Stoichiometric member of mediator complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDL006W PTC1 serine-threonine protein phosphatase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGR239C PEX21 Peroxin Pex21p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YHL009C YAP3 bZip DNA binding proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YJR059W PTK2 putative serine)/threonine kinase involved in spermine metabolism M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YFR003C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YFR002W NIC96 96 kDa nucleoporin-interacting component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YJL013C MAD3 spindle checkpoint complex subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YJL014W CCT3 Cytoplasmic chaperonin subunit gamma M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR188C NTC20 splicing factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR187W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL306W MRPS18 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL305C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YKL109W HAP4 transcriptional activator protein of CYC1 (component of HAP2/HAP3 heteromer) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPR005C HAL1 polar 32k Da cytoplasmic protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YLR092W SUL2 high affinity sulfate permease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YLR093C NYV1 vacuolar v-SNARE M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL112W DBP2 ATP-dependent RNA helicase of DEAD box family M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL111C CYB5 cytochrome b5 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPR147C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPR145W ASN1 asparagine synthetase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YML088W UFO1 F-box protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YML087C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YIL112W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YHR166C CDC23 Cell division cycle protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR025C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR024W SCO2 SCO1 protein homolog (S. cerevisiae) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR159W microsomal beta-keto-reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YIL038C NOT3 CCR4 trascriptional complex component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YIL039W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDR245W MNN10 galactosyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPL201C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGL159W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YAL005C SSA1 Heat shock protein of HSP70 family, cytoplasmic M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPL042C SSN3 a cyclin(SSN8)-dependent serine/threonine protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPL043W NOP4 RNA recognition motif-containing protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR119W MUD1 U1 snRNP A protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YBR120C CBP6 Translational activator of COB mRNA M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDR137W RGP1 involved in mitotic growth M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPL135W ISU1 Iron-sulfur cluster nifU-like protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPL134C ODC1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YER092W IES5 Ino Eighty Subunit 5 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YER093C Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR225C MRPL44 Mitochondrial ribosomal protein MRPL44 (YmL44) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YOL138C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YPR156C TPO3 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YIL085C KTR7 (putative) mannosyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR116C ASC1 G-beta like protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YMR115W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL180C RHO5 Rho family GTPase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL181W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGR102C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGR101W PCP1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YGL209W MIG2 Protein containing zinc fingers very similar to zinc fingers in Mig1p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDR002W YRB1 nuclear GTPase-activating protein for Ran M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDL049C KNH1 KRE9 homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YDL051W LHP1 RNA binding protein similar to human La autoantigen M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL193W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YCR079W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YLR453C RIF2 Nuclear protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 33 YNL098C RAS2 Small, GTP-binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGL238W CSE1 (putative) kinetochore protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGL237C HAP2 transcriptional activator protein of CYC1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YOR340C RPA43 DNA-dependent RNA polymerase I subunit A43 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL241C ZWF1 Glucose-6-phosphate dehydrogenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL242W APG2 Required for sporulation. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL263C YIF1 Similar to NADH dehydrogenases M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YLR313C SPH1 homologous to Spa2p, localizes to sites of polarized growth M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YLR312W-A MRPL15 Mitochondrial ribosomal protein MRPL15 (YmL15) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR260W TNA1 Tna1p is a high affinity nicotinic acid plasma membrane permease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR261C APL6 putative beta adaptin component of the membrane-associate clathrin assembly complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDR143C SAN1 (putative) transcriptional regulator M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJR010C-A SPC1 signal peptidase subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJR010W MET3 ATP sulfurylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YIL078W THS1 Threonyl-tRNA synthetase, cytoplasmic M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YIL077C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YMR008C PLB1 Phospholipase B (lypophospholipase) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDR376W ARH1 adrenodoxin oxidoreductase homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR256W GND2 6-phosphogluconate dehydrogenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGL223C COD3 Interacts with Sec35 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR257C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YLR287C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YPL222W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNR036C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR169C PUS6 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YER049W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YER050C RSM18 mitochondrial ribosome small subunit component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YMR199W CLN1 G(sub)1 cyclin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YPL113C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YKL140W TGL1 triglyceride lipase-cholesterol esterase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YHR208W BAT1 branched-chain amino acid transaminase, highly similar to mammalian ECA39, which is regulated by the oncogene myc M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YKL045W PRI2 p58 polypeptide of DNA primase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YHR026W PPA1 vacuolar ATPase V0 domain subunit c'' M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YHR027C RPN1 Subunit of 26S Proteasome (PA700 subunit) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJR143C PMT4 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJR142W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJL133W MRS3 mitochondrial carrier protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBR173C UMP1 20S proteasome maturation factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR165W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YLR035C MLH2 MutL Homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YCL024W KCC4 protein kinase related to S. pombe Nim1p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL006W LST8 Protein required for transport of permeases from the Golgi to the plasma membrane M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL005C MRP7 Mitochondrial ribosomal protein MRP7 (YmL2) (E. coli L27) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YCR060W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDL203C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDL204W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL294C RIM21 Regulator of IME2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL295W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL037C IDH1 alpha-4-beta-4 subunit of mitochondrial isocitrate dehydrogenase 1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YNL038W GPI15 human Pig-H homolog; required for N-acetylglucosaminyphosphatidylinositol synthesis.l M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YGR178C PBP1 interacts with poly(A)-binding protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YML069W POB3 binds DNA polymerase delta M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YIL034C CAP2 beta subunit of capping protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJR063W RPA12 A12.2 subunit of RNA polymerase I M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YMR211W DML1 YMR211W M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YMR212C EFR3 PHO _E_ighty _F_ive _R_equiring M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDR356W SPC110 component of the spindle pole body that interacts with Spc42p, calmodulin, and a 35 kDa protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDR357C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YOR138C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBL093C ROX3 RNA polymerase II holoenzyme/mediator subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBL095W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YLR307W CDA1 Chitin Deacetylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YAL040C CLN3 G(sub)1 cyclin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YOR298W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YAL041W CDC24 Guanine nucleotide exchange factor (a.k.a. GDP-release factor) for cdc42 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YOR298C-A MBF1 multiprotein bridging factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDL053C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YAL015C NTG1 DNA glycosylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YAL016W TPD3 protein phosphatase 2A regulatory subunit A M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDR538W PAD1 Phenylacrylic acid decarboxylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YER156C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBR132C AGP2 Amino acid permease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBR131W CCZ1 involved in sporulation, caffeine, calcium, and zinc sensitivity M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YOR188W MSB1 involved in polarized growth M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBR255C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YBR255W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJL071W ARG2 Acetylglutamate Synthase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YJL070C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 32 YMR002W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YAL038W CDC19 Pyruvate kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YOR220W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YOR221C MCT1 malonyl-CoA:ACP transferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDL227C HO Homothallic switching endonuclease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDL229W SSB1 cytoplasmic member of the HSP70 family M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR118W TEF2 translational elongation factor EF-1 alpha M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPL181W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR206W EBS1 similar to Est1, which is a putative component of telomerase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR207C UME6 Ume6p is a C6 zinc finger URS1-binding protein. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR298W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR299C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YIR023W DAL81 Transcriptional activator for allantoin and GABA catabolic genes, contains a Zn[2]-Cys[6] fungal-type binuclear cluster domain in the N-terminal region M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YIR024C GIF1 (putative) involved in cell cycle control M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGL037C PNC1 pyrazinamidase and nicotinamidase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL151C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR213W MET8 Effector in the expression of PAPS reductase and sulfite reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR049C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR048W RPS0B Ribosomal protein S0B M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER083C Protein involved in cell wall function M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR251W MRPS5 Probable mitochondrial ribosomal protein S5 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL164C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL165W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YOR216C RUD3 involved in secretion M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNR011C PRP2 RNA splicing factor RNA-dependent NTPase with DEAD-box motif M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNR010W CSE2 Component of RNA polymerase II mediator subcomplex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR107C CDC12 Component of 10 nm filaments of mother-bud neck (septin) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR106W TRR2 mitochondrial thioredoxin reductase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPR169W Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR015C MNN2 putative Golgi alpha-1,2-mannosyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR107W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR240C SNU56 U1 snRNP protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLL004W ORC3 Third subunit of the origin recognition complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL278W CAF120 CCR4 Associated Factor 120 kDa M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGR254W ENO1 enolase I M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBL032W HEK2 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGR255C COQ6 COQ6 monooxygenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YJR005W APL1 beta-adaptin, large subunit of the clathrin-associated protein complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGR245C SDA1 Severe Depolymerization of Actin M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL086W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YOL036W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YJL069C UTP18 Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YJR031C GEA1 GDP/GTP exchange factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPL089C RLM1 serum response factor-like protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPL011C TAF3 component of TAF(II) complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPL012W RRP12 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR418C CDC73 RNA polymerase II accessory protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR417W VPS36 involved in vacuolar protein targeting M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL058W TOA2 Transcription factor IIA, small chain M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL057C NUP120 100-kDa protein (predicted molecular weight is 120 kDa) with two leucine zipper motifs, coiled-coil region, and some homology to Nup133p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGR175C ERG1 Squalene monooxygenase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR398W UTP5 Protein required for cell viability M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL287W SEC21 non-clathrin coat protein involved in transport between ER and Golgi M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR175C RSM24 mitochondrial ribosome small subunit component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR174W HMO1 35 kDa protein belonging to the high mobility group (HMG) fanily of proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR064C SSZ1 Hsp70 Protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR284C DPP1 Diacylglycerol Pyrophosphate Phosphatase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGL136C MRM2 2'O-ribose methyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGL137W SEC27 encodes beta'-subunit of yeast coatomer M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR205W SCH9 cAMP-dependent protein kinase homolog, suppressor of cdc25ts M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR146W MRPS9 Probable mitochondrial ribosomal protein S9 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR133C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR132W-A Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL163W PIR3 Protein containing tandem internal repeats M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL162C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL237W YTP1 Similar to mitochondrial electron transport proteins. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR038W CHS2 chitin synthase 2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER129W PAK1 DNA polymerase alpha suppressing protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER130C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER126C NSA2 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER125W RSP5 Rsp5p encodes a hect (homologous to E6-AP C terminus) and encodes a ubiquitin-protein ligase (E3 enzyme) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGL157W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YAL032C PRP45 pre-mRNA splicing factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YAL033W POP5 An integral subunit of RNase P and apparent subunit of RNase MRP M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YHR011W DIA4 involved in invasive and pseudohyphal growth M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR214W SCJ1 dnaJ homolog M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR327C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR326W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR212W TCP1 chaperonin subunit alpha M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YJR121W ATP2 F(1)F(0)-ATPase complex beta subunit, mitochondrial M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGL099W LSG1 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPR181C SEC23 cytoplasmic GTPase-activating protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPR180W AOS1 Similar to ubiquitin activating proteins M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPL054W LEE1 Product of gene unknown M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPL053C KTR6 mannosylphosphate transferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR250W SSP120 secretory protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YJL054W TIM54 Translocase for the insertion of proteins into the mitochondrial inner membrane. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBL008W HIR1 putative repressor protein homologous to yeast Tup1p and mammalian retinal transducin; contains nuclear targeting signal M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBL007C SLA1 contains 3 SH3 domains, interacts with Bee1p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKL166C TPK3 cAMP-dependent protein kinase catalytic subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR054W YRO2 Homolog to HSP30 heat shock protein YRO1 (S. cerevisiae) 7 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR055C PRP6 RNA splicing factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL271C BNI1 contains formin homology domains; homologous to BNR1 (BNI1 related protein) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YML027W YOX1 Homeobox-domain containing protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YML026C RPS18B Ribosomal protein S18B M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YPR139C VPS66 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDL027C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER005W YND1 apyrase (NDPase/NTPase) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR203W TOM40 Mitochondrial outer membrane protein; forms the outer membrane import channel M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR204C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YDR323C PEP7 cytosolic and peripheral membrane protein with three zinc fingers; cysteine rich regions of amino acids are essential for function M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR224W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YLR225C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBL010C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBL011W SCT1 suppressor of choline-transport mutants M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER014W HEM14 protoporphyrinogen oxidase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YER176W ECM32 DNA Helicase I M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL192W CHS1 chitin synthase 1 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YFL049W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YFL048C EMP47 47 kDa type I transmembrane protein localized to the Golgi M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YGR193C PDX1 Protein X component of mitochondrial pyruvate dehydrogenase complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKR035W-A DID2 Rad52p inhibitor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YKR036C CAF4 component of CCR4 transcriptional complex M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR217W APG12 involved in autophagy M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YBR218C PYC2 pyruvate carboxylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL075W IMP4 Interacts With Mpp10. Imp4p is a specific component of the U3 snoRNP and is required for pre-18S rRNA processing. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YNL074C MLF3 Serine-rich protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YEL021W URA3 orotidine-5'-phosphate decarboxylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR206W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 31 YMR207C HFA1 Similar to acetyl-coenzyme A carboxylase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR341W RPA190 RNA polymerase I subunit 190 (alpha) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR342C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGR263C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YHR101C BIG1 involved in cell growth and size M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR033C EXO1 exonuclease M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YHR031C RRM3 DNA helicase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YPR104C FHL1 Protein with a domain similar to the fork head DNA-binding domain found in the developmental fork head protein of Drosophila melanogaster and in the HNF-3 family of hepatocyte mammalian transcription factors. M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YPR103W PRE2 proteasome subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR258W HNT3 Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR259C RPT4 ATPase; component of the 26S proteasome cap subunit M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR051C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YLR251W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YDR032C PST2 Protoplasts-SecreTed protein; the gene product was detected among the proteins secreted by regenerating protoplasts M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YDR031W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR012W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YPL071C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YPL072W UBP16 putative deubiquitinating enzyme M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YJL177W RPL17B Ribosomal protein L17B (L20B) (YL17) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YJL176C SWI3 transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YKL039W PTM1 Putative membrane protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YML082W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YML081C-A ATP18 protein associated to the ATP synthase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YHL015W RPS20 Ribosomal protein S20 M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YHL014C YLF2 GTP-binding protein and glycogen phosphorylase (weak) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR332W VMA4 vacuolar ATPase V1 domain subunit E (27 kDa) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YIL040W Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR063W RPL3 Ribosomal protein L3 (rp1) (YL1) M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOR064C YNG1 histone acetyltransferase complex component M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOL038W PRE6 alpha-type of subunit of 20S proteasome M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGR013W SNU71 U1 snRNP protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YLR262C-A Similar to C. elegans protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YDL161W ENT1 Ent1p M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YDL160C DHH1 (putative) DEAD box RNA helicase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YMR198W CIK1 spindle pole body associated protein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YNL121C TOM70 70 kDa mitochondrial specialized import receptor of the outer membrane M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YER111C SWI4 transcription factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YAL023C PMT2 dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YDL097C RPN6 Subunit of the regulatory particle of the proteasome M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGR033C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGR032W GSC2 catalytic component of 1,3-beta-D-glucan synthase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YMR228W MTF1 Mitochondrial RNA polymerase specificity factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YMR229C RRP5 Protein required for processing of pre-rRNA M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGL143C MRF1 Mitochondrial polypeptide chain release factor M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YMR129W POM152 Nuclear pore membrane glycoprotein M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YPL268W PLC1 phosphoinositide-specific phospholipase C M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YIL105C Hypothetical ORF M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YIL106W MOB1 (putative) transcriptional regulator involved in mitosis M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YGR177C ATF2 Alcohol acetyltransferase M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YKL053C-A Similar to human sequence predicted by GENSCAN M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOL112W MSB4 multicopy suppressor of bud emergence defect M[59] tRTAMATAKWT. Novel: ste12 (hits tRNA) down 1 30 YOL111C Hypothetical ORF M[59] M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 110 YGR059W SPR3 septin protein involved in sporulation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 96 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 88 YOR266W PNT1 involved in pentamidine resistance protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 88 YOR267C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 86 YNL002C RLP7 Protein with similarity to ribosomal proteins including Rpl6p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 86 YMR043W MCM1 transcription factor containing the 56 amino-acid MADS (MCM1, AG, DEFAm SRF)-box motif within its DNA binding domain, plays a central role in the formation of both repressor and activator complexes M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 81 YNL191W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 81 YKL085W MDH1 mitochondrial malate dehydrogenase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 81 YAL005C SSA1 Heat shock protein of HSP70 family, cytoplasmic M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 75 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 71 YLR199C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 71 YLR197W SIK1 homology to microtubule binding proteins and to X90565_5.cds M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 2 69 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 61 YPR114W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 59 YHR088W RPF1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 59 YHR089C GAR1 small nucleolar RNP proteins M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 57 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 56 YLR035C MLH2 MutL Homolog M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 54 YKL014C Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 54 YKL015W PUT3 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 53 YHR036W Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 52 YHR120W MSH1 mutS homolog involved in mitochondrial DNA repair M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YDR322W MRPL35 Mitochondrial ribosomal protein MRPL35 (YmL35) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YDR322C-A TIM11 subunit e of mitochondrial F1F0-ATPase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YMR187C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YMR186W HSC82 constitutively expressed heat shock protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YKL035W UGP1 Uridinephosphoglucose pyrophosphorylase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YDR463W STP1 Nuclear-localized protein containing zinc finger motifs M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YEL025C SRI1 SWI/SNF and RSC interacting protein 1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YEL026W SNU13 U4/U6.U5 snRNP component M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 51 YER128W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 50 YPR125W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 50 YOR101W RAS1 ras proto-oncogene homolog M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 50 YOR103C OST2 16-kDa, epsilon subunit of oligosaccharyltransferase complex; 40% identical to vertebrate DAD1 protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 50 YDR159W SAC3 Leucine permease transcriptional regulator M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 50 YDL208W NHP2 HMG-like nuclear protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 49 YJL141C YAK1 Serine-threonine protein kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 49 YJL143W TIM17 16.5 kDa inner membrane protein required for import of mitochondrial precursor proteins M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 49 YDR073W SNF11 component of SWI/SNF global transcription activator complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 49 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 49 YCR084C TUP1 glucose repression regulatory protein, exhibits similarity to beta subunits of G proteins M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 49 YCR083W TRX3 mitochondrial thioredoxin M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YKL020C SPT23 suppressor protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YOL136C PFK27 6-phosphofructo-2-kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YOL137W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YCR028C-A RIM1 Single-stranded zinc finger DNA-binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YML125C Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YOR233W KIN4 protein kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YOR234C RPL33B Ribosomal protein L33B (L37B) (rp47) (YL37) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YDR375C BCS1 Mitochondrial ATPase (AAA family) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YKL042W SPC42 component of the spindle pole body M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YNL244C SUI1 translation initiation factor 3 (eIF3) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YGL049C TIF4632 TIF4632 encodes one of two homologs of eIF-4G, the 150 kD subunit of the mRNA cap-binding complex (eIF-4F) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 48 YGL050W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YHR083W Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YPL085W SEC16 vesicle coat component M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YGL058W RAD6 Ubiquitin conjugating (E2) enzyme. The C-terminal 23 residues are critical for sporulation and histone polyubiquitinating activity, but not UV repair or induced mutagenesis. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YGL057C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YGL008C PMA1 plasma membrane H+-ATPase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YJL122W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 47 YJL121C RPE1 D-ribulose-5-Phosphate 3-epimerase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YHR076W M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YHR077C NMD2 Highly acidic C-terminus M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YLR323C CWC24 Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YML059C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YML060W OGG1 43-kDa 8-oxo-guanine DNA glycosylase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YJL138C TIF2 translation initiation factor eIF4A M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YIL070C MAM33 Mitochondrial protein involved in respiration M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 46 YDR420W HKR1 Type 1 membrane protein with EF hand motif M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YOR229W WTM2 Transcriptional modulator M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YNR052C POP2 Putative transcription factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YCL029C BIK1 Microtubule-binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YNL124W NAF1 Nuclear assembly factor (putative) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YJR072C Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YKL062W MSN4 zinc finger protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YOR037W CYC2 cytochrome c mitochondrial import factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 45 YOR038C HIR2 putative repressor protein; contains nuclear targeting signal M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YGL126W SCS3 involved in inositol biosynthesis M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YPR018W RLF2 p90 subunit of yeast Chromatin Assembly Factor-I (CAF-I) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YMR316W DIA1 may be involved in invasive growth, pseudohyphal growth M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YHR084W STE12 Transcription factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YDR046C BAP3 Valine transporter M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YER103W SSA4 member of 70 kDa heat shock protein family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 44 YFR018C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YDR074W TPS2 Trehalose-6-phosphate phosphatase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YMR042W ARG80 transcription factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YNL056W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YNL055C POR1 Outer mitochondrial membrane porin (voltage-dependent anion channel, or VDAC) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YLR248W RCK2 Serine/threonine protein kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YBR073W RDH54 Putative helicase similar to RAD54 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YJL191W RPS14B Ribosomal protein S14B (rp59B) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YJL190C RPS22A Ribosomal protein S22A (S24A) (rp50) (YS22) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YBR280C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YBR279W PAF1 RNA polymerase II-associated protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 43 YMR258C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YBR171W SEC66 glycoprotein complexed with Sec62p and Sec63p in the Sec63 complex, an integral endoplasmic reticulum membrane protein complex required for translocation of presecretory proteins M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YBR172C SMY2 Kinesin-related protein suppressing myosin defects (MYO2) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YDR482C CWC21 YDR482C M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YAL021C CCR4 95 kDa containng leucine rich tandem repeats M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YPL050C MNN9 Protein required for complex glycosylation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YPL051W ARL3 Similar to ADP-ribosylation factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YLR225C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YLR224W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YIL042C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YKL059C MPE1 Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YPR169W Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YMR098C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YGL117W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YNL093W YPT53 GTP-binding protein of the rab family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YNR051C BRE5 protein of unknown function M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YER043C SAH1 putative S-adenosyl-L-homocysteine hydrolase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 42 YER042W MXR1 peptide methionine sulfoxide reductase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YLR233C EST1 involved in telomere length regulation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YLR403W SFP1 split zinc finger protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YOL058W ARG1 arginosuccinate synthetase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YPL082C MOT1 putative helicase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YMR129W POM152 Nuclear pore membrane glycoprotein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YER102W RPS8B Ribosomal protein S8B (S14B) (rp19) (YS9) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YKL016C ATP7 ATP synthase d subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YOR356W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YOR357C GRD19 Grd19p contains the PX domain found in human SNX1 (Sorting Nexin-1). Localized predominantly to the cytosol, however, a minor amount associates with membranes. In vps27 mutant cells, Grd19p-HA localizes in the prevaculoar compartment. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YMR311C GLC8 Regulates activity of protein phosphatase 1, Glc7p, which is involved in proper chromosome segregation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YHR127W (H)igh copy (S)uppressor of (N)34 dominant negative allele of SEC4. Suppression is very specific to this allele. It has no affect on the analogous YPT1 allele. No homology or known function. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YJR101W RSM26 mitochondrial ribosome small subunit component M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YJR102C VPS25 vacuolar protein sorting (putative) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YNL268W LYP1 lysine permease M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YJL031C BET4 Geranylgeranyltransferase Type II alpha subunit (PGGTase-II, alpha subunit) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YJL033W HCA4 putative RNA helicase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YPR187W RPO26 subunit common to RNA polymerases I, II, and III M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YPR188C MLC2 putative light chain for Myo1p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YCR076C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YPL208W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 41 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YBL051C PIN4 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YKL116C PRR1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YKL117W SBA1 Hsp90 (Ninety) Associated Co-chaperone M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YOR178C GAC1 Regulatory subunit for Glc7p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YMR243C ZRC1 involved in zinc and cadmium ion homeostasis M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YFR001W LOC1 Double-stranded RNA-binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YMR139W RIM11 Serine/threonine protein kinase, phosphorylates the mitotic activator IME1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YER156C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YMR277W FCP1 TFIIF interacting component of CTD phosphatase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YMR231W PEP5 peripheral vaculor membrane protein; putative Zn-finger protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YDR194C MSS116 Mitochondrial DEAD box RNA helicase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YPL236C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YPL237W SUI3 beta subunit of translation initiation factor eIF-2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YGR136W LSB1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YGR138C TPO2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YLR399C BDF1 Bdf1p contains two bromodomains, localizes to the nucleus and to chomosomes in spread meiotic nuclei but is excluded from the nucleolus M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YBR035C PDX3 pyridoxine (pyridoxiamine) phosphate oxidase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YKL086W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YBR089C-A NHP6B 11-kDa nonhistone chromosomal protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YLL031C GPI13 phosphoryltransferase that adds phosphoethanolamine to the third mannose residue of the GPI anchor precursor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YIL104C SHQ1 Essential protein involved in snoRNA accumulation. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YNL099C OCA1 Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 40 YNL100W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YMR241W YHM2 DNA-binding protein, mtDNA stabilizing protein, mitochondrial inner membrane protein with low homology to RIM2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YMR242C RPL20A Ribosomal protein L20A (L18A) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YDR361C BCP1 Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YPL156C PRM4 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YPL157W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YNL294C RIM21 Regulator of IME2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YNL295W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YBR080C SEC18 cytoplasmic protein involved in protein transport between ER and Golgi; ATPase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YBR143C SUP45 Homolog of eRF1 (eukaryotic Release Factor 1) in other metazoans. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YBR142W MAK5 Probable pre-mRNA splicing RNA-helicase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YKL023W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YKL022C CDC16 putative metal-binding nucleic acid-binding protein, interacts with Cdc23p and Cdc27p to catalyze the conjugation of ubiquitin to cyclin B M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YNL113W RPC19 subunit common to RNA polymerases I (A) and III (C) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YML121W GTR1 Putative small GTPase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YML120C NDI1 NADH dehydrogenase (ubiquinone) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YHR031C RRM3 DNA helicase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YHR094C HXT1 High-affinity hexose (glucose) transporter M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YDR511W ACN9 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YDR512C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YGR029W ERV1 involved in mitochondrial biogenesis M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YGR030C POP6 integral subunit of RNase P and apparent subunit of RNase MRP M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YOR204W DED1 ATP-dependent RNA helicase of DEAD box family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YOR205C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YKL140W TGL1 triglyceride lipase-cholesterol esterase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YHR138C Homologous to PBI2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YHR137W ARO9 aromatic amino acid aminotransferase II M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YGL071W RCS1 Putative transcription factor that binds the consensus site PyPuCACCCPu M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YGL070C RPB9 RNA polymerase II subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YLR059C REX2 RNA exonuclease M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YMR228W MTF1 Mitochondrial RNA polymerase specificity factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YMR229C RRP5 Protein required for processing of pre-rRNA M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YOL138C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YHR114W BZZ1 Myo3/5p-Bee1p-Vrp1p actin assembly complex component M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YHR115C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YJL137C GLG2 glycogen synthesis initiator M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YLR208W SEC13 cytoplasmic protein involved in release of transport vesicles from the ER M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YLR209C PNP1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YMR190C SGS1 has DNA helicase signature motifs M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YMR189W GCV2 Glycine decarboxylase complex (P-subunit), glycine synthase (P-subunit), Glycine cleavage system (P-subunit) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 39 YOR243C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YNL016W PUB1 poly(A)+ RNA-binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YGL234W ADE5,7 glycinamide ribotide synthetase and aminoimidazole ribotide synthetase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YOR187W TUF1 Translation elongation factor Tu, mitochondrial M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YLR049C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YLR048W RPS0B Ribosomal protein S0B M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YPL079W RPL21B Ribosomal protein L21B M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YPL078C ATP4 F(1)F(0)-ATPase complex delta subunit, mitochondrial M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YJL013C MAD3 spindle checkpoint complex subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YJL014W CCT3 Cytoplasmic chaperonin subunit gamma M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YDL227C HO Homothallic switching endonuclease M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YDL229W SSB1 cytoplasmic member of the HSP70 family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YOL131W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YHR002W LEU5 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YHR003C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YML027W YOX1 Homeobox-domain containing protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YML026C RPS18B Ribosomal protein S18B M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YPL048W CAM1 Calcium and phospholipid binding protein homologous to translation elongation factor 1-gamma (EF-1gamma) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YGR155W CYS4 Cystathionine beta-synthase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YAR003W SWD1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YAR007C RFA1 69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YER172C BRR2 putative ATP-dependent RNA helicase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YER171W RAD3 DNA repair helicase component of transcription factor b M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YAL042W ERV46 ER vesicle protein of 46 kDa M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 38 YMR288W HSH155 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YGR095C RRP46 Putative 3'->5' exoribonuclease; component of exosome complex of 3'->5' exonucleases M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YGR094W VAS1 mitochondrial and cytoplasmic valyl-tRNA synthetase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YLR426W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YML092C PRE8 proteasome component Y7 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YML093W UTP14 Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YPR027C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YPR026W ATH1 Acid trehalase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YDR502C SAM2 S-adenosylmethionine synthetase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YDR501W PLM2 PLasmid Maintenance M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YBR028C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YHR008C SOD2 Manganese-containing superoxide dismutase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YOL122C SMF1 has been localized to both the plasma membrane and the mitochondrial membrane M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YOL123W HRP1 putative polyadenylated-RNA-binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YHR099W TRA1 ATM/Mec1/TOR1+2-related M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YHR100C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YBL101C ECM21 involved in cell wall biogenesis M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YBL102W SFT2 similar to mammalian syntaxin 5 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YOR287C Protein required for cell viability M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YOR286W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YDL031W DBP10 similar to RNA helicases M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YMR191W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YDR091C RLI1 putative member of nontransporter group of ATP-binding cassette (ABC) superfamily M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YNL154C YCK2 membrane-bound casein kinase I homolog M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YNL155W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YDR320C-A HSK2 Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YML117W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YBR135W CKS1 subunit of the Cdc28 protein kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YGL078C DBP3 ATP-dependent RNA helicase CA3 of the DEAD/DEAH box family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YGL079W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YPR133W-A TOM5 Membrane protein involved in protein translocation to the mitochondria M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 37 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR210W RPB10 RNA polymerase II subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR211C MGM1 encodes protein with GTP-binding domain related to dynamin M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YML048W GSF2 involved in glucose repression M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YML047C PRM6 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YER031C YPT31 ras-like GTPase, highly homologous to YPT32 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YER030W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR093C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR092W ECM3 involved in cell wall biogenesis (putative) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YNL059C ARP5 Actin-related protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YNL061W NOP2 90-kDa protein, located in nucleolus, that is homologous to a human proliferation-associated nucleolar protein, p120 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YBR246W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YBR247C ENP1 Putative 57 kDa protein with an apparent MW of 70 kDa by SDS-PAGE M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YPL159C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YPL160W CDC60 cytosolic leucyl tRNA synthetase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YMR177W MMT1 (putative) mitochondrial metal transporter M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YER065C ICL1 isocitrate lyase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YJR060W CBF1 basic helix-loop-helix protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YHR097C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR310C NOP58 57 kDa nucleolar protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YDL059C RAD59 The RAD59 gene product has homology to the Rad52 protein. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YDL060W TSR1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YNL069C RPL16B Ribosomal protein L16B (L21B) (rp23) (YL15) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YNL070W TOM7 translocase of the outer mito. membrane M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YEL024W RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YEL023C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YGL122C NAB2 nuclear polyadenylated RNA binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YGL123W RPS2 Ribosomal protein S2 (S4) (rp12) (YS5) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR269W PAC1 Required for viability in the absence of Cin8p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YOR270C VPH1 vacuolar ATPase V0 domain subunit a (100 kDa) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YPL023C MET12 putative methylenetetrahydrofolate reductase (mthfr) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YPL024W NCE4 involved in cell separation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YHR206W SKN7 transcription factor involved in oxidative stress response M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YHR207C SET5 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YDR494W RSM28 Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 36 YDR495C VPS3 vacuolar protein targeting protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YKL201C MNN4 involved in mannose metabolism M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YKL053C-A Similar to human sequence predicted by GENSCAN M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YOL092W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YDR263C DIN7 involved in DNA repair M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YDR262W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YDR097C MSH6 Homolog of the human GTBP protein, forms a complex with Msh2p to repair both single-base and insertion-deletion mispairs, redundant with Msh3p in repair of insertion-deletion mispairs M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YDR096W GIS1 putative zinc finger protein; repressor of PHR1 transcription M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YMR208W ERG12 mevalonate kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YMR209C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YOL126C MDH2 cytosolic malate dehydrogenase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YOL127W RPL25 Ribosomal protein L25 (rpl6L) (YL25) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YDL203C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YDL204W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YPL045W VPS16 Vacuolar sorting protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YMR225C MRPL44 Mitochondrial ribosomal protein MRPL44 (YmL44) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YGR072W UPF3 involved in decay of mRNA containing nonsense codons M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YOR031W CRS5 Metallothionein-like protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YOR032C HMS1 myc-family transcription factor homolog M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YGR057C LST7 involved in transport of nitrogen-regulated permeases M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YGR056W RSC1 Member of RSC complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YNL037C IDH1 alpha-4-beta-4 subunit of mitochondrial isocitrate dehydrogenase 1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YNL038W GPI15 human Pig-H homolog; required for N-acetylglucosaminyphosphatidylinositol synthesis.l M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YHR006W STP2 Zinc finger (Cys(2)-His(2)) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 35 YHR007C ERG11 cytochrome P450 lanosterol 14a-demethylase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YAL038W CDC19 Pyruvate kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YCR079W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YNL238W KEX2 Ca2+-dependent serine protease M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YJL051W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YDR100W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YDR101C ARX1 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YMR105C PGM2 Phosphoglucomutase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YPR161C SGV1 CDC28/cdc2 related protein kinase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YPR160W GPH1 Glycogen phosphorylase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YBL072C RPS8A Ribosomal protein S8A (S14A) (rp19) (YS9) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YHR168W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YBR241C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YBR262C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YKL125W RRN3 DNA-independent RNA Polymerase I transcription factor M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YDR302W GPI11 GPI-phosphoethanolamine transferase Gpi7p subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YDR303C RSC3 RSC complex component M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YHR092C HXT4 High-affinity glucose transporter M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 34 YBL105C PKC1 Protein Kinase C M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YOR147W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YOR148C SPP2 spliceosome-associated protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YHL034C SBP1 Single-strand nucleic acid binding protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YDR515W SLF1 RNA binding protein with La motif M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YDR516C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YPL268W PLC1 phosphoinositide-specific phospholipase C M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YMR197C VTI1 Vti1p is a v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YMR196W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YGR169C PUS6 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YOR230W WTM1 Transcriptional modulator M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YHR183W GND1 Phosphogluconate Dehydrogenase (Decarboxylating) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YML001W YPT7 GTP-binding protein, rab family M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YMR001C CDC5 protein kinase which functions at the G(sub)2/M boundary M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YNL232W CSL4 Involved in kinetochore-related function M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YNL231C PDR16 homologous to Pdr17p and Sec14p M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YDR514C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YDR513W TTR1 Glutaredoxin (thioltransferase) (glutathione reductase) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YHR143W DSE2 Daugher Specific Expression 2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YML019W OST6 Putative new 37kDa subunit of N-oligosaccharyltransferase complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YML018C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YDL007W RPT2 (putative) 26S protease subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YLR257W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YLR390W-A CCW14 Secretory Stress Response protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YLR392C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YKL135C APL2 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 33 YKL137W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YDR225W HTA1 Histone H2A (HTA1 and HTA2 code for nearly identical proteins) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YKR034W DAL80 negative regulator of multiple nitrogen catabolic genes M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YJR137C ECM17 Putative sulfite reductase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YNL107W YAF9 Yeast homolog of the human leukemogenic protein AF9; member of a large protein complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YNL106C INP52 inositol polyphosphate 5-phosphatase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YJL149W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YOL040C RPS15 40S ribosomal protein S15 (S21) (rp52) (RIG protein) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YEL051W VMA8 vacuolar ATPase V1 domain subunit D M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YNL211C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YNL212W VID27 vacuole import and degradation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YEL050C RML2 mitochondrial ribosomal protein L2 of the large subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YLR004C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YDR466W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YDR468C TLG1 tSNARE that affects a Late Golgi compartment M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YLR373C VID22 vacuole import and degradation M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YLR372W SUR4 involved in fatty acid biosynthesis M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YBR289W SNF5 subunit of the chromatin remodeling Snf/Swi complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YGL148W ARO2 Chorismate synthase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YGL147C RPL9A Ribosomal protein L9A (L8A) (rp24) (YL11) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 32 YOR214C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YOR219C STE13 dipeptidyl aminopeptidase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YOR217W RFC1 Subunit 1 of Replication Factor C; homologous to human RFC 140 kDa subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YPL103C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YPL104W MSD1 Aspartyl-tRNA synthetase, mitochondrial M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YPL087W YDC1 alkaline dihydroceramidase with minor reverse activity. M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YPL086C ELP3 RNA polymerase II-associated Histone acetyltransferase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YLR429W CRN1 has homology to the Dictyostelium and human actin-binding protein coronin M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 31 YPR034W ARP7 actin related protein, subunit of the chromatin remodeling Snf/Swi complex M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YJR017C ESS1 Peptidyl-prolyl cis/trans isomerase (PPIase) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YGR148C RPL24B Ribosomal protein L24B (rp29) (YL21) (L30B) M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YNL312W RFA2 subunit 2 of replication factor RF-A; 29% identical to the human p34 subunit of RF-A M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YNL311C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YJR010C-A SPC1 signal peptidase subunit M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YJR010W MET3 ATP sulfurylase M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YDR298C ATP5 ATP synthase subunit 5; oligomycin sensitivity-conferring protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YDR297W SUR2 Syringomycin response protein 2 M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YAL024C LTE1 putative GTP-exchange protein M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YGR203W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YLR413W Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YLR414C Hypothetical ORF M[60] TtTATA.TATATA.A Novel: Downstream cluster 74 down 1 30 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[60] M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 80 YGR059W SPR3 septin protein involved in sporulation M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 77 YPL063W Protein required for cell viability M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 71 YJL149W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 67 YNL209W SSB2 Heat shock protein of HSP70 family, homolog of SSB1 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 65 YKL151C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 64 YGL157W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 63 YCR011C ADP1 Active transport ATPase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 62 YMR243C ZRC1 involved in zinc and cadmium ion homeostasis M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 2 62 YGR248W SOL4 similar to SOL3 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 47 YNL268W LYP1 lysine permease M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 47 YNL329C PEX6 Member of the AAA-protein family that includes NSFp and PEX1p M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 46 YGL240W DOC1 component of the anaphase-promoting complex M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 46 YGR121C MEP1 ammonia permease M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 46 YER027C GAL83 glucose repression protein, a component of the Snf1 complex M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 45 YGR079W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 45 YNL054W VAC7 Integral vacuolar membrane protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 45 YPR137W RRP9 U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing. M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 45 YPR138C MEP3 NH4+ transporter, highly similar to Mep1p and Mep2p M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 44 YBR067C TIP1 cell wall mannoprotein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 44 YPR035W GLN1 glutamine synthetase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 44 YNL007C SIS1 sit4 suppressor, dnaJ homolog M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 42 YGR049W SCM4 suppressor of cdc4 mutations M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 40 YPL230W Up in StarVation M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 40 YKL035W UGP1 Uridinephosphoglucose pyrophosphorylase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 40 YOR043W WHI2 involved in growth regulation M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 40 YKL052C ASK1 Associated with Spindles and Kinetochores M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 39 YKL121W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 38 YBR278W DPB3 C and C' subunits of DNA polymerase II M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 37 YLR248W RCK2 Serine/threonine protein kinase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 37 YER109C FLO8 putative transcriptional activator of FLO1 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 37 YGL223C COD3 Interacts with Sec35 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 36 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 36 YDR388W RVS167 (putative) cytoskeletal protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 36 YPR078C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 36 YKR062W TFA2 Small subunit of TFIIE transcription factor M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 36 YKR063C LAS1 May regulate expression of genes involved in bud formation and morphogenesis M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YLL018C-A COX19 Cox19p (under characterization) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YBR028C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YDL234C GYP7 GTPase-activating protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YHL031C GOS1 Golgi SNARE protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YBR071W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YLR356W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YLR357W RSC2 Member of RSC complex. M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 34 YJL137C GLG2 glycogen synthesis initiator M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YLL027W ISA1 Iron Sulfur Assembly -- IscA/NifA homolog M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YBR112C CYC8 Transcription regulatory protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YOL082W CVT19 CVT20 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YLR411W CTR3 Copper Transporter M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YCR018C SRD1 Transcription regulator M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YIR003W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YER024W YAT2 carnitine acetyltransferase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR310C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YHR096C HXT5 hexose transporter M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YOR149C SMP3 involved in plasmid maintenance M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR084W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YER067W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YKL191W DPH2 diphthamide synthesis protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YHR049W FSH1 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YDR352W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YHR094C HXT1 High-affinity hexose (glucose) transporter M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YDL193W Protein required for cell viability M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YNL289W PCL1 G(sub)1 cyclin that associates with PHO85 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR257C PET111 translational activator of cytochrome c oxidase subunit II M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR086W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YJL042W MHP1 Putative microtubule-associated protein (MAP) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YJL010C Protein required for cell viability M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YLR024C UBR2 ubiquitin-protein ligase (E3) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR002W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YBR197C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YDR329C PEX3 48-kDa peroxisomal integral membrane protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YMR263W SAP30 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YDR444W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YDL039C PRM7 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 33 YPL184C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOL097C WRS1 cytoplasmic tryptophanyl-tRNA synthetase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YGR258C RAD2 homolog of xeroderma pigmentosum group G (XPG) protein, copufurifies with transcription factor, TFIIH, mRNA is cell cycle regulated and induced by DNA damage and by meiosis (different cis-sites utilized in damage and meiotic induction M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YDL085W NDE2 Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YGL146C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YNL166C BNI5 bud neck protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOR271C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YBR285W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YBL050W SEC17 peripheral membrane protein required for vesicular transport between ER and Golgi M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YEL063C CAN1 arginine permease M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YER166W DNF1 Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YKL190W CNB1 Type 2B protein phosphatase; regulatory B subunit of calcineurin M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOR033C EXO1 exonuclease M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YER110C KAP123 Karyopherin beta 4 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOR377W ATF1 Alcohol acetyltransferase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YHR085W Protein required for cell viability M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YNL070W TOM7 translocase of the outer mito. membrane M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YNL069C RPL16B Ribosomal protein L16B (L21B) (rp23) (YL15) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YMR183C SSO2 post-Golgi t-SNARE M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YMR246W FAA4 long-chain fatty acid--CoA ligase and synthetase 4 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YMR247C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YJL034W KAR2 Homologue of mammalian BiP (GPR78) protein; member of the HSP70 gene family M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YLR429W CRN1 has homology to the Dictyostelium and human actin-binding protein coronin M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YNL023C FAP1 Transcription factor homolog; similarity to Drosophila melanogaster shuttle craft protein; similarity to human NFX1 protein; similarity to human DNA-binding protein tenascin M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YGR284C ERV29 ER-Golgi transport vesicle protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YKL059C MPE1 Protein required for cell viability M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YJL047C RTT101 Regulator of Ty1 Transposition M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YPR008W HAA1 Homolog of Ace1 Activator M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YMR198W CIK1 spindle pole body associated protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOR152C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YER008C SEC3 SEC3 encodes the 144 kD and 91 kD components of the Exocyst complex; the 91 kD component is a C-terminal proteolytic breakdown product of full length Sec3p M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YJL062W-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOR342C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOR341W RPA190 RNA polymerase I subunit 190 (alpha) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOL130W ALR1 putative ion transporter M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YOL131W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 32 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YNL168C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YKR053C YSR3 DHS-1-P phosphatase M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YIL061C SNP1 U1snRNP 70K protein homolog M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YJR044C VPS55 YJR044c M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YJR129C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YML053C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YLR442C SIR3 regulator of silencing at HML, HMR, and telomeres M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YGR156W PTI1 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YHR205W SCH9 cAMP-dependent protein kinase homolog, suppressor of cdc25ts M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YHR136C SPL2 17 kDa protein M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YBR050C REG2 putative Glc7 regulatory subunit M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YGR193C PDX1 Protein X component of mitochondrial pyruvate dehydrogenase complex M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YJL138C TIF2 translation initiation factor eIF4A M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YJL099W CHS6 involved in chitin biosynthesis M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 31 YHL032C GUT1 glyerol kinase (converts glycerol to glycerol-3-phosphate M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YOL138C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YNL024C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YML125C Protein required for cell viability M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YLR004C Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YKR006C MRPL13 mitochondrial ribosomal protein YmL13 M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YDR295C PLO2 Ploidy-related M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YDR317W Hypothetical ORF M[61] GKBAGGGT Known: TBF1 and Novel: Glycolysis down 1 30 YKL187C Hypothetical ORF M[61] M[62] GC..TTA.CGG Known: Hap1 down 2 93 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[62] GC..TTA.CGG Known: Hap1 down 2 91 YJL089W SIP4 shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region; lexA-Sip4p activates transcription M[62] GC..TTA.CGG Known: Hap1 down 2 79 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[62] GC..TTA.CGG Known: Hap1 down 2 76 YGR059W SPR3 septin protein involved in sporulation M[62] GC..TTA.CGG Known: Hap1 down 2 73 YOL059W GPD2 Glycerol-3-phosphate dehydrogenase (NAD+) M[62] GC..TTA.CGG Known: Hap1 down 2 71 YDR310C SUM1 nuclear protein involved in silencing M[62] GC..TTA.CGG Known: Hap1 down 2 71 YPR015C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 2 67 YHR008C SOD2 Manganese-containing superoxide dismutase M[62] GC..TTA.CGG Known: Hap1 down 1 54 YFL044C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 54 YLR045C STU2 spindle pole body component M[62] GC..TTA.CGG Known: Hap1 down 1 53 YPL176C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 52 YOR033C EXO1 exonuclease M[62] GC..TTA.CGG Known: Hap1 down 1 44 YOR107W RGS2 GTPase activating protein for Gpa2 M[62] GC..TTA.CGG Known: Hap1 down 1 43 YBL086C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 42 YHR064C SSZ1 Hsp70 Protein M[62] GC..TTA.CGG Known: Hap1 down 1 41 YNL054W VAC7 Integral vacuolar membrane protein M[62] GC..TTA.CGG Known: Hap1 down 1 41 YBR222C FAT2 Probable AMP-binding protein M[62] GC..TTA.CGG Known: Hap1 down 1 41 YKR061W KTR2 putative mannosyltransferase; type 2 membrane protein M[62] GC..TTA.CGG Known: Hap1 down 1 41 YIL123W SIM1 (putative) invovled in control of DNA replication M[62] GC..TTA.CGG Known: Hap1 down 1 41 YLL028W TPO1 polyamine transport protein M[62] GC..TTA.CGG Known: Hap1 down 1 41 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[62] GC..TTA.CGG Known: Hap1 down 1 40 YJL163C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 40 YDL109C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 40 YHR189W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 40 YGL073W HSF1 heat shock transcription factor M[62] GC..TTA.CGG Known: Hap1 down 1 40 YHR025W THR1 homoserine kinase M[62] GC..TTA.CGG Known: Hap1 down 1 40 YPR110C RPC40 RNA polymerase III (C) subunit M[62] GC..TTA.CGG Known: Hap1 down 1 40 YPR109W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 40 YGL103W RPL28 Ribosomal protein L28 (L29) (rp44) (YL24) M[62] GC..TTA.CGG Known: Hap1 down 1 40 YCR060W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 40 YOR179C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 40 YOR043W WHI2 involved in growth regulation M[62] GC..TTA.CGG Known: Hap1 down 1 39 YEL020C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 39 YEL020W-A TIM9 mitochondrial inner membrane translocase M[62] GC..TTA.CGG Known: Hap1 down 1 39 YPR152C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 39 YKL163W PIR3 Protein containing tandem internal repeats M[62] GC..TTA.CGG Known: Hap1 down 1 39 YKL162C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 39 YPR137W RRP9 U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing. M[62] GC..TTA.CGG Known: Hap1 down 1 39 YPR138C MEP3 NH4+ transporter, highly similar to Mep1p and Mep2p M[62] GC..TTA.CGG Known: Hap1 down 1 39 YGR248W SOL4 similar to SOL3 M[62] GC..TTA.CGG Known: Hap1 down 1 39 YGR121C MEP1 ammonia permease M[62] GC..TTA.CGG Known: Hap1 down 1 39 YPR008W HAA1 Homolog of Ace1 Activator M[62] GC..TTA.CGG Known: Hap1 down 1 39 YNL191W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 39 YPL262W FUM1 mitochondrial and cytoplasmic fumarase (fumarate hydralase) M[62] GC..TTA.CGG Known: Hap1 down 1 39 YER140W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 38 YCR073C SSK22 protein kinase M[62] GC..TTA.CGG Known: Hap1 down 1 38 YKL069W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 38 YPL186C UIP4 YPL186C M[62] GC..TTA.CGG Known: Hap1 down 1 38 YPL187W MF(ALPHA)1 mating factor alpha M[62] GC..TTA.CGG Known: Hap1 down 1 38 YGR156W PTI1 M[62] GC..TTA.CGG Known: Hap1 down 1 38 YHR102W KIC1 PAK/Ste20 kinase family M[62] GC..TTA.CGG Known: Hap1 down 1 38 YBR067C TIP1 cell wall mannoprotein M[62] GC..TTA.CGG Known: Hap1 down 1 37 YNL101W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 37 YML075C HMG1 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme M[62] GC..TTA.CGG Known: Hap1 down 1 37 YBR107C IML3 weakly similar to chitin synthases, involved in chromosomal segregation and mitosis M[62] GC..TTA.CGG Known: Hap1 down 1 37 YBR106W PHO88 regulator of Pho81, involved in regulating phosphate transport M[62] GC..TTA.CGG Known: Hap1 down 1 37 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[62] GC..TTA.CGG Known: Hap1 down 1 37 YHR067W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 37 YER068W MOT2 putative zinc finger protein M[62] GC..TTA.CGG Known: Hap1 down 1 37 YPL140C MKK2 protein kinase M[62] GC..TTA.CGG Known: Hap1 down 1 37 YNL209W SSB2 Heat shock protein of HSP70 family, homolog of SSB1 M[62] GC..TTA.CGG Known: Hap1 down 1 37 YLR251W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 37 YPL223C GRE1 hydrophilic polypeptide with no known homology M[62] GC..TTA.CGG Known: Hap1 down 1 37 YER156C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 37 YJL151C SNA3 Small integral membrane protein M[62] GC..TTA.CGG Known: Hap1 down 1 36 YMR016C SOK2 displays homologies to several transcription factors M[62] GC..TTA.CGG Known: Hap1 down 1 36 YPL231W FAS2 alpha subunit of fatty acid synthase M[62] GC..TTA.CGG Known: Hap1 down 1 36 YLR051C Protein required for cell viability M[62] GC..TTA.CGG Known: Hap1 down 1 36 YKL045W PRI2 p58 polypeptide of DNA primase M[62] GC..TTA.CGG Known: Hap1 down 1 36 YJL128C PBS2 MAP kinase kinase (MEK), may act as a scaffolding protein for Sho1p, Ste11p, and Hog1p M[62] GC..TTA.CGG Known: Hap1 down 1 35 YHR120W MSH1 mutS homolog involved in mitochondrial DNA repair M[62] GC..TTA.CGG Known: Hap1 down 1 35 YER088C DOT6 nuclear protein with Myb domain involved in telomeric silencing M[62] GC..TTA.CGG Known: Hap1 down 1 35 YJR034W PET191 involved in cytochrome c oxidase assembly M[62] GC..TTA.CGG Known: Hap1 down 1 34 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[62] GC..TTA.CGG Known: Hap1 down 1 34 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[62] GC..TTA.CGG Known: Hap1 down 1 34 YOR214C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 34 YLR352W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 34 YGR240C PFK1 phosphofructokinase alpha subunit M[62] GC..TTA.CGG Known: Hap1 down 1 34 YGR096W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 34 YPL098C Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 34 YJL124C LSM1 involved in mRNA stablity M[62] GC..TTA.CGG Known: Hap1 down 1 34 YER164W CHD1 transcriptional regulator M[62] GC..TTA.CGG Known: Hap1 down 1 33 YCR031C RPS14A Ribosomal protein S14A (rp59A) M[62] GC..TTA.CGG Known: Hap1 down 1 33 YGR031W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 33 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[62] GC..TTA.CGG Known: Hap1 down 1 33 YPL216W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 33 YER041W YEN1 M[62] GC..TTA.CGG Known: Hap1 down 1 33 YIL006W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 33 YDR351W SBE2 involved in bud growth M[62] GC..TTA.CGG Known: Hap1 down 1 33 YOL020W TAT2 Tryptophan permease, high affinity M[62] GC..TTA.CGG Known: Hap1 down 1 33 YPL222W Hypothetical ORF M[62] GC..TTA.CGG Known: Hap1 down 1 33 YMR104C YPK2 protein kinase M[62] GC..TTA.CGG Known: Hap1 down 1 33 YIL085C KTR7 (putative) mannosyltransferase M[62] GC..TTA.CGG Known: Hap1 down 1 33 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[62] GC..TTA.CGG Known: Hap1 down 1 32 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[62] GC..TTA.CGG Known: Hap1 down 1 32 YNR003C RPC34 34-kDa subunit of RNA polymerase III (C) M[62] GC..TTA.CGG Known: Hap1 down 1 32 YGR284C ERV29 ER-Golgi transport vesicle protein M[62] GC..TTA.CGG Known: Hap1 down 1 31 YOL051W GAL11 Component of the RNA polymerase II holoenzyme complex, positive and negative transcriptional regulator of genes involved in mating-type specialization M[62] GC..TTA.CGG Known: Hap1 down 1 31 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[62] GC..TTA.CGG Known: Hap1 down 1 31 YDR183W PLP1 Phosducin-Like Protein M[62] GC..TTA.CGG Known: Hap1 down 1 31 YDR184C ATC1 nuclear protein that interacts with Aip3 M[62] M[63] GGCS.....G...CGCG Known: mbp1-like down 2 64 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[63] GGCS.....G...CGCG Known: mbp1-like down 1 58 YJR044C VPS55 YJR044c M[63] GGCS.....G...CGCG Known: mbp1-like down 1 58 YJR054W Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 58 YDR059C UBC5 ubiquitin-conjugating enzyme M[63] GGCS.....G...CGCG Known: mbp1-like down 1 52 YOL020W TAT2 Tryptophan permease, high affinity M[63] GGCS.....G...CGCG Known: mbp1-like down 1 48 YMR231W PEP5 peripheral vaculor membrane protein; putative Zn-finger protein M[63] GGCS.....G...CGCG Known: mbp1-like down 1 45 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[63] GGCS.....G...CGCG Known: mbp1-like down 1 45 YCR063W BUD31 M[63] GGCS.....G...CGCG Known: mbp1-like down 1 45 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[63] GGCS.....G...CGCG Known: mbp1-like down 1 44 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[63] GGCS.....G...CGCG Known: mbp1-like down 1 42 YHR182W Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 41 YDR225W HTA1 Histone H2A (HTA1 and HTA2 code for nearly identical proteins) M[63] GGCS.....G...CGCG Known: mbp1-like down 1 41 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[63] GGCS.....G...CGCG Known: mbp1-like down 1 41 YEL020C Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 41 YEL020W-A TIM9 mitochondrial inner membrane translocase M[63] GGCS.....G...CGCG Known: mbp1-like down 1 41 YLR091W Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 40 YDR212W TCP1 chaperonin subunit alpha M[63] GGCS.....G...CGCG Known: mbp1-like down 1 38 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[63] GGCS.....G...CGCG Known: mbp1-like down 1 38 YEL046C GLY1 Threonine Aldolase M[63] GGCS.....G...CGCG Known: mbp1-like down 1 38 YIL024C Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 38 YJR106W ECM27 (putative) involved in cell wall biogenesis M[63] GGCS.....G...CGCG Known: mbp1-like down 1 38 YKL098W Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 38 YGR059W SPR3 septin protein involved in sporulation M[63] GGCS.....G...CGCG Known: mbp1-like down 1 35 YER027C GAL83 glucose repression protein, a component of the Snf1 complex M[63] GGCS.....G...CGCG Known: mbp1-like down 1 34 YJR031C GEA1 GDP/GTP exchange factor M[63] GGCS.....G...CGCG Known: mbp1-like down 1 34 YJL157C FAR1 Cdc28p kinase inhibitor M[63] GGCS.....G...CGCG Known: mbp1-like down 1 34 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[63] GGCS.....G...CGCG Known: mbp1-like down 1 32 YDR061W Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 32 YMR010W Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 31 YLR401C Hypothetical ORF M[63] GGCS.....G...CGCG Known: mbp1-like down 1 31 YOR337W TEA1 Ty1 enhancer activator M[63] GGCS.....G...CGCG Known: mbp1-like down 1 30 YBR196C PGI1 Glucose-6-phosphate isomerase M[63] M[64] TTCTC.......CGC Novel: SOK2 down 2 73 YMR183C SSO2 post-Golgi t-SNARE M[64] TTCTC.......CGC Novel: SOK2 down 2 71 YPR183W DPM1 dolichol phosphate mannose synthase M[64] TTCTC.......CGC Novel: SOK2 down 2 71 YGL073W HSF1 heat shock transcription factor M[64] TTCTC.......CGC Novel: SOK2 down 2 70 YER176W ECM32 DNA Helicase I M[64] TTCTC.......CGC Novel: SOK2 down 1 48 YNL076W MKS1 negative regulator of Ras cAMP pathway, shares weak homology with Spt2p M[64] TTCTC.......CGC Novel: SOK2 down 1 47 YPL077C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 46 YDR310C SUM1 nuclear protein involved in silencing M[64] TTCTC.......CGC Novel: SOK2 down 1 45 YJL129C TRK1 180 kDa high affinity potassium transporter M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YML071C DOR1 Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YER156C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YMR010W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YLR403W SFP1 split zinc finger protein M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YDR085C AFR1 cytoskeletal protein, similar to arrestins M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YER005W YND1 apyrase (NDPase/NTPase) M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YER048C CAJ1 homologous to E. coli DnaJ M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YPR184W GDB1 Glycogen debranching enzyme M[64] TTCTC.......CGC Novel: SOK2 down 1 41 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YPL267W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YDR185C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YLR401C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YNL054W VAC7 Integral vacuolar membrane protein M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YCL014W BUD3 involved in bud site selection M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YCL011C GBP2 Protein with RNA recognition motifs M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YMR117C SPC24 component of spindle pole M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YJR129C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 40 YGL077C HNM1 Transporter (permease) for choline and nitrogen mustard; share homology with UGA4 M[64] TTCTC.......CGC Novel: SOK2 down 1 39 YML094W GIM5 bovine prefoldin subunit 5 homolog (putative) M[64] TTCTC.......CGC Novel: SOK2 down 1 39 YPL063W Protein required for cell viability M[64] TTCTC.......CGC Novel: SOK2 down 1 39 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[64] TTCTC.......CGC Novel: SOK2 down 1 39 YBR067C TIP1 cell wall mannoprotein M[64] TTCTC.......CGC Novel: SOK2 down 1 39 YDR482C CWC21 YDR482C M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YLR049C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YLR048W RPS0B Ribosomal protein S0B M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YER023W PRO3 delta 1-pyrroline-5-carboxylate reductase M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YGR111W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YPL219W PCL8 cyclin (Pho85p) M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YBR126C TPS1 56 kD synthase subunit of trehalose-6-phosphate synthase/phosphatase complex M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YJR053W BFA1 similar to Byr4 M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YNL200C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YBR265W TSC10 3-ketosphinganine reductase M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YEL043W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YJL164C TPK1 putative catalytic subunit of cAMP-dependent protein kinase M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YBL029C-A Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YLL028W TPO1 polyamine transport protein M[64] TTCTC.......CGC Novel: SOK2 down 1 38 YGR248W SOL4 similar to SOL3 M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YBR122C MRPL36 Mitochondrial ribosomal protein MRPL36 (YmL36) M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YOR185C GSP2 GTP binding protein, almost identical to Gsp1p M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YOR184W SER1 phosphoserine transaminase M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YPR122W AXL1 putative homolog of human insulin-degrading endoprotease M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YPR093C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YOL034W Protein required for cell viability M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YGL192W IME4 mRNA methyltransferase (putative) M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YHR120W MSH1 mutS homolog involved in mitochondrial DNA repair M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YKR077W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 37 YPR135W CTF4 DNA polymerase alpha binding protein M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YLR095C IOC2 ISWI One Complex M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YNL072W RNH35 RNase H(35), a 35 kDa ribonuclease H M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YGR013W SNU71 U1 snRNP protein M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YGL097W SRM1 pheromone response pathway suppressor M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YMR185W Protein required for cell viability M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YMR198W CIK1 spindle pole body associated protein M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YMR273C ZDS1 peripheral plasma membrane protein M[64] TTCTC.......CGC Novel: SOK2 down 1 36 YDR208W MSS4 Phosphatidylinositol 4-phosphate kinase M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YDR339C Protein required for cell viability M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YHR102W KIC1 PAK/Ste20 kinase family M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YGL083W SCY1 similar to bovine rhodopsin kinase; suppressor of GTPase mutation M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YCR073C SSK22 protein kinase M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YNL002C RLP7 Protein with similarity to ribosomal proteins including Rpl6p M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YIL104C SHQ1 Essential protein involved in snoRNA accumulation. M[64] TTCTC.......CGC Novel: SOK2 down 1 35 YNL197C WHI3 Putative RNA binding protein M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YDR013W Protein required for cell viability M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YKR090W PXL1 Paxillin-like protein M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YBR020W GAL1 galactokinase M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YAL017W FUN31 Serine/threonine kinase M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YOR276W CAF20 mRNA cap-binding protein (eIF4F) 20K subunit M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YGR112W SHY1 mitochondrial protein with homology to the mammalian SURF-1 gene M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YBR201W DER1 involved in degradation in the ER M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YBR086C IST2 Probable transmembrane protein M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YGR059W SPR3 septin protein involved in sporulation M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YKL143W LTV1 low temperature viability protein M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YNL328C MDJ2 Mitochindrial chaperonin M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YKR005C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YPL067C Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YNL259C ATX1 Putative copper binding/homeostasis protein M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YMR104C YPK2 protein kinase M[64] TTCTC.......CGC Novel: SOK2 down 1 34 YML074C FPR3 Prolyl cis-trans isomerase, also called proline rotamase or peptidylprolyl cis-trans isomerase (PPIase) M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YFL005W SEC4 Ras-like small GTP-binding protein M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YPL155C KIP2 kinesin-related protein M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YOL020W TAT2 Tryptophan permease, high affinity M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YGL027C CWH41 glucosidase I M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YHR177W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YPR119W CLB2 G(sub)2-specific B-type cyclin M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YPR120C CLB5 B-type cyclin M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YDR329C PEX3 48-kDa peroxisomal integral membrane protein M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YPR037C ERV2 M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[64] TTCTC.......CGC Novel: SOK2 down 1 33 YIR032C DAL3 ureidoglycolate hydrolase M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YIL132C CSM2 Protein required for meiotic chromosome segregation M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YBL013W FMT1 Methionyl-tRNA Transformylase M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YPL133C RDS2 Transcriptional regulator M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YOR313C SPS4 sporulation-specific protein M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YJL109C UTP10 Protein required for cell viability M[64] TTCTC.......CGC Novel: SOK2 down 1 32 YGR096W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YPL239W YAR1 YAR1 encodes a 200-amino-acid protein with two ANK repeat motifs and an acidic C terminus rich in PEST-like sequences M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YNR023W SNF12 73 kDa subunit of the SWI/SNF transcription activation complex, homolog of Rsc6p subunit of the RSC chromatin remodeling complex M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YBL038W MRPL16 Mitochondrial ribosomal protein MRPL16 M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YMR147W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YPR057W BRR1 Spliceosomal snRNP component M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YNL110C NOP15 ribosome biogenesis protein M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YNL092W Hypothetical ORF M[64] TTCTC.......CGC Novel: SOK2 down 1 31 YNL243W SLA2 transmembrane protein M[64] TTCTC.......CGC Novel: SOK2 down 1 30 YDR456W NHX1 Na+/H+ exchanger M[64] TTCTC.......CGC Novel: SOK2 down 1 30 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[64] M[65] SCGK....KCGD Novel: No cat down 1 41 YMR262W Hypothetical ORF M[65] SCGK....KCGD Novel: No cat down 1 40 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[65] SCGK....KCGD Novel: No cat down 1 40 YCL009C ILV6 Small regulatory subunit of Acetolactate synthase M[65] SCGK....KCGD Novel: No cat down 1 40 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[65] SCGK....KCGD Novel: No cat down 1 40 YPL268W PLC1 phosphoinositide-specific phospholipase C M[65] SCGK....KCGD Novel: No cat down 1 40 YOR337W TEA1 Ty1 enhancer activator M[65] SCGK....KCGD Novel: No cat down 1 40 YPR037C ERV2 M[65] SCGK....KCGD Novel: No cat down 1 40 YPR036W VMA13 vacuolar ATPase V1 domain subunit H (54 kDa) M[65] SCGK....KCGD Novel: No cat down 1 40 YPR169W Protein required for cell viability M[65] SCGK....KCGD Novel: No cat down 1 40 YCR063W BUD31 M[65] SCGK....KCGD Novel: No cat down 1 40 YPL076W GPI2 involved in N-acetylglucosaminylphosphatidylinositol synthesis M[65] SCGK....KCGD Novel: No cat down 1 40 YBR133C HSL7 regulator of Swe1p kinase M[65] SCGK....KCGD Novel: No cat down 1 40 YGL126W SCS3 involved in inositol biosynthesis M[65] SCGK....KCGD Novel: No cat down 1 40 YDL085W NDE2 Hypothetical ORF M[65] SCGK....KCGD Novel: No cat down 1 40 YHR047C AAP1' arginine/alanine aminopeptidase M[65] SCGK....KCGD Novel: No cat down 1 40 YBL071W-A Similar to Hemiascomycetous yeast protein (FEBS Lett. 487(1): 31-36 (2000)). M[65] SCGK....KCGD Novel: No cat down 1 40 YCR011C ADP1 Active transport ATPase M[65] SCGK....KCGD Novel: No cat down 1 39 YMR183C SSO2 post-Golgi t-SNARE M[65] SCGK....KCGD Novel: No cat down 1 39 YLR401C Hypothetical ORF M[65] SCGK....KCGD Novel: No cat down 1 38 YOR039W CKB2 Casein kinase II, beta' subunit M[65] SCGK....KCGD Novel: No cat down 1 38 YDL160C DHH1 (putative) DEAD box RNA helicase M[65] SCGK....KCGD Novel: No cat down 1 38 YDL161W ENT1 Ent1p M[65] SCGK....KCGD Novel: No cat down 1 37 YBR052C Hypothetical ORF M[65] SCGK....KCGD Novel: No cat down 1 37 YPL155C KIP2 kinesin-related protein M[65] SCGK....KCGD Novel: No cat down 1 37 YKL079W SMY1 kinesin heavy chain homolog M[65] SCGK....KCGD Novel: No cat down 1 37 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[65] SCGK....KCGD Novel: No cat down 1 36 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[65] SCGK....KCGD Novel: No cat down 1 34 YBL033C RIB1 GTP cyclohydrolase II M[65] SCGK....KCGD Novel: No cat down 1 34 YKL126W YPK1 76.5 kDa Serine/threonine protein kinase with similarity to protein kinase C, is 90% identical to Ypk2p M[65] SCGK....KCGD Novel: No cat down 1 34 YML037C Hypothetical ORF M[65] SCGK....KCGD Novel: No cat down 1 33 YER110C KAP123 Karyopherin beta 4 M[65] SCGK....KCGD Novel: No cat down 1 33 YGR093W Hypothetical ORF M[65] SCGK....KCGD Novel: No cat down 1 31 YPR079W MRL1 M[65] SCGK....KCGD Novel: No cat down 1 31 YPL001W HAT1 histone acetyltransferase M[65] SCGK....KCGD Novel: No cat down 1 31 YGR245C SDA1 Severe Depolymerization of Actin M[65] SCGK....KCGD Novel: No cat down 1 31 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[65] SCGK....KCGD Novel: No cat down 1 31 YMR202W ERG2 C-8 sterol isomerase M[65] SCGK....KCGD Novel: No cat down 1 30 YIL132C CSM2 Protein required for meiotic chromosome segregation M[65] SCGK....KCGD Novel: No cat down 1 30 YKL029C MAE1 mitochondrial malic enzyme M[65] SCGK....KCGD Novel: No cat down 1 30 YLR378C SEC61 membrane component of ER protein translocation apparatus M[65] SCGK....KCGD Novel: No cat down 1 30 YBR069C TAT1 Amino acid transport protein for valine, leucine, isoleucine, and tyrosine M[65] M[66] AATATTCTT Novel: Downstream facilitators down 2 101 YDL161W ENT1 Ent1p M[66] AATATTCTT Novel: Downstream facilitators down 2 101 YDL160C DHH1 (putative) DEAD box RNA helicase M[66] AATATTCTT Novel: Downstream facilitators down 2 85 YHR162W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 2 81 YNL197C WHI3 Putative RNA binding protein M[66] AATATTCTT Novel: Downstream facilitators down 2 81 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[66] AATATTCTT Novel: Downstream facilitators down 2 81 YPL134C ODC1 M[66] AATATTCTT Novel: Downstream facilitators down 2 81 YPL135W ISU1 Iron-sulfur cluster nifU-like protein M[66] AATATTCTT Novel: Downstream facilitators down 2 81 YGL187C COX4 subunit IV of cytochrome c oxidase M[66] AATATTCTT Novel: Downstream facilitators down 2 79 YOR205C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 2 79 YOR204W DED1 ATP-dependent RNA helicase of DEAD box family M[66] AATATTCTT Novel: Downstream facilitators down 2 78 YOR021C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 2 77 YJR077C MIR1 Product of gene unknown M[66] AATATTCTT Novel: Downstream facilitators down 2 77 YLR199C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 2 77 YLR197W SIK1 homology to microtubule binding proteins and to X90565_5.cds M[66] AATATTCTT Novel: Downstream facilitators down 2 76 YER178W PDA1 alpha subunit of pyruvate dehydrogenase (E1 alpha) M[66] AATATTCTT Novel: Downstream facilitators down 2 75 YLR356W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 2 75 YDR451C YHP1 M[66] AATATTCTT Novel: Downstream facilitators down 2 75 YDR450W RPS18A Ribosomal protein S18A M[66] AATATTCTT Novel: Downstream facilitators down 2 74 YER044C ERG28 M[66] AATATTCTT Novel: Downstream facilitators down 2 73 YBL066C SEF1 putative transcription factor M[66] AATATTCTT Novel: Downstream facilitators down 2 73 YMR198W CIK1 spindle pole body associated protein M[66] AATATTCTT Novel: Downstream facilitators down 2 71 YJR045C SSC1 Mitochondrial matrix protein involved in protein import; subunit of SceI endonuclease M[66] AATATTCTT Novel: Downstream facilitators down 2 70 YGR147C NAT2 N alpha-acetyltransferase that acts on methionine termini M[66] AATATTCTT Novel: Downstream facilitators down 2 70 YMR106C YKU80 Exhibits DNA binding activity on its own, associates with Hdf1p to form major DNA end-binding complex M[66] AATATTCTT Novel: Downstream facilitators down 2 69 YER164W CHD1 transcriptional regulator M[66] AATATTCTT Novel: Downstream facilitators down 2 69 YLR307W CDA1 Chitin Deacetylase M[66] AATATTCTT Novel: Downstream facilitators down 2 68 YOL097C WRS1 cytoplasmic tryptophanyl-tRNA synthetase M[66] AATATTCTT Novel: Downstream facilitators down 2 68 YJL177W RPL17B Ribosomal protein L17B (L20B) (YL17) M[66] AATATTCTT Novel: Downstream facilitators down 2 68 YJL176C SWI3 transcription factor M[66] AATATTCTT Novel: Downstream facilitators down 2 67 YKL121W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 2 67 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[66] AATATTCTT Novel: Downstream facilitators down 2 66 YDR034C LYS14 transcription factor involved in lysine biosynthesis M[66] AATATTCTT Novel: Downstream facilitators down 2 66 YDR033W MRH1 Membrane protein Related to Hsp30p; Localized by immunofluorescence to cell membranes, primarily the plasma membrane. A punctuate immunofluorescence pattern was observed within cell buds. The nuclear envelope, but not the vacuole or mitochondrial membranes, are also immunostained. M[66] AATATTCTT Novel: Downstream facilitators down 2 66 YGL234W ADE5,7 glycinamide ribotide synthetase and aminoimidazole ribotide synthetase M[66] AATATTCTT Novel: Downstream facilitators down 2 65 YBL051C PIN4 M[66] AATATTCTT Novel: Downstream facilitators down 2 64 YOR311C HSD1 ER membrane protein M[66] AATATTCTT Novel: Downstream facilitators down 2 64 YMR183C SSO2 post-Golgi t-SNARE M[66] AATATTCTT Novel: Downstream facilitators down 2 62 YOL041C NOP12 NucleOlar Protein; isolated as a mutant exhibiting synthetic lethality with a nop2 ts allele. M[66] AATATTCTT Novel: Downstream facilitators down 2 62 YOL042W NGL1 DNase/RNase (putative); CCR4 C-terminal homolog, homology to drosophila Angel gene M[66] AATATTCTT Novel: Downstream facilitators down 1 56 YGL073W HSF1 heat shock transcription factor M[66] AATATTCTT Novel: Downstream facilitators down 1 55 YMR146C TIF34 p39 subunit of translation initiation factor eIF3 M[66] AATATTCTT Novel: Downstream facilitators down 1 54 YNL055C POR1 Outer mitochondrial membrane porin (voltage-dependent anion channel, or VDAC) M[66] AATATTCTT Novel: Downstream facilitators down 1 54 YNL056W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 51 YCR023C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 51 YGL095C VPS45 cytosolic and peripheral membrane protein M[66] AATATTCTT Novel: Downstream facilitators down 1 51 YGL096W TOS8 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 51 YHL030W ECM29 involved in cell wall biogenesis M[66] AATATTCTT Novel: Downstream facilitators down 1 51 YHL029C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 51 YPL109C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 50 YBR188C NTC20 splicing factor M[66] AATATTCTT Novel: Downstream facilitators down 1 50 YBR187W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 50 YDL181W INH1 ATPase inhibitor M[66] AATATTCTT Novel: Downstream facilitators down 1 50 YDL179W PCL9 Cyclin M[66] AATATTCTT Novel: Downstream facilitators down 1 49 YKL062W MSN4 zinc finger protein M[66] AATATTCTT Novel: Downstream facilitators down 1 49 YDR148C KGD2 dihydrolipoyl transsuccinylase component of alpha-ketoglutarate dehydrogenase complex in mitochondria M[66] AATATTCTT Novel: Downstream facilitators down 1 49 YDR147W EKI1 Ethanolamine Kinase M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YLR224W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YLR225C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YPL079W RPL21B Ribosomal protein L21B M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YPL078C ATP4 F(1)F(0)-ATPase complex delta subunit, mitochondrial M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YIL160C POT1 peroxisomal 3-oxoacyl CoA thiolase M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YIL161W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YOL077C BRX1 Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 48 YOL077W-A ATP19 Subunit k homolog of ATP synthase M[66] AATATTCTT Novel: Downstream facilitators down 1 47 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[66] AATATTCTT Novel: Downstream facilitators down 1 47 YMR199W CLN1 G(sub)1 cyclin M[66] AATATTCTT Novel: Downstream facilitators down 1 47 YJR085C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 47 YJR084W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 46 YHR096C HXT5 hexose transporter M[66] AATATTCTT Novel: Downstream facilitators down 1 46 YHR061C GIC1 interacts with GTPase, involved in bud emergence M[66] AATATTCTT Novel: Downstream facilitators down 1 46 YHR060W VMA22 vacuolar H+-ATPase assembly protein M[66] AATATTCTT Novel: Downstream facilitators down 1 45 YPL250C ICY2 interacting with the cytoskeleton M[66] AATATTCTT Novel: Downstream facilitators down 1 44 YLR295C ATP14 ATP synthase subunit h M[66] AATATTCTT Novel: Downstream facilitators down 1 43 YBR268W MRPL37 Probable mitochondrial protein L37 M[66] AATATTCTT Novel: Downstream facilitators down 1 43 YBR269C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 43 YDL019C OSH2 Oxysterol Binding Protein M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YMR288W HSH155 M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YKL178C STE3 a factor recptor M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YKL013C ARC19 involved in cortical actin patch integrity M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YMR065W KAR5 coiled-coil membrane protein M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YOL039W RPP2A 60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha) M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YML059C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 42 YML060W OGG1 43-kDa 8-oxo-guanine DNA glycosylase M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YPL015C HST2 similar to Sir2p M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YPL016W SWI1 Zinc-finger transcription factor M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YAL003W EFB1 Translation elongation factor EF-1beta, GDP/GTP exchange factor for Tef1p/Tef2p M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YKL016C ATP7 ATP synthase d subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YLR312C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YDR501W PLM2 PLasmid Maintenance M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YDR502C SAM2 S-adenosylmethionine synthetase M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YBR071W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YBL030C PET9 mitochondrial ADP/ATP translocator M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YBL031W SHE1 Product of gene unknown M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YPR008W HAA1 Homolog of Ace1 Activator M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YNR051C BRE5 protein of unknown function M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YKL109W HAP4 transcriptional activator protein of CYC1 (component of HAP2/HAP3 heteromer) M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YGR055W MUP1 high affinity methionine permease M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YDR397C NCB2 repressor of class II transcription M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YDR395W SXM1 Sxm1p shares similarity with Cse1p homologs including Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1; Sxm1p also shares homology with the karyopherin, Kap95p; Sxm1p is primarily a nuclear protein M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YNL024C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YOR023C AHC1 protein of the Ada histone acetyltransferase complex M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YCR083W TRX3 mitochondrial thioredoxin M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YOL047C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YCR084C TUP1 glucose repression regulatory protein, exhibits similarity to beta subunits of G proteins M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YKL009W MRT4 involved in mRNA decay M[66] AATATTCTT Novel: Downstream facilitators down 1 41 YKL008C LAC1 Homolog of the LAG1 longevity gene. M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YIL019W Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YER109C FLO8 putative transcriptional activator of FLO1 M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YER053C sequence similarity to mitochondrial phosphate transporters M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YEL050C RML2 mitochondrial ribosomal protein L2 of the large subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YEL051W VMA8 vacuolar ATPase V1 domain subunit D M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YDR429C TIF35 translation initiation factor eIF3 subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YMR003W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YKR090W PXL1 Paxillin-like protein M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YGL057C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YGL058W RAD6 Ubiquitin conjugating (E2) enzyme. The C-terminal 23 residues are critical for sporulation and histone polyubiquitinating activity, but not UV repair or induced mutagenesis. M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YBR196C PGI1 Glucose-6-phosphate isomerase M[66] AATATTCTT Novel: Downstream facilitators down 1 40 YFL008W SMC1 SMC chromosomal ATPase family member M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YIL023C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YIL003W DRE3 Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YIL002C INP51 phosphatidylinositol 4,5-bisphosphate 5-phosphatase M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YOR125C CAT5 may encode a protein involved in one or more monoxygenase or hydroxylase steps of ubiquinone biosynthesis M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YJL047C RTT101 Regulator of Ty1 Transposition M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YGR225W AMA1 Required for sporulation; highly induced during sporulation M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YDL218W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YDL217C TIM22 Mitochondrial inner membrane protein involved in import M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YDR212W TCP1 chaperonin subunit alpha M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YLR196W PWP1 similar to beta-transducin superfamily M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YDR437W Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YJL018W Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YHL020C OPI1 negative regulator of phospholipid biosynthesis M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YPR117W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 39 YDL138W RGT2 glucose permease M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YOR215C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YNL191W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YPR125W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YPL271W ATP15 nuclear gene for ATP synthase epsilon subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YOR361C PRT1 translation initiation factor eIF3 subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YNL092W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YNL312W RFA2 subunit 2 of replication factor RF-A; 29% identical to the human p34 subunit of RF-A M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YNL311C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YHR037W PUT2 delta-1-pyrroline-5-carboxylate dehydrogenase M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YGL031C RPL24A Ribosomal protein L24A (rp29) (YL21) (L30A) M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YPL145C KES1 sequence similar to Hes1p M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YNL182C Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YJL129C TRK1 180 kDa high affinity potassium transporter M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YDL139C SCM3 Suppressor of chromosome missegregation M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YCR005C CIT2 non-mitochondrial citrate synthase M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YHR085W Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YBL072C RPS8A Ribosomal protein S8A (S14A) (rp19) (YS9) M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YDR123C INO2 helix-loop-helix protein M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YDR122W KIN1 Serine/threonine protein kinase M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YER072W VTC1 Homolog of S. pombe Nrf1 (97% identical in predicted amino acid sequence), which was identified in a genetic screen by its ability to reverse the Cdc42p suppression of a cdc24-4ts mutant M[66] AATATTCTT Novel: Downstream facilitators down 1 38 YAL017W FUN31 Serine/threonine kinase M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YIR028W DAL4 allantoin permease M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YMR043W MCM1 transcription factor containing the 56 amino-acid MADS (MCM1, AG, DEFAm SRF)-box motif within its DNA binding domain, plays a central role in the formation of both repressor and activator complexes M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YDL156W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YAL046C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YMR148W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YPL221W BOP1 Bypass of PAM1 M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YPR191W QCR2 40 kDa ubiquinol cytochrome-c reductase core protein 2 M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YNL088W TOP2 topoisomerase II, Top2p localizes to axial cores in meiosis M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YLR383W RHC18 involved in recombination repair M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YLR384C IKI3 required for killer toxin sensitivity M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YBR153W RIB7 Riboflavin biosynthesis protein M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YBR154C RPB5 25-kDa RNA polymerase subunit (common to polymerases I, II and III) M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YGL067W NPY1 NADH pyrophosphatase 1 M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YJL109C UTP10 Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YNL099C OCA1 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YNL100W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YGR059W SPR3 septin protein involved in sporulation M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YKL184W SPE1 Ornithine decarboxylase M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YNL234W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YCR079W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YGL228W SHE10 lethal when overexpressed M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YDR297W SUR2 Syringomycin response protein 2 M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YDR298C ATP5 ATP synthase subunit 5; oligomycin sensitivity-conferring protein M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YDR110W FOB1 DNA replication fork blocking protein M[66] AATATTCTT Novel: Downstream facilitators down 1 37 YDR111C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YDR003W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YER051W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YER052C HOM3 Aspartate kinase (L-aspartate 4-P-transferase) (EC 2.7.2.4) M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YMR219W ESC1 involved in silencing M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YPL229W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YPL178W CBC2 Small subunit of the nuclear cap binding complex M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YPL177C CUP9 putative DNA binding protein which shows similarity in homeobox domain to human proto-oncogene PBX1 M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YDR100W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YDR101C ARX1 M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YMR255W GFD1 GREAT for FULL DEAD box protein activity M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YMR256C COX7 subunit VII of cytochrome c oxidase M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YDR270W CCC2 Cu(2+)-transporting ATPase M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YBR050C REG2 putative Glc7 regulatory subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YKL148C SDH1 flavoprotein subunit of succinate dehydrogenase M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YNL163C RIA1 M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YNL254C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YMR275C BUL1 Rsp5p ubiquitin ligase binding protein M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YLR313C SPH1 homologous to Spa2p, localizes to sites of polarized growth M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YLR312W-A MRPL15 Mitochondrial ribosomal protein MRPL15 (YmL15) M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YLR055C SPT8 transcription factor, probable member of histone acetyltransferase SAGA complex M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YGL027C CWH41 glucosidase I M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YBL099W ATP1 mitochondrial F1F0-ATPase alpha subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YJL099W CHS6 involved in chitin biosynthesis M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YJR030C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YOR375C GDH1 NADP-specific glutamate dehydrogenase M[66] AATATTCTT Novel: Downstream facilitators down 1 36 YOR374W ALD4 mitochondrial aldehyde dehydrogenase M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YDR387C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YDR386W MUS81 involved in DNA repair, interacts with Rad54 M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YDR049W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YDR050C TPI1 triosephosphate isomerase M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YKL127W PGM1 phosphoglucomutase, minor isoform M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YMR105C PGM2 Phosphoglucomutase M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YBL106C SRO77 yeast homolog of the Drosphila tumor suppressor, lethal giant larvae M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YPL011C TAF3 component of TAF(II) complex M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YPL012W RRP12 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YKL029C MAE1 mitochondrial malic enzyme M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YCR046C IMG1 mitochondrial ribosomal protein M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YPR015C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YNR052C POP2 Putative transcription factor M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YLR042C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YAR019C CDC15 protein kinase domain M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YLR249W YEF3 EF-3 (translational elongation factor 3) M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YJL102W MEF2 mitochondrial elongation factor G-like protein M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YJL101C GSH1 gamma-glutamylcysteine synthetase M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YCR065W HCM1 Transcription factor (fork head domain) M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YJR140C HIR3 regulator of histone transcription M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YOL113W SKM1 serine/threonine protein kinase M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YKL188C PXA2 peroxisomal ABC transporter 2 M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YKL189W HYM1 The homologue in Aspergillus nidulans, hymA, is involved in development, see Karos, M. and Fischer, R. (1996). hymA (hypha-like metulae), a new developmental mutant of Aspergillus nidulans. Microbiol. 142:3211-3218. M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YHL032C GUT1 glyerol kinase (converts glycerol to glycerol-3-phosphate M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YGL063W PUS2 pseudouridine synthase 2 M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YJL146W IDS2 (putative) involved in meiosis M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YDL202W MRPL11 Mitochondrial ribosomal protein MRPL11 (YmL11) M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YBR028C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 35 YNL218W MGS1 M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YMR030W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YMR031C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YKR017C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YKR016W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YGR201C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YMR197C VTI1 Vti1p is a v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YMR196W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YDR436W PPZ2 serine-threonine phosphatase Z M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YNL016W PUB1 poly(A)+ RNA-binding protein M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YIL040W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YFR032C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YJL163C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YBR091C MRS5 Nuclear protein involved in mitochondrial intron splicing M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YAL024C LTE1 putative GTP-exchange protein M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YNL061W NOP2 90-kDa protein, located in nucleolus, that is homologous to a human proliferation-associated nucleolar protein, p120 M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YNL059C ARP5 Actin-related protein M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YGL250W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YGR032W GSC2 catalytic component of 1,3-beta-D-glucan synthase M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YGR033C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YNR036C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 34 YER083C Protein involved in cell wall function M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YGR096W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YML031W NDC1 Nuclear envelope protein with multiple putative transmembrane domains M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YGR062C COX18 required for mitochondrial cytochrome oxidase activity M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YJR060W CBF1 basic helix-loop-helix protein M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YGR177C ATF2 Alcohol acetyltransferase M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YLR203C MSS51 involved in maturation of COX1 and COB mRNA M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YPR074C TKL1 Transketolase 1 M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YHR103W SBE22 involved in bud growth M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YMR253C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YLR324W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YLR325C RPL38 Ribosomal protein L38 M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YMR321C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YGL253W HXK2 Hexokinase II (PII) (also called Hexokinase B) M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YGL252C RTG2 involved in interorganelle communication between mitochondria, peroxisomes, and nucleus M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YOR035C SHE4 Required for mother cell-specific HO expression M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YIL006W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YDR488C PAC11 similar to rat dynein intermediate chain M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YBR158W CST13 Chromosome STability M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YOR056C NOB1 Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YGR003W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YML071C DOR1 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YKR011C TOS5 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YEL023C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YEL024W RIP1 Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YLL022C HIF1 interacts with histone acetyltransferase M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YBR078W ECM33 Homolog to sporulation specific protein SPS2 (S. cerevisiae) M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YBR079C RPG1 translation initiation factor eIF3 M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YDR084C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YDR083W RRP8 M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YDR277C MTH1 Protein is 61% identical to Msn3p M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YEL043W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YOR039W CKB2 Casein kinase II, beta' subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YJL049W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YJL048C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YMR163C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YLR449W FPR4 60 kDa nuclear FK506 binding protein M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YMR225C MRPL44 Mitochondrial ribosomal protein MRPL44 (YmL44) M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YMR056C AAC1 mitochondrial ADP/ATP translocator M[66] AATATTCTT Novel: Downstream facilitators down 1 33 YDR087C RRP1 involved in rRNA processing M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YIL144W TID3 Product of gene unknown M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YIL143C SSL2 DNA helicase homolog; homolog of human XPBC, ERCC3 M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL077W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL307C MCK1 43.1 kDa Serine/threonine/tyrosine protein kinase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YKL061W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YKL060C FBA1 aldolase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL225C CNM67 Spindle pole body protein involved in nuclear migration M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YIL017C VID28 vacuole import and degradation M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YIL018W RPL2B Ribosomal protein L2B (L5B) (rp8) (YL6) M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YCR038C BUD5 GTP/GDP exchange factor for Rsr1 protein M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YHL036W MUP3 very low affinity methionine permease M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YHL035C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YBL079W NUP170 Nucleoporin highly similar to Nup157p and to mammalian Nup155p (nup170 mutant can be complemented with NUP155) M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YBL078C AUT7 Aut7p has homology to LC3, a microtubule-associated protein from rat. M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDR339C Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YIL073C SPO22 meiosis-specific phospholipase A2 homolog M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YPR024W YME1 Mitochondrial member of the CDC48/PAS1/SEC18 family of ATPases M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YPR025C CCL1 novel cyclin gene; encodes subunits of TFIIK, a subcomplex of transcription factor TFIIH M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDL040C NAT1 N-terminal acetyltransferase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YEL053C MAK10 glucose-repressible protein required for replication of dsRNA virus M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL196C SLZ1 Sporulation-specific protein with a leucine zipper motif M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDL214C PRR2 M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL259C ATX1 Putative copper binding/homeostasis protein M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDR351W SBE2 involved in bud growth M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YKL045W PRI2 p58 polypeptide of DNA primase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YHR142W CHS7 The seventh gene identified that is involved in chitin synthesis; involved in Chs3p export from the ER M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YJL100W LSB6 M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YLR425W TUS1 1307 AA, hydrophilic protein. M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YMR129W POM152 Nuclear pore membrane glycoprotein M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YBL006C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YKL198C PTK1 probable serine/threonine-specific protein kinase (EC 2.7.1.-) M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNR048W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNR049C MSO1 small hydrophilic protein, enriched in microsomal membrane fraction, interacts with Sec1p M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YKR060W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL325C FIG4 Homologous to the ATP/ADP exchanger Sac1p M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YLR445W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL082W PMS1 MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YNL081C Deletion causes slight growth defect, sporulation defect; similar to S. pombe 40S mitochondrial ribosomal protein M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDR158W HOM2 aspartic beta semi-aldehyde dehydrogenase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YEL052W AFG1 ATPase family gene M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YOR359W VTS1 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YPR187W RPO26 subunit common to RNA polymerases I, II, and III M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YOR360C PDE2 low-Km (high-affinity) cAMP phosphodiesterase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YPR188C MLC2 putative light chain for Myo1p M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDR503C LPP1 Lipid phosphate phosphatase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YER048C CAJ1 homologous to E. coli DnaJ M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YHR181W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YBR061C TRM7 2'-O-ribose tRNA anticodon loop methyltransferase M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YMR020W FMS1 Multicopy suppressor of fenpropimorph resistance (fen2 mutant), shows similarity to Candida albicans corticosteroid-binding protein CBP1 M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YMR021C MAC1 metal-binding transcriptional activator M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YOL005C RPB11 RNA polymerase II subunit, homologous to S. pombe Rpb11p subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YMR276W DSK2 ubiquitin-like protein M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YER128W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDR223W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 32 YDR224C HTB1 Histone H2B (HTB1 and HTB2 code for nearly identical proteins) M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YBR237W PRP5 RNA helicase homolog M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YIR027C DAL1 allantoinase M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YBR238C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YOL049W GSH2 Glutathione Synthetase M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YOL048C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YJL158C CIS3 Protein with homology to Hsp150p and Pir1p, Pir2p, and Pir3p M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YJL159W HSP150 Heat shock protein, secretory glycoprotein M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YGR283C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YIR032C DAL3 ureidoglycolate hydrolase M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YLR348C DIC1 mitochondrial dicarboxylate transport protein M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YKL150W MCR1 NADH-cytochrome b5 reductase M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YKL149C DBR1 RNA lariat debranching enzyme M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YPR149W NCE102 Involved in secretion of proteins that lack classical secretory signal sequences M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YPR151C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YBL093C ROX3 RNA polymerase II holoenzyme/mediator subunit M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YBL095W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YHR059W FYV4 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YIL091C Protein required for cell viability M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YIL092W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YCL049C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YDR331W GPI8 (putative) transamidase involved in GPI anchor attachment M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YML089C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YER032W FIR1 Putative participant in 3' mRNA processing M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YER033C ZRG8 zinc regulated gene M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YDR043C NRG1 transcriptional repressor which can bind to UAS-1 in the STA1 promoter and which can interact with Ssn6p M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YGR013W SNU71 U1 snRNP protein M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YJR106W ECM27 (putative) involved in cell wall biogenesis M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YMR107W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YDR073W SNF11 component of SWI/SNF global transcription activator complex M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YER044C-A MEI4 mRNA is meiosis-specific and has 88 bp intron at 5' end spliced independently of MER1. M[66] AATATTCTT Novel: Downstream facilitators down 1 31 YDR245W MNN10 galactosyltransferase M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YHR019C DED81 Asparaginyl-tRNA synthetase M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YPL209C IPL1 Protein kinase M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YML058W-A HUG1 induced by DNA damage and replication arrest M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YLL039C UBI4 ubiquitin M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YOR130C ORT1 amino acid transporter M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YAL025C MAK16 putative nuclear protein M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YER046W SPO73 Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YER047C SAP1 member of the AAA ATPase family of proteins M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YNR033W ABZ1 para-aminobenzoate synthase, PABA synthase M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YKL187C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YOL126C MDH2 cytosolic malate dehydrogenase M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YOL127W RPL25 Ribosomal protein L25 (rpl6L) (YL25) M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YPR167C MET16 3'phosphoadenylylsulfate reductase M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YHL024W RIM4 RNA-binding protein of the RRM class (putative) M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YHL023C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YLR414C Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YLR413W Hypothetical ORF M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YEL036C ANP1 subunit of mannosyltransferase complex M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YDR439W LRS4 involved in rDNA silencing M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YGL078C DBP3 ATP-dependent RNA helicase CA3 of the DEAD/DEAH box family M[66] AATATTCTT Novel: Downstream facilitators down 1 30 YGL079W Hypothetical ORF M[66] M[67] CGCGT........ACG Novel: swi4-varygap down 2 71 YDL226C GCS1 ADP-ribosylation factor GTPase-activating protein (ARF GAP) M[67] CGCGT........ACG Novel: swi4-varygap down 1 55 YDR264C AKR1 Ankyrin repeat-containing protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 55 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[67] CGCGT........ACG Novel: swi4-varygap down 1 54 YNL234W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 44 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[67] CGCGT........ACG Novel: swi4-varygap down 1 42 YMR263W SAP30 M[67] CGCGT........ACG Novel: swi4-varygap down 1 42 YJR031C GEA1 GDP/GTP exchange factor M[67] CGCGT........ACG Novel: swi4-varygap down 1 41 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[67] CGCGT........ACG Novel: swi4-varygap down 1 41 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[67] CGCGT........ACG Novel: swi4-varygap down 1 41 YLR356W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 41 YCL009C ILV6 Small regulatory subunit of Acetolactate synthase M[67] CGCGT........ACG Novel: swi4-varygap down 1 41 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[67] CGCGT........ACG Novel: swi4-varygap down 1 41 YER005W YND1 apyrase (NDPase/NTPase) M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YMR316W DIA1 may be involved in invasive growth, pseudohyphal growth M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YJR115W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YLR401C Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YBR067C TIP1 cell wall mannoprotein M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YDL193W Protein required for cell viability M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YKL038W RGT1 transcriptional repressor and activator M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YDR408C ADE8 glycinamide ribotide transformylase M[67] CGCGT........ACG Novel: swi4-varygap down 1 40 YIL065C FIS1 Involved in mitochondrial division M[67] CGCGT........ACG Novel: swi4-varygap down 1 39 YOL005C RPB11 RNA polymerase II subunit, homologous to S. pombe Rpb11p subunit M[67] CGCGT........ACG Novel: swi4-varygap down 1 39 YNL182C Protein required for cell viability M[67] CGCGT........ACG Novel: swi4-varygap down 1 39 YIL049W DFG10 involved in filamentous growth M[67] CGCGT........ACG Novel: swi4-varygap down 1 38 YER004W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 38 YIL037C PRM2 M[67] CGCGT........ACG Novel: swi4-varygap down 1 38 YAL035W FUN12 97 kDa protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 38 YFL044C Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 37 YFL038C YPT1 Ras-like GTP-binding protein; most similar to mammalian Rab1A protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 37 YPR035W GLN1 glutamine synthetase M[67] CGCGT........ACG Novel: swi4-varygap down 1 37 YIL131C FKH1 forkhead protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YMR178W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YMR273C ZDS1 peripheral plasma membrane protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YJR129C Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YPL249C-A RPL36B Ribosomal protein L36B (L39) (YL39) M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YCR063W BUD31 M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YNL290W RFC3 Subunit 3 of Replication Factor C; homologous to human RFC 36 kDa subunit M[67] CGCGT........ACG Novel: swi4-varygap down 1 36 YDR388W RVS167 (putative) cytoskeletal protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 35 YPL029W SUV3 putative ATP-dependent helicase M[67] CGCGT........ACG Novel: swi4-varygap down 1 35 YMR219W ESC1 involved in silencing M[67] CGCGT........ACG Novel: swi4-varygap down 1 35 YLR357W RSC2 Member of RSC complex. M[67] CGCGT........ACG Novel: swi4-varygap down 1 35 YFR015C GSY1 Glycogen synthase (UDP-gluocse--starch glucosyltransferase) M[67] CGCGT........ACG Novel: swi4-varygap down 1 35 YMR042W ARG80 transcription factor M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YOL135C MED7 Stoichiometric member of mediator complex M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YHR182W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YGR013W SNU71 U1 snRNP protein M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YDR482C CWC21 YDR482C M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YDR454C GUK1 guanylate kinase M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YLR091W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 34 YOR351C MEK1 mRNA is induced in meiosis, encodes a meiosis-specific serine/threonine protein kinase which interacts with and is believed to phosphorylate Hop1p M[67] CGCGT........ACG Novel: swi4-varygap down 1 33 YML013W SEL1 M[67] CGCGT........ACG Novel: swi4-varygap down 1 33 YPR118W Hypothetical ORF M[67] CGCGT........ACG Novel: swi4-varygap down 1 33 YNL103W MET4 member of the leucine zipper family of transcriptional activators M[67] CGCGT........ACG Novel: swi4-varygap down 1 33 YHR195W NVJ1 Vac8p binding protein; nucleus-vacuole junction M[67] CGCGT........ACG Novel: swi4-varygap down 1 32 YBL091C MAP2 methionine aminopeptidase 2 M[67] CGCGT........ACG Novel: swi4-varygap down 1 32 YDR394W RPT3 ATPase (AAA family) component of the 26S proteasome complex M[67] CGCGT........ACG Novel: swi4-varygap down 1 30 YBR162W-A YSY6 involved in the secretory pathway M[67] M[68] CCGHVGGM Novel: No cat down 2 73 YBR117C TKL2 transketolase, homologous to tkl1 M[68] CCGHVGGM Novel: No cat down 1 42 YBL033C RIB1 GTP cyclohydrolase II M[68] CCGHVGGM Novel: No cat down 1 42 YBR136W MEC1 similar to phosphatidylinositol(PI)3-kinases required for DNA damage induced checkpoint responses in G1, S/M, intra S, and G2/M in mitosis M[68] CCGHVGGM Novel: No cat down 1 42 YOL045W Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 42 YGR017W Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 41 YJR059W PTK2 putative serine)/threonine kinase involved in spermine metabolism M[68] CCGHVGGM Novel: No cat down 1 41 YDL214C PRR2 M[68] CCGHVGGM Novel: No cat down 1 41 YBR052C Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 41 YOL026C Protein required for cell viability M[68] CCGHVGGM Novel: No cat down 1 41 YDR221W Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 40 YER066W Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 39 YGL093W SPC105 component of spindle pole M[68] CCGHVGGM Novel: No cat down 1 39 YBR135W CKS1 subunit of the Cdc28 protein kinase M[68] CCGHVGGM Novel: No cat down 1 39 YBR028C Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 39 YHR127W (H)igh copy (S)uppressor of (N)34 dominant negative allele of SEC4. Suppression is very specific to this allele. It has no affect on the analogous YPT1 allele. No homology or known function. M[68] CCGHVGGM Novel: No cat down 1 38 YNL161W CBK1 Protein kinase M[68] CCGHVGGM Novel: No cat down 1 38 YIR036C Hypothetical ORF M[68] CCGHVGGM Novel: No cat down 1 38 YOL135C MED7 Stoichiometric member of mediator complex M[68] CCGHVGGM Novel: No cat down 1 37 YGR248W SOL4 similar to SOL3 M[68] CCGHVGGM Novel: No cat down 1 31 YGR089W putative partner of Rpb8p M[68] CCGHVGGM Novel: No cat down 1 31 YHR036W Protein required for cell viability M[68] M[69] C.yCGCG....ttKTTTT. Novel: No cat down 3 139 YDR059C UBC5 ubiquitin-conjugating enzyme M[69] C.yCGCG....ttKTTTT. Novel: No cat down 3 114 YMR198W CIK1 spindle pole body associated protein M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 72 YMR099C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 54 YPR182W SMX3 Sm or Sm-like snRNP protein M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 54 YHR172W SPC97 spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 53 YDR349C YPS7 GPI-anchored aspartic protease M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 51 YPR016C TIF6 Similar to human translation initiation factor 6 (eIF6) M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 50 YHR102W KIC1 PAK/Ste20 kinase family M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 49 YDR087C RRP1 involved in rRNA processing M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 49 YLR190W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 49 YOR361C PRT1 translation initiation factor eIF3 subunit M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 48 YNR008W LRO1 L = LCAT (Lecithin Cholesterol acyl transferase) R = related O = Open Reading Frame M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 48 YGR054W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 48 YMR306W FKS3 similar to glucan synthase-related proteins of unknown function M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 48 YBR289W SNF5 subunit of the chromatin remodeling Snf/Swi complex M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 47 YDR277C MTH1 Protein is 61% identical to Msn3p M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 47 YKL079W SMY1 kinesin heavy chain homolog M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 46 YBR141C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 46 YML058W-A HUG1 induced by DNA damage and replication arrest M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 46 YMR009W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 46 YNL092W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 45 YER156C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 45 YHR178W STB5 Zinc finger (6-Cys) M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 44 YJL157C FAR1 Cdc28p kinase inhibitor M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 44 YBR196C PGI1 Glucose-6-phosphate isomerase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 43 YOL020W TAT2 Tryptophan permease, high affinity M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 43 YKL185W ASH1 probable purine nucleotide-binding protein M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 42 YPL036W PMA2 plasma membrane ATPase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 42 YMR104C YPK2 protein kinase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 42 YOR184W SER1 phosphoserine transaminase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 42 YOR185C GSP2 GTP binding protein, almost identical to Gsp1p M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 42 YLL051C FRE6 similar to FRE2 M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 41 YDR506C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 40 YGR203W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 40 YPR124W CTR1 Copper transport protein M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 40 YMR084W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 39 YGL120C PRP43 RNA helicase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 39 YPR116W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 39 YDR098C GRX3 Protein with glutaredoxin activity M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 39 YEL054C RPL12A Ribosomal protein L12A (L15A) (YL23) M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 38 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 38 YGL100W SEH1 nuclear pore protein M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 38 YER119C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 38 YJL155C FBP26 fructose-2,6-bisphosphatase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 37 YOL091W SPO21 involved in sporulation M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 37 YMR183C SSO2 post-Golgi t-SNARE M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 37 YLR268W SEC22 Synaptobrevin (v-SNARE) homolog M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 37 YCR032W BPH1 (putative) acetic acid export pump M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 37 YOR052C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YPR040W SDF1 Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YCR068W CVT17 lipase (putative) M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YPR134W MSS18 Involved in splicing of mitochondrial COX1 transcript M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YHR094C HXT1 High-affinity hexose (glucose) transporter M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YDL100C ARR4 resistance to arsenicals M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YDR361C BCP1 Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 36 YJR073C OPI3 Methylene-fatty-acyl-phospholipid synthase (unsaturated phospholipid N-methyltransferase) M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 35 YML002W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 35 YCR073C SSK22 protein kinase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 35 YBR205W KTR3 Putative alpha-1,2-mannosyltransferase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 35 YGR258C RAD2 homolog of xeroderma pigmentosum group G (XPG) protein, copufurifies with transcription factor, TFIIH, mRNA is cell cycle regulated and induced by DNA damage and by meiosis (different cis-sites utilized in damage and meiotic induction M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 35 YLR222C UTP13 Protein required for cell viability M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 34 YNL067W RPL9B Ribosomal protein L9B (L8B) (rp24) (YL11) M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 34 YGL017W ATE1 arginyl-tRNA-protein transferase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 34 YML013W SEL1 M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 34 YER055C HIS1 ATP phosphoribosyltransferase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 33 YJL154C VPS35 retromer complex component M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 33 YKL045W PRI2 p58 polypeptide of DNA primase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 33 YHR058C MED6 RNA polymerase II mediator subunit M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 33 YHR196W UTP9 Protein required for cell viability M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 33 YLL038C ENT4 Ent4p M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 33 YLR256W HAP1 zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 32 YMR178W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 32 YDR354W TRP4 anthranilate phosphoribosyl transferase M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 32 YOR310C NOP58 57 kDa nucleolar protein M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YCR060W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YNL222W SSU72 Nuclear zinc-finger motif containing protein. M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YNL221C POP1 Component of nuclear RNase P and RNase MRP M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YNL299W TRF5 exhibits homology to Trf4p and Top1p M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YBL010C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YBL011W SCT1 suppressor of choline-transport mutants M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YOR012W Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 31 YIL146C ECM37 (putative) involved in cell wall biogenesis M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 30 YER176W ECM32 DNA Helicase I M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 30 YBR062C Hypothetical ORF M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 30 YBR160W CDC28 M[69] C.yCGCG....ttKTTTT. Novel: No cat down 1 30 YKL141W SDH3 succinate dehydrogenase cytochrome b M[69] M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 2 79 YMR084W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 2 75 YKL086W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 2 71 YEL059C-A SOM1 involved in mitochondrial inner peptidase function M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 2 70 YPL231W FAS2 alpha subunit of fatty acid synthase M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 52 YBL033C RIB1 GTP cyclohydrolase II M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 50 YGR068C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 42 YER055C HIS1 ATP phosphoribosyltransferase M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 39 YHR204W MNL1 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 39 YHR049W FSH1 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 39 YMR274C RCE1 protease, acts on Ras and a-factor C-termini M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 39 YJR095W SFC1 mitochondrial succinate-fumarate transport protein M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 39 YEL019C MMS21 involved in DNA repair M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 39 YML071C DOR1 Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YDR296W MHR1 Involved in mitochondrial homologous DNA recombination M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YOR134W BAG7 GTPase activating protein (GAP) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YOR112W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YPR164W MMS1 sensitive to diepoxybutane and mitomycin C M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YIL126W STH1 helicase related protein, snf2 homolog M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YDR310C SUM1 nuclear protein involved in silencing M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YHL033C RPL8A Ribosomal protein L8A (rp6) (YL5) (L4A) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YGR044C RME1 zinc finger protein; negative regulator of meiosis; directly repressed by a1-a2 regulator M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YPL268W PLC1 phosphoinositide-specific phospholipase C M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YML118W NGL3 DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angel gene; homolog to ngl1 and ngl2 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YJL163C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YPL077C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YDR170C SEC7 Guanine nucleotide exchange protein for ARF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YMR198W CIK1 spindle pole body associated protein M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YGR258C RAD2 homolog of xeroderma pigmentosum group G (XPG) protein, copufurifies with transcription factor, TFIIH, mRNA is cell cycle regulated and induced by DNA damage and by meiosis (different cis-sites utilized in damage and meiotic induction M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YKL098W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YDR354W TRP4 anthranilate phosphoribosyl transferase M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 38 YLR401C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 37 YKR076W ECM4 (putative) involved in cell wall biogenesis M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 37 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 37 YOR229W WTM2 Transcriptional modulator M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 37 YMR182C RGM1 Putative transcriptional repressor with proline-rich zinc fingers M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YHR189W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YDR384C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YER004W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YOR186W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YKL096W-A CWP2 cell wall mannoprotein M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YDR061W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YNR034W SOL1 shows similarity to glucose-6-phosphate dehydrogenase non-catalytic domains; homologous to Sol2p and Sol3p M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YMR010W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YJR017C ESS1 Peptidyl-prolyl cis/trans isomerase (PPIase) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YDR334W SWR1 DEAH-box protein, putative RNA helicase M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YGL208W SIP2 component of Snf1 protein complex involved in response to glucose starvation M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YOR214C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YBR036C CSG2 contains 9 or 10 putative membrane spanning regions; putative Ca2+ binding protein (homology to EF-hand Ca2+ binding site) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YLR305C STT4 encodes a phosphatidylinositol-4-kinase, homologous to VPC34 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YDL018C ERP3 p24 protein involved in membrane trafficking M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YPL220W RPL1A Ribosomal protein L1A, forms part of the 60S ribosomal subunit M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 35 YER048C CAJ1 homologous to E. coli DnaJ M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 34 YNL199C GCR2 Transcription factor M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 33 YHR182W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 33 YGR248W SOL4 similar to SOL3 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 32 YOR012W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 32 YDR530C APA2 5',5'''-P-1,P-4-tetraphosphate phosphorylase II M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 32 YJR122W CAF17 component of CCR4 transcriptional complex M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 32 YOL020W TAT2 Tryptophan permease, high affinity M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 32 YDL078C MDH3 malate dehydrogenase M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YHR062C RPP1 Protein subunit of nuclear ribonuclease P (RNase P) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YCR023C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YGL198W Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YDR498C SEC20 membrane glycoprotein, sorted by HDEL retrieval system M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YDL109C Hypothetical ORF M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 31 YPR139C VPS66 M[70] CGCG.....GGGS. Novel: Expression Cluster 46 down 1 30 YDR246W TRS23 TRAPP subunit of 23 kDa M[70] M[71] cTGCAGGGR Novel: Phd1 down 2 83 YLR024C UBR2 ubiquitin-protein ligase (E3) M[71] cTGCAGGGR Novel: Phd1 down 2 77 YCR005C CIT2 non-mitochondrial citrate synthase M[71] cTGCAGGGR Novel: Phd1 down 2 70 YHR096C HXT5 hexose transporter M[71] cTGCAGGGR Novel: Phd1 down 2 70 YKL045W PRI2 p58 polypeptide of DNA primase M[71] cTGCAGGGR Novel: Phd1 down 2 68 YKL038W RGT1 transcriptional repressor and activator M[71] cTGCAGGGR Novel: Phd1 down 2 68 YER008C SEC3 SEC3 encodes the 144 kD and 91 kD components of the Exocyst complex; the 91 kD component is a C-terminal proteolytic breakdown product of full length Sec3p M[71] cTGCAGGGR Novel: Phd1 down 2 66 YHR094C HXT1 High-affinity hexose (glucose) transporter M[71] cTGCAGGGR Novel: Phd1 down 1 57 YOR361C PRT1 translation initiation factor eIF3 subunit M[71] cTGCAGGGR Novel: Phd1 down 1 47 YDR267C Protein required for cell viability M[71] cTGCAGGGR Novel: Phd1 down 1 47 YPL219W PCL8 cyclin (Pho85p) M[71] cTGCAGGGR Novel: Phd1 down 1 47 YHL034C SBP1 Single-strand nucleic acid binding protein M[71] cTGCAGGGR Novel: Phd1 down 1 46 YAL020C ATS1 similarity to human RCC1 protein M[71] cTGCAGGGR Novel: Phd1 down 1 46 YGR134W CAF130 CCR4 Associated Factor 130 kDa M[71] cTGCAGGGR Novel: Phd1 down 1 46 YGL037C PNC1 pyrazinamidase and nicotinamidase M[71] cTGCAGGGR Novel: Phd1 down 1 45 YCR011C ADP1 Active transport ATPase M[71] cTGCAGGGR Novel: Phd1 down 1 44 YDR120C TRM1 N2,N2-dimethylguanosine-specific tRNA methyltransferase M[71] cTGCAGGGR Novel: Phd1 down 1 44 YDR119W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 43 YER080W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 43 YGL240W DOC1 component of the anaphase-promoting complex M[71] cTGCAGGGR Novel: Phd1 down 1 43 YGR245C SDA1 Severe Depolymerization of Actin M[71] cTGCAGGGR Novel: Phd1 down 1 43 YJL010C Protein required for cell viability M[71] cTGCAGGGR Novel: Phd1 down 1 43 YDR444W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 42 YBR067C TIP1 cell wall mannoprotein M[71] cTGCAGGGR Novel: Phd1 down 1 42 YJL134W LCB3 putative plasma membrane transporter capable of transporting sphingoid long chain bases into cells M[71] cTGCAGGGR Novel: Phd1 down 1 42 YJL170C ASG7 An a-specific gene that is induced to a higher expression level by alpha factor M[71] cTGCAGGGR Novel: Phd1 down 1 42 YNL053W MSG5 Dual-specificity protein tyrosine phosphatase M[71] cTGCAGGGR Novel: Phd1 down 1 42 YER069W ARG5,6 N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase M[71] cTGCAGGGR Novel: Phd1 down 1 41 YIL145C PAN6 M[71] cTGCAGGGR Novel: Phd1 down 1 41 YBR201W DER1 involved in degradation in the ER M[71] cTGCAGGGR Novel: Phd1 down 1 41 YGR248W SOL4 similar to SOL3 M[71] cTGCAGGGR Novel: Phd1 down 1 41 YDR273W DON1 M[71] cTGCAGGGR Novel: Phd1 down 1 41 YIL003W DRE3 Protein required for cell viability M[71] cTGCAGGGR Novel: Phd1 down 1 41 YIL002C INP51 phosphatidylinositol 4,5-bisphosphate 5-phosphatase M[71] cTGCAGGGR Novel: Phd1 down 1 40 YER089C PTC2 Protein phosphatase type 2C M[71] cTGCAGGGR Novel: Phd1 down 1 40 YBL086C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 39 YGR053C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 39 YGR052W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 39 YOR106W VAM3 member of the syntaxin family of proteins; predicted C-terminal TMD M[71] cTGCAGGGR Novel: Phd1 down 1 39 YMR280C CAT8 Zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p M[71] cTGCAGGGR Novel: Phd1 down 1 39 YKR015C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 38 YGR108W CLB1 G(sub)2-specific B-type cyclin M[71] cTGCAGGGR Novel: Phd1 down 1 38 YGR109C CLB6 B-type cyclin M[71] cTGCAGGGR Novel: Phd1 down 1 38 YOR246C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 37 YFL006W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 37 YMR201C RAD14 human xeroderma pigmentosum group A DNA repair gene homolog M[71] cTGCAGGGR Novel: Phd1 down 1 37 YMR200W ROT1 putative membrane protein M[71] cTGCAGGGR Novel: Phd1 down 1 37 YPR035W GLN1 glutamine synthetase M[71] cTGCAGGGR Novel: Phd1 down 1 37 YCL014W BUD3 involved in bud site selection M[71] cTGCAGGGR Novel: Phd1 down 1 37 YCL011C GBP2 Protein with RNA recognition motifs M[71] cTGCAGGGR Novel: Phd1 down 1 37 YNL243W SLA2 transmembrane protein M[71] cTGCAGGGR Novel: Phd1 down 1 37 YDR153C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 37 YDR152W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 37 YDR176W NGG1 transcription factor; genetic and mutant analyses suggest that Ngg1p (Ada3p) is part of two transcriptional adaptor/HAT (histone acetyltransferase complexes, the 0.8 MD ADA complex and the 1.8 MD SAGA complex M[71] cTGCAGGGR Novel: Phd1 down 1 36 YDR086C SSS1 endoplasmic reticulum protein that is part of the Sec61 trimeric complex and the Ssh1 trimeric complex M[71] cTGCAGGGR Novel: Phd1 down 1 36 YPL220W RPL1A Ribosomal protein L1A, forms part of the 60S ribosomal subunit M[71] cTGCAGGGR Novel: Phd1 down 1 36 YJL210W PEX2 CH3HC4 zinc-binding integral peroxisomal membrane protein M[71] cTGCAGGGR Novel: Phd1 down 1 36 YGR241C YAP1802 member of clathrin assembly polypeptide AP180 family M[71] cTGCAGGGR Novel: Phd1 down 1 36 YLR412W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 36 YGR031W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 36 YIL132C CSM2 Protein required for meiotic chromosome segregation M[71] cTGCAGGGR Novel: Phd1 down 1 36 YGR040W KSS1 MAP protein kinase homolog involved in pheromone signal transduction M[71] cTGCAGGGR Novel: Phd1 down 1 35 YPL180W SHD7 Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 35 YLR248W RCK2 Serine/threonine protein kinase M[71] cTGCAGGGR Novel: Phd1 down 1 35 YCL029C BIK1 Microtubule-binding protein M[71] cTGCAGGGR Novel: Phd1 down 1 35 YBR086C IST2 Probable transmembrane protein M[71] cTGCAGGGR Novel: Phd1 down 1 35 YDR329C PEX3 48-kDa peroxisomal integral membrane protein M[71] cTGCAGGGR Novel: Phd1 down 1 35 YBR039W ATP3 gamma subunit of mitochondrial ATP synthase M[71] cTGCAGGGR Novel: Phd1 down 1 35 YPR007C SPO69 Required for sporulation; highly induced during sporulation M[71] cTGCAGGGR Novel: Phd1 down 1 35 YIL123W SIM1 (putative) invovled in control of DNA replication M[71] cTGCAGGGR Novel: Phd1 down 1 34 YDR069C DOA4 ubiquitin isopeptidase M[71] cTGCAGGGR Novel: Phd1 down 1 34 YDR068W DOS2 Product of gene unknown M[71] cTGCAGGGR Novel: Phd1 down 1 34 YBR127C VMA2 vacuolar ATPase V1 domain subunit B (60 kDa) M[71] cTGCAGGGR Novel: Phd1 down 1 34 YDL147W RPN5 Subunit of the regulatory particle of the proteasome M[71] cTGCAGGGR Novel: Phd1 down 1 34 YBR202W CDC47 MCM3 protein homolog (S. cerevisiae) M[71] cTGCAGGGR Novel: Phd1 down 1 34 YOR262W Protein required for cell viability M[71] cTGCAGGGR Novel: Phd1 down 1 34 YDL205C HEM3 phorphobilinogen deaminase (uroporphyrinogen synthase), the third step in heme biosynthesis M[71] cTGCAGGGR Novel: Phd1 down 1 34 YDL206W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 34 YNL299W TRF5 exhibits homology to Trf4p and Top1p M[71] cTGCAGGGR Novel: Phd1 down 1 34 YER085C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 34 YDR294C DPL1 dihydrosphingosine phosphate lyase (also known as sphingosine phosphate lyase) M[71] cTGCAGGGR Novel: Phd1 down 1 34 YGR179C OKP1 Outer Kinetochore Protein M[71] cTGCAGGGR Novel: Phd1 down 1 34 YEL027W CUP5 vacuolar ATPase V0 domain subunit c (17 kDa) M[71] cTGCAGGGR Novel: Phd1 down 1 34 YGL228W SHE10 lethal when overexpressed M[71] cTGCAGGGR Novel: Phd1 down 1 34 YIL126W STH1 helicase related protein, snf2 homolog M[71] cTGCAGGGR Novel: Phd1 down 1 34 YGR162W TIF4631 mRNA cap-binding protein (eIF-4F), 150K subunit , highly homologous to Tif4632p, homologs of mammalian p220 M[71] cTGCAGGGR Novel: Phd1 down 1 34 YBR121C GRS1 Glycyl-tRNA synthase M[71] cTGCAGGGR Novel: Phd1 down 1 34 YBR160W CDC28 M[71] cTGCAGGGR Novel: Phd1 down 1 34 YER066W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 33 YPR159W KRE6 potential beta-glucan synthase M[71] cTGCAGGGR Novel: Phd1 down 1 33 YMR251W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 33 YOR048C RAT1 RNA trafficking protein; transcription activator M[71] cTGCAGGGR Novel: Phd1 down 1 33 YGR161C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 33 YGR193C PDX1 Protein X component of mitochondrial pyruvate dehydrogenase complex M[71] cTGCAGGGR Novel: Phd1 down 1 33 YMR104C YPK2 protein kinase M[71] cTGCAGGGR Novel: Phd1 down 1 33 YAL039C CYC3 cytochrome c heme lyase (CCHL) M[71] cTGCAGGGR Novel: Phd1 down 1 33 YNL168C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 33 YER140W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 33 YGL254W FZF1 putative transcription factor, has five zinc fingers M[71] cTGCAGGGR Novel: Phd1 down 1 33 YGR049W SCM4 suppressor of cdc4 mutations M[71] cTGCAGGGR Novel: Phd1 down 1 33 YHR008C SOD2 Manganese-containing superoxide dismutase M[71] cTGCAGGGR Novel: Phd1 down 1 33 YJL106W IME2 Serine/Threonine protein kinase, positively regulated by IME1 M[71] cTGCAGGGR Novel: Phd1 down 1 33 YEL046C GLY1 Threonine Aldolase M[71] cTGCAGGGR Novel: Phd1 down 1 32 YBR128C APG14 involved in autophagy M[71] cTGCAGGGR Novel: Phd1 down 1 32 YLL038C ENT4 Ent4p M[71] cTGCAGGGR Novel: Phd1 down 1 32 YMR321C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 32 YJL008C CCT8 Component of Chaperonin Containing T-complex subunit eight M[71] cTGCAGGGR Novel: Phd1 down 1 32 YOR104W PIN2 M[71] cTGCAGGGR Novel: Phd1 down 1 32 YOR033C EXO1 exonuclease M[71] cTGCAGGGR Novel: Phd1 down 1 32 YHR189W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 32 YGL087C MMS2 Similar to ubiquitin conjugating protein family M[71] cTGCAGGGR Novel: Phd1 down 1 32 YKL056C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 32 YBR085W AAC3 mitochondrial ADP/ATP translocator M[71] cTGCAGGGR Novel: Phd1 down 1 32 YBR085C-A Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 32 YPL140C MKK2 protein kinase M[71] cTGCAGGGR Novel: Phd1 down 1 32 YLL022C HIF1 interacts with histone acetyltransferase M[71] cTGCAGGGR Novel: Phd1 down 1 32 YNL015W PBI2 Proteinase inhibitor that inhibits protease Prb1p (yscB) M[71] cTGCAGGGR Novel: Phd1 down 1 31 YIL049W DFG10 involved in filamentous growth M[71] cTGCAGGGR Novel: Phd1 down 1 31 YMR205C PFK2 phosphofructokinase beta subunit M[71] cTGCAGGGR Novel: Phd1 down 1 31 YDR174W HMO1 35 kDa protein belonging to the high mobility group (HMG) fanily of proteins M[71] cTGCAGGGR Novel: Phd1 down 1 31 YDR175C RSM24 mitochondrial ribosome small subunit component M[71] cTGCAGGGR Novel: Phd1 down 1 31 YGR013W SNU71 U1 snRNP protein M[71] cTGCAGGGR Novel: Phd1 down 1 31 YCR023C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 31 YJL089W SIP4 shows homology to DNA binding domain of Gal4p, has a leucine zipper motif and acidic region; lexA-Sip4p activates transcription M[71] cTGCAGGGR Novel: Phd1 down 1 31 YEL020C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 31 YEL020W-A TIM9 mitochondrial inner membrane translocase M[71] cTGCAGGGR Novel: Phd1 down 1 31 YKR085C MRPL20 22.3 kDa mitochondrial ribosomal large subunit protein YmL20; homologous to L17 of E. coli M[71] cTGCAGGGR Novel: Phd1 down 1 31 YER055C HIS1 ATP phosphoribosyltransferase M[71] cTGCAGGGR Novel: Phd1 down 1 31 YGR096W Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 31 YGR088W CTT1 cytoplasmic catalase T M[71] cTGCAGGGR Novel: Phd1 down 1 31 YMR183C SSO2 post-Golgi t-SNARE M[71] cTGCAGGGR Novel: Phd1 down 1 31 YJR077C MIR1 Product of gene unknown M[71] cTGCAGGGR Novel: Phd1 down 1 31 YNL102W POL1 DNA polymerase I alpha subunit, p180 M[71] cTGCAGGGR Novel: Phd1 down 1 31 YOR222W ODC2 M[71] cTGCAGGGR Novel: Phd1 down 1 30 YNL166C BNI5 bud neck protein M[71] cTGCAGGGR Novel: Phd1 down 1 30 YPR003C Hypothetical ORF M[71] cTGCAGGGR Novel: Phd1 down 1 30 YPR002W PDH1 prpD homolog (ie the propionate operon of many prokaryotes and specifically, the gene called prpD in that operon) This gene may be regarded as *real* in yeast by two criteria: it has close homologs (some known to be essential for propionate utilization) in numerous prokaryotes (several of these homologs are called prpD), and it is transcribed in yeast. M[71] cTGCAGGGR Novel: Phd1 down 1 30 YJR072C Protein required for cell viability M[71] cTGCAGGGR Novel: Phd1 down 1 30 YLR445W Hypothetical ORF M[71]